Haliotis rufescens (red abalone): 124135042
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Entry
124135042 CDS
T07893
Name
(RefSeq) WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124135042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrf03009
]
124135042
Ribosome biogenesis [BR:
hrf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124135042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
124135042
NCBI-ProteinID:
XP_048245005
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MATTMPHVDIVDDKPIVCLRAGESIVQTKPVFSHDTKCLFCGSGSAVKVYSTESGECVRE
LQAHTDKVTCLMLNPANKLQLISSGLDAQVFFWDYIDGVMLKSYTFPQPLFGLVSVKISG
GQFYFHVLQSSPRKQCFKEGQVVGYKGVSKDLKATIQGVIFESCALDAKTVDMGQKDDYF
AGVSTNRKELLIHYNKKCIKYKMQYVEITCVSAHPTELSLATGCSDGKIYYWYSFTNERQ
MVKSVYHWHALAVLDLTFSPEGSFLLSGGHECTLVKWQYETHYKDFKPRLGSPITHVTCA
PDNLLYAVSHQDNGIHLLRNTLDICQIYQGLTKTSFSHGNPVGLLCDPRSRALVTNGRPG
HLQFYCLHNDRQLFNLDIVRQNYISSENLEQPLTVTQITKAAIDERGDWLATYELWDDGE
MSPEMQLKFWHYDEKKQSYEMNTVVDRPHDKALCSLTFRPYNSSIRSMLPLVVSGGQDCR
FKLWTLVDDTDIYRFNSKWTCDSVGFYREMDTGATAFAEDGSLLAVVFGSTITLWDPDTN
VLRTTFSSSFDKKNVRQVLFGRKSCCHLLVATTAWQLTVWNLLTCSVQWSVSIGAVVLVD
DPLTKYMSVFTHTGDLHVFEPANSQPVFTQTQVSKNDVVSAVFIPHKEESPFSAKGRLLW
QRQSQLYFMTKEQDLLTVQYDATENSTDGYIKKTPIKQNLPQSALSLLMSKHRKSGAKDR
KHEHIDMSVGIKETQFIQQMCSMSATAQPPLPDFCQAFLETRLSKGTAPRAEAMVIDDED
DDIDDIDSGLQLNINADSDSDMEVTERSRPPSRKKESSENLSHSDVDTKKLDLALGKEYR
WFESLVKP
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaccatgccgcacgtggatattgttgacgacaagcctatcgtgtgtttacgt
gctggtgaaagcatcgttcagacaaaacctgtattttctcatgatacaaaatgtctgttc
tgtgggtcgggcagcgcagtaaaggtgtacagcacggagagtggggagtgtgtccgcgag
ctgcaggctcacacagacaaagtgacatgtctgatgctgaatccagccaacaagctacag
ctgatctcaagtggccttgatgcccaggtgttcttctgggactacatcgatggcgtcatg
ctcaagagctatacatttccgcagccattgtttggtcttgtgagtgtgaagatcagtgga
ggccagttttatttccatgtactgcagtccagtccgagaaaacagtgtttcaaagagggt
caagttgtcgggtacaaaggagtgtcgaaggacctgaaagccacaatacaaggtgtcatc
ttcgagagttgtgcccttgacgccaagaccgtggacatgggacagaaggatgactatttt
gctggagtatcaacaaacagaaaagaacttttaattcactacaataagaaatgtatcaaa
tacaagatgcagtatgttgagatcacttgtgtgtcagcccaccccacagaactgtccctg
gctactggctgctccgatggcaagatatactactggtacagtttcaccaatgagaggcag
atggtgaagtctgtctaccactggcatgccctggctgttctggacctcacattctcacct
gaaggctccttcttgctgagtggaggccacgagtgcacactggtcaagtggcagtacgag
actcactacaaggacttcaagccccggctgggatcccccatcacccacgtcacatgtgcc
cctgacaacctcctgtacgctgtgtcacatcaggataatggtatccatctgttgaggaac
accctggatatctgccagatctaccaggggctcaccaagacaagcttctcccacggaaac
cctgttggcctgctctgtgaccccaggtccagggctctagtgaccaatggaagaccagga
cacttacagttctactgtctccataacgacaggcaactgtttaaccttgatattgttcgt
caaaattacatctcctcggagaatctggagcagcctctgacagtcacccagatcacgaag
gccgcaatagacgagcgtggtgactggctggccacttatgaactgtgggatgacggggag
atgtcgcccgagatgcagctcaagttctggcattatgatgagaagaagcagagctacgag
atgaacacggtcgtggaccgaccccacgataaggcgctctgctccctgacattccgcccc
tataactcctccatcaggtctatgctgccactagtcgtgtccgggggacaagactgcagg
ttcaaactgtggacgcttgtggacgacaccgatatctacaggttcaacagcaagtggacg
tgtgactcggtcggcttctaccgtgagatggataccggagcgacagcattcgcagaagat
ggatccctcctggccgtggtgttcggctccaccatcacactgtgggacccggatactaac
gtcctcaggactactttcagtagcagctttgacaagaagaatgtcaggcaggtgttgttt
ggccgcaagtcctgctgtcacctgctggtcgccaccacggcatggcagctcacagtgtgg
aaccttctcacatgctcagtccagtggagtgtgtctataggggcggtggtgctggttgac
gacccactgaccaagtatatgtctgtgtttacacacactggggatcttcatgtgttcgag
ccagccaattcccagccggtcttcactcagactcaggtttcaaagaacgacgttgtcagt
gctgtttttatacctcacaaagaggaaagtccattcagtgccaaggggagactactatgg
cagagacaatcacagctgtacttcatgacaaaagagcaagatctccttacagtgcagtat
gacgccactgagaacagcactgatgggtatataaaaaagaccccaataaaacagaacctg
ccccagtcagctctcagcctgctcatgtccaaacacaggaagtctggcgccaaggatcgg
aaacatgagcacatcgacatgtctgtgggcatcaaggagacacagttcattcaacagatg
tgcagtatgtcagcaactgcccagcctccactaccagacttctgccaggcgttcctggag
acccggctgtctaaaggaaccgcacccagggctgaagcgatggtcatagatgacgaagat
gatgatattgatgatattgacagtggactacagttgaacattaatgctgattcagactcg
gacatggaggtcacagaaaggtcaaggccaccttccagaaaaaaggaatctagtgaaaat
ttatcacattcagatgtggacacgaaaaaattggatcttgctttgggtaaagaataccga
tggtttgaaagtttagtcaagccatga
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integrated database retrieval system
