Haliotis rufescens (red abalone): 124135690
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Entry
124135690 CDS
T07893
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124135690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124135690
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
124135690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_2
TPR_14
TPR_1
TPR_17
TPR_8
TPR_11
TPR_12
ANAPC3
TPR_9
PPTA
TPR_15
MUS81-like_WH
Coatomer_WDAD
Retrotran_gag_2
SNAP
Motif
Other DBs
NCBI-GeneID:
124135690
NCBI-ProteinID:
XP_048251765
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MDSKEVKNALKNAREAIRNKEFKEARRHCKTVLASDKTNYNALVFVGVAAEGLEQADKAL
KAYKKAIDAAPEQILAWQGLCGFYEKNPSPENDADLASVYKKLMSLQASDKEKMLDIGRK
LAQLHGKLGNVDEAVSMYRHVLSEDQAGQQRMNALMSLFDVLHGQKTLSTEYQELMLKTC
KEAVSLEDLPAEGSERLIQQFLELLVKHGPRSSLWEECRSLHDRYPANLYVLETWTLLLL
EENLQGSDDRVSSTLRDVSQKLGALSASSPYVSLSQGVIQLADQKLVEARDLLQQGMNSL
TSVVSGYVFLARCHQQLHTDMACVEIADKGLKALEKKNRLLTLPSKSITCELQLLKATCL
YRVGSPHCLAQAREILSQDVIESPESRSLLVYICLKQGNIADAQHHLGDVPETDGEREAL
RGRILFHTGQHQEALTRFEKLTEDAPGVSGHQYMLGRVLWQLRDTEGQDGVQERCFKAFL
KAAKLDPYNSDIFLYLGHFYATVQKENVKAKRCYQKAYDLDPANEEAGAALCDILVAIGE
DEEAKALLEAATSQANAGCGKWAWLRLGLYQVRHDDPTIAVASFQAALRADPRDNHVWEC
LAEAYLHRGSYTAALKTFTKAAELNPESVYSLFQIASIKQTLGEYPEAVAEYKTILEKSH
NYVPALKGLGETLLLLARQHLTTCLDGLARDKCQEALVYLTRAASQRADLSCLWKLMGDA
CTVLQPLAPETFSLQLPAKLVQQSSQDIVSLGKMEVLQVGARCYGRALKSIPESASLWHD
LGVNYFHQSELSTSASVELSQKAIQALKKAISLDPNNFRHWNALGVVVCAKYCYKPELAQ
HCFIKSIEVESNNVVAWTNLGTLYLKNDNVQLAHEAFKVAQSLDPSYVACWIGQALIAEI
VGHDDAMDLFRHTTELGTNVEGAMGYASWVCQVLQDRSKRNTDLFRYSIKQMAAIPAASD
ALARYTGRVKTDMAAYNMYGLLLEHQKLYSGAAEAFRSAVEILEKDSTQTEQLGKVRINY
GRVLCKGGNYKESVEQLGKAGSLEKCEDLCFLGLAHYKLGRFEDSYQAYNMALGMAELDE
DKSHIYSALGMVAYRFGDVEGAKTALFNGSQQAPPSALGLQALCSLGLLQSDATLATAAI
QELFKLGDKDPSLPDVTWLSAAVCILQGNLKEAKRSIQRVIQKNPSCPRLWRVLSSILSS
FFPDLGDAASHCARASQDLAHSEDKSVSTLLTVGQLQGGLHSRCDTRNNALSSAQKALHL
YPDKVSNQCSLIAAVHAEAVLSGDERRRQLLNIEQQRIQGMLESEHSPQPGVALWCWRQR
VVSLVLSNKGSEAKEALQQLSCLPTATDSSGLFAEVLEGALTDDLQAVQGKVCMEGRQLY
LWQVLTEMYLQKGLMAEADTTIRHTLQLAQADSQRQVQLESLLKLASLSYQQIMSGSGDK
QQLRSVFDEAAAEVLKIDPGCSAVLLMMGALSIKSNKVSRRHYQRALIAGSVRSSRGHDV
SLARQAVIRNIIYSQKDLPLAKKIADEAVCDGDEATVNLYSQLKGDED
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaggaagtaaagaacgctttgaaaaatgcaagggaggcaattcggaataaa
gaatttaaggaagcacgccgacattgcaagacagtgctagctagtgacaagaccaactac
