Haliotis rufescens (red abalone): 124135213
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Entry
124135213 CDS
T07893
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03013
Nucleocytoplasmic transport
hrf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124135213
09122 Translation
03013 Nucleocytoplasmic transport
124135213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124135213
03041 Spliceosome [BR:
hrf03041
]
124135213
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124135213
Spliceosome [BR:
hrf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124135213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
124135213
NCBI-ProteinID:
XP_046356426
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MSKELDVKDKKKKRLLKPEITSSSPDMKKTKSIDSLASKEPILFHMEEEEEVDSHDPHDD
LGVFKTSCDIMRASVSDINKLKQNKEANAEELEEKRINASLQFVVLKKLNRLAHFRCRKV
REGTSEAKQRIDQYHLQLQNLLYEAMHLQKEITKCLEFKSKDEEIELVSVGDFYKEAPAD
ISKPELTKKDKHQRTLARLDWELEQRKQLASKLKEAQTQREDITQEIKTKQDHLESLQPK
LQSILQATKPVQGYLGMQYDEVCEQHETAYHLPRPLYVLYMQASAYKEACDTQLKVTIEG
DIDAARSLVTTATPDLDEESDSDQEEQETSKSKRRRKTVEARQTDKKAKVLRKHPLSVIL
DVTTRDGSSLHLTFHYLLVLQIITVNVKVNCGPDTITNSISGGDLLSLDSILNELYPGDH
GKTTPNQANQYELVKQGMHEFSEYLCEVGRPYMWAQWLGGLQFLGDNGLEKAKSSVSASY
MQQTIKKLRRRIKSRLSLLQQLASLERNSIPVSSDVLKNFPAKILSHVTSWQRSTFEDFA
SLPYTRSAISTDMARETDMFFTLTMERGSAKLTSQVIITPDYPAVAPMFVVNITWQTDRN
AGNDIHVKELEEEVNIHYEELVGRKSQGQLLSNQLQRLLMCFDVYLETESHDVSSPVEIP
KEKVFPRTARGPNRKKPYRYMPDLSIFIQR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaattagacgtaaaggataagaagaagaagcggctcttgaaaccagagatt
acatctagcagcccagacatgaagaagacaaagtcgatcgacagcctggcgtctaaggag
ccgatactgttccacatggaggaggaggaggaggtggacagccatgacccacacgatgac
ctcggagtcttcaagacctcctgtgacatcatgagagcttcagtctcggacataaacaaa
ctgaagcagaacaaagaggctaatgcagaagaattagaggagaagagaatcaatgcaagt
ctgcagtttgttgtcctgaagaaactgaaccgtcttgctcacttccgttgtcgcaaggtc
cgagaggggaccagtgaggccaagcagaggatcgaccagtaccacctgcagctgcagaac
ttgctgtatgaagccatgcacctccagaaggagatcaccaagtgtctcgagttcaagtca
aaggacgaggagattgagctggtatcagtgggagacttctacaaggaggcgcctgcagac
atctccaaaccagagctgactaagaaggacaaacatcaacggaccctggccaggctagac
tgggagctggaacagaggaaacaactggcctccaagttgaaggaggctcagactcagaga
gaggacatcacgcaggagatcaagaccaagcaggaccacctcgagagtctccagcccaag
ctgcagtccatactacaggccacaaagccagtgcagggctaccttgggatgcagtacgat
gaagtgtgcgagcagcacgagacagcataccaccttccccgaccactgtatgtcttgtac
atgcaggccagcgcctacaaggaggcttgtgacacacagctgaaagtgaccatagaagga
gatattgatgctgcaaggtctcttgttaccacggcgacaccagacctagatgaggagagt
gacagcgatcaagaggagcaggagacatcgaaatcgaagcggaggaggaagacggtggaa
gcaaggcagacagacaagaaggcgaaagttctccgcaaacacccgctgtctgtcatactg
gatgtcacaacaagagatggcagcagtctccacctgaccttccactacctactggtcctc
cagatcatcactgtcaatgtcaaggtcaactgtggtccggacaccatcaccaactccata
tcaggaggggacctgctgtctctggactccatcttaaatgaactctaccctggtgaccat
ggcaaaaccacgcccaatcaggccaaccagtatgaactggtcaaacaagggatgcatgag
ttcagtgagtacctgtgcgaggtgggacggccctacatgtgggcgcagtggctggggggt
ctgcagttcctgggagacaacggcttggagaaggccaagagttctgtgagtgccagctac
atgcagcagaccatcaagaagctacggcgtcggatcaagtcacgtttgtcactgctgcaa
cagctggcttccctcgagcggaactctatcccagtcagcagtgatgtcttgaagaacttt
cctgccaagattctgtcccatgtgacgtcatggcaacggtcgacattcgaggactttgca
tccttgccatatacacggtcagctatttctaccgacatggcgcgagagacggacatgttc
ttcaccctgactatggagcggggatcagccaagctgacttcgcaagtgatcatcacgccc
gactaccccgctgtggcacccatgtttgttgtcaacatcacctggcagacggaccgcaat
gctggcaatgacattcatgtcaaggagctggaggaggaggtcaacatccactacgaggag
ctggtgggaaggaagtcacaaggtcagctgctgtccaatcagcttcagcgtctcctcatg
tgttttgacgtctacctggagaccgagtcacatgatgtgtcctcacctgtggagatcccc
aaggagaaggtgttcccccggacagctagaggccccaacaggaagaagccctatcgctac
atgccggatctcagcatttttatacagcggtag
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integrated database retrieval system
