Haliotis rufescens (red abalone): 124135773
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Entry
124135773 CDS
T07893
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03030
DNA replication
hrf03410
Base excision repair
hrf03420
Nucleotide excision repair
hrf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124135773
03410 Base excision repair
124135773
03420 Nucleotide excision repair
124135773
03430 Mismatch repair
124135773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrf03032
]
124135773
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124135773
DNA replication proteins [BR:
hrf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124135773
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124135773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
AAA_30
PTCB-BRCT
Rad17
AAA_14
AAA_16
BRCT_2
nSTAND3
RNA_helicase
RuvB_N
AAA_17
AAA_7
AAA_33
AAA_5
AAA_19
AAA_18
NTPase_1
TIP49
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-GeneID:
124135773
NCBI-ProteinID:
XP_046357278
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MDIRNFFGPVGVKKGKDTGNGEKRKQASESNRKGSRKTSADRSSRKDSGDSNKIDSKNKK
RKKESTTEEELDSEDVVHKKGKPRSKKTQRIESDSDEELMPKKNKKKKKEAVVFIDDSDE
EIEKPKKRSSLDGFVKVTPPKPKQPSMKTPEKKTPINASDFFGSSSVQRSDRKTVAAKRK
KSTERRDSSDVEMHDDDDFSKTLSQLDEEMLPHKVKKESPGKVNGEGDRSLSSKLSNRMK
TLVEDTPEKNSKKSTVIVPDTPKSGKTSPLKKPSPKRSPVRSNMVITPNKSPVKSESRKT
SPSSSSPLKTSPKSTTSPKEGTPKLVNRASYRAYLHREGPTALGSKDIPEGADNCLEGLT
FVITGVLESLEREDAKSLVEKYGGKVTGSLSKKTNYIIVGRDAGESKLNKANQFKTHQLD
EDGLLELVRTRPGKKSKYLVKAEEDAKKEKIEKQKLEKRKSEENNNVPHKKAKLSEETGK
KSSKPSPSKSKSDQSGESLLWVDKYKPTNIKQVIGQQGDKSNAKKLLGWLRQWHHNRAIG
TKPQGKFFGKDDGSGSRAALLSGPPGVGKTTTATLVCQELGFSYIELNASDTRSKKSLKE
FVAEALNNTTLVDFMGPSKAETGGHKHCIIMDEVDGMAGNQDRGGIQELVQLIKQTKIPV
ICICNDRNHQKMRTLSNYCFDLRFYKPRVEQIKGAMMSMIYKEGLKIDPPALNEIILGAN
QDVRQVIHNLCMWTATNKTLTYEQAKDDAKKAEKDYKLSPFDVCRKVFVGGEETAKMTIH
DKSDLFFNDYSFTPLFVQENYTSVIPYSARGNTARHLSALARAADSICDGDLADRKIRSA
QNWNLLPAQAIFSSVIPGEVMRGSFPQMVQFPQWLGKNSSRNKTDRIMQELRTHMRLQIS
GDLKGLNMDYLPVIRHVMTHPLVQQGGDGVREVIDFMDNYDIIKEDFDNILEVTKWPNSS
DPLSKLDSKTKAAFTRTYNKESHVTPYATGVMSKKKRGRAPIEEDDDLMGGEDRAAMAVS
SDDDDDLEADTMIKKGPASKAAGKKGGDAGGKKGGDAGGKKGKGKAGAGGKAGAGGKGRG
KS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggatataaggaatttctttggcccagttggggtgaagaaaggcaaagacactggtaat
ggtgaaaagaggaaacaggcttcagaatccaacagaaaaggctcaagaaaaacttctgct
gacagaagctcccgaaaagacagtggagactccaataaaattgacagcaaaaacaagaaa
aggaaaaaagagagcacgactgaagaggaattggattccgaagatgtggtacacaagaag
ggaaaacccagatccaagaaaactcaacggatagaatcagattcggatgaggaactaatg
ccaaagaaaaacaagaagaagaagaaggaagctgttgtcttcattgatgattctgatgaa
gaaattgagaaacccaagaagaggtcatcattagatgggtttgtgaaagtaacaccaccc
aaacctaagcaaccaagcatgaaaacaccagagaagaagacacccatcaatgcatcggat
ttcttcggcagtagctctgtgcagaggagtgatcgcaaaactgtggcagcaaagaggaaa