aatgccctggtgtttgtgggcgtggctgctgagggtctggagcaggctgacaaggcactg
aaggcttacaagaaagccatagatgcagcacccgagcagattctagcatggcagggtctg
tgtgggttttacgagaagaacccatctcccgaaaatgatgctgacctggccagtgtgtac
aagaagctgatgtctctacaggctagtgacaaggagaagatgctggacatagggaggaaa
cttgcccagcttcatgggaaactggggaatgtggacgaggctgtgagcatgtaccggcat
gtgctgtccgaggaccaggctggacagcagcgcatgaacgcactcatgtctctgtttgat
gtcctacatggtcagaagactctctctactgaatatcaagaactgatgttgaagacatgc
aaggaggcagtatcattagaagatctgccggcagagggcagtgagagactgatacagcag
ttcctggagctgctggtcaagcatggtccccggtccagcttgtgggaagagtgtcgaagc
ctccatgaccggtaccctgccaacctctatgtcctggagacctggactctgttgctgctg
gaggagaacctccagggttctgatgacagagtcagctccactctgagggatgtgtctcag
aaacttggagctctatcagccagcagcccatatgtgagtctgtcccagggagtgattcaa
ctggcggaccagaagctggtggaggccagagacctcctgcagcaaggaatgaacagcctc
acgagtgttgtgagtggctatgtgttcttagccagatgtcaccagcagttacacacagac
atggcatgtgttgaaatcgctgataaaggactgaaggcactagagaagaagaaccgccta
ttgacattgcccagcaaatccatcacctgtgaactccagctcttgaaagccacctgtttg
tacagagttggttcaccccactgtctggcacaggcaagggagatcctgtcacaggatgtg
attgaaagtccagagtctagaagcctcctggtatacatttgtctgaagcaagggaatata
gcagatgcacagcaccacctgggcgatgtgccagagactgatggtgagagagaggccctc
cgtggccggatcctgttccacacaggccagcaccaggaggctctcacacggtttgagaag
ctgactgaggacgcccccggtgtgagtggacaccagtacatgctggggcgagtcctgtgg
cagctgcgagacaccgaaggccaggatggggtgcaggagagatgtttcaaggcctttctt
aaggcagccaaacttgacccctacaatagtgacatattcctctacctgggacacttctac
gccactgtgcagaaggagaatgtaaaagccaagcgttgctatcagaaggcgtacgacctt
gaccctgctaatgaggaggctggagctgcactctgtgacatcttggtcgccattggtgaa
gatgaggaagccaaggcccttctggaggctgccacaagtcaggccaatgctggctgtggc
aagtgggcctggctgaggctaggtctgtatcaggtgcgacatgacgaccccaccatcgcc
gtggcatcattccaggcggctctcagagcagacccccgagacaaccatgtgtgggagtgt
ttggccgaggcttacctgcaccgggggagctacacagcagctctcaagacgttcacaaag
gcagctgagttgaacccagaatcagtgtacagtctcttccaaattgccagcattaagcag
accctaggagaataccccgaggctgtggcggagtacaagaccatcctggagaagtcccac
aactatgtgccagcactcaaaggtcttggtgaaaccctgttgctgttggcacggcaacac
ttgaccacctgtctggacggcctggctcgggacaagtgtcaggaggccttggtttatctg
accagagctgcgtcccagcgtgcggacctgtcctgcctgtggaagctgatgggggacgcc
tgtactgtgctgcagcctctggccccggagacattcagtctgcagcttcctgccaagctg
gtccagcagtcgtcccaggacatagtgtccctggggaagatggaggtcctgcaggttgga
gccaggtgctatggtagagccttgaagagcattccagagagtgcctctctctggcatgac
ctgggggtcaactatttccaccaatcagagctgtccacatcagcatcagtagagctatcc
cagaaagccattcaggccctgaagaaagctataagtctggaccccaacaacttccgccac
tggaatgccctgggggtagtggtatgtgccaaatactgctacaagccagagctcgcccag
cactgcttcatcaagtccatagaagtggagagtaacaacgttgttgcctggaccaacctg
ggaacattgtacctgaagaatgataatgtgcaacttgcccatgaagctttcaaagtagcc
cagagtcttgacccaagttacgttgcttgctggattggacaggccctgatagctgagata
gttggacatgatgacgccatggacctgttccgtcacacaaccgaactaggcactaatgtt
gagggagccatgggctacgccagctgggtatgccaggtactgcaggatcgcagcaagagg
aacaccgatctgttccggtacagcatcaaacagatggccgccatccccgctgcatcggat
gctctggccagatacacaggtcgtgtgaagacagacatggcagcgtacaacatgtacggt
ctgctcctggagcatcagaagctgtacagcggcgcggccgaggccttcaggagtgctgtg
gagatcctggagaaggactcgacccaaactgagcagctgggtaaagtcaggatcaactac
ggaagagtcctatgcaagggaggtaactacaaggaatcagtggaacagttggggaaggcc
ggaagtctggagaagtgtgaggacctgtgtttccttggcctggctcactacaagctgggc
agattcgaggacagctaccaggcctacaacatggcccttggtatggctgagctggatgag
gacaagtcccacatctactccgcactaggcatggtggcctacaggttcggtgatgtcgag
ggtgccaaaacagcactgtttaatggatcccagcaggctcctccgtcggctctagggctc
caggctctgtgctcgctagggctgctgcagtctgacgccaccctcgccacggcagccata
caggaactcttcaagctgggagataaagatccatcactaccagacgtcacctggctgtct
gctgctgtgtgtatactgcagggtaatcttaaagaggccaagcgttctattcagagagtt
attcagaagaacccatcctgtccgcggttatggcgagtgttgtcttccatactgtccagt
ttcttcccggacctgggagacgcagcatcccactgtgcacgggcctcacaggatctcgct
cactctgaagacaagtcggtgtccactctgttgaccgtaggtcagctccagggcggactc
cacagcaggtgcgacacacggaacaatgctctgtcctctgcgcagaaggctctgcacctc
tatccagacaaggtgtccaatcagtgcagtttgatcgcagctgtccatgctgaagctgtg
ctgagtggtgatgagagacgacgtcagcttctgaacatagagcagcagcgtatacaagga
atgctggagtctgaacactcccctcagcctggagtggcactctggtgctggagacagagg
gtcgtcagtctggtactcagtaacaaagggagcgaggccaaggaggcactccagcagtta
tcctgtctaccgactgccacagacagctcaggactgtttgctgaggtccttgaaggagcc
ttgacagatgacctccaggccgttcaagggaaggtctgcatggaggggagacaactctat
ctgtggcaggtactgacggagatgtacctgcagaaggggctgatggcggaggcagacact
accatcagacacactctgcagctggcccaggccgacagtcagcgacaggtgcagctggag
tcactcctcaagttggcctctctgtcgtaccaacaaatcatgtcaggaagcggggacaag
caacagctgcggagtgtgtttgacgaggcggccgctgaggttctcaagattgatcctggc
tgctcggcagtgctgctgatgatgggagcgctgtccatcaagagtaacaaagtttctcgt
cgacactaccagcgggctctgattgcagggtcagtcaggtcaagtagaggtcatgatgtc
tctctggctcgtcaagctgtcataaggaacatcatctactcccagaaggatcttcctcta
gctaagaaaattgctgatgaagcagtttgtgatggcgatgaggcaacagtgaacctctac
tcccagctcaaaggggacgaagactga
DBGET
integrated database retrieval system