aagtcaactgagagaagagactccagcgatgtggagatgcacgatgacgatgacttctcc
aagactttgtcccaacttgatgaggaaatgctgccccacaaagtgaagaaagagtcgcca
ggtaaagtaaatggagaaggagacaggagtctgtcaagcaagctgtcaaatcgtatgaag
accttggtggaagacactccagaaaaaaacagtaaaaaatctactgttattgtgcctgac
acaccgaaaagtggaaagacttctccactcaagaagccatcacccaagaggtcaccagtc
aggagcaacatggtcatcactccaaacaagtccccagtgaaatcagaaagcaggaaaaca
tctccctcgtcatctagtcccttgaagacttctcccaagtctaccaccagccccaaggaa
gggactcccaagctggtgaaccgagcaagctacagggcatatctccaccgagaaggtcct
acagcccttggctccaaggacatcccagagggagctgataactgcctggaggggctgaca
tttgtcattaccggggtgctggagtcgctggaacgggaggatgccaagagtcttgtagag
aagtatggcggcaaggtcactggctcactaagcaagaaaaccaactacatcatagttggg
agggatgctggagaaagcaaacttaacaaggcaaatcagttcaagacacatcagcttgac
gaggatggcctcctggaactggttcgtacgaggccgggaaagaagtcaaagtacctggtg
aaagctgaagaagatgccaagaaggaaaaaattgagaaacaaaaattggaaaaaagaaaa
tcagaagaaaacaacaatgttccacataaaaaagcaaaactttcagaagaaactggcaaa
aaatcctcaaaaccatcaccatccaagtccaaatctgaccagtcgggagagtcgttactg
tgggtggacaaatacaaaccaaccaatatcaagcaggtcattggtcaacaaggagacaag
agcaatgccaagaagcttctcggttggctgcggcagtggcatcataacagagccatcgga
accaagccacaaggtaaattctttgggaaggatgatggatctggttcgagggcagctctt
ctctctgggccaccaggtgttgggaagaccacaacggcaacacttgtatgtcaggaactt
gggttctcctacatcgagctgaacgcatcagacacacggtcaaagaaaagcttgaaggaa
ttcgtggcagaggcactgaacaacacaacactggtggacttcatgggtccgtccaaggct
gaaacaggtggccacaagcactgtatcatcatggacgaggtggacggcatggccggcaac
caggaccggggcggcatccaggaactggtgcagctgatcaaacagacgaagatcccggtc
atctgtatctgtaatgaccgcaaccaccagaagatgcgcacgctgtccaactactgcttt
gacctccgcttctataagcccagggtggagcagattaagggagctatgatgtctatgatc
tacaaagaggggttgaagattgatccaccagctcttaacgagatcatcttgggggccaat
caggatgtccgacaggtgatccacaacctgtgtatgtggacggccacaaacaagacactc
acctatgaacaagccaaagatgatgccaagaaggcggagaaggactacaagctgagtcca
tttgatgtgtgtcggaaggtgtttgtgggtggagaggagactgccaagatgacgatccac
gacaagtcagacttgttcttcaacgactactccttcacaccactgtttgtgcaggagaac
tacacaagtgtcattccatactctgccagaggcaacacagcaagacacctgtcagcattg
gcacgggcagccgatagtatctgtgatggggatctagcggacagaaagatcagatctgct
caaaactggaacctgctccctgcacaggccatcttctccagtgtgatccccggggaggtg
atgcggggcagcttcccccagatggtgcagttcccccagtggctgggcaagaactctagc
cggaacaagactgaccgcatcatgcaggagctccgcacacacatgagactccaaatctcg
ggcgacctgaagggtctgaacatggactacctgcctgtgatccgacacgtgatgacccac
cctctggtgcagcaaggcggggacggggtcagggaggtcatcgacttcatggacaactac
gacatcatcaaggaagactttgacaacatactggaagtaacaaagtggccaaacagttcc
gatcccctcagtaaactggattccaagaccaaggcagctttcaccaggacgtacaacaag
gagtcccatgtgacaccctacgccacgggggtcatgtcgaagaagaagcgggggagggcc
cctattgaggaggacgatgacctcatgggtggtgaggacagggcagcgatggcagtcagc
tctgatgatgatgacgacctggaggcagacaccatgatcaagaaagggccggccagcaag
gcagcagggaagaagggaggagatgcaggagggaagaagggaggagatgcaggagggaag
aaggggaaggggaaggctggcgctggggggaaggctggcgccggggggaagggaagaggc
aagagctga
DBGET
integrated database retrieval system
