Haliotis rufescens (red abalone): 124135857
Help
Entry
124135857 CDS
T07893
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04140
Autophagy - animal
hrf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124135857
04148 Efferocytosis
124135857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrf04131
]
124135857
Membrane trafficking [BR:
hrf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124135857
Hops complex
124135857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
124135857
NCBI-ProteinID:
XP_046357443
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MATADWSPLGTIYYRKCELYTMEWSGLVDLSKCTVAAAPYGGPIALMRDESKSGRVTTNV
KPIISVYNTAGKLLSQLRWNSGHVIQIGWTVTEELLCVQDDGVVLVYDIFLNFKRTFGMG
QEAKDVKLLDCKIFNSFQGTGIAVMTTGFRIFLITNAEDPRVRKLAEVPGLNSLPSSWTI
INIERKSLALVAKNDQLFLVDHGGQYQEQSPEVESEVEAYVGMALSFNNKYLALFTQTGM
IWIGSSDLQKCYCEFNTKSKSPPNQLAWCGNGAVVAMWDRLMVVVGPDKDWIKYNFDSPV
SLVQEEDGLRIFGDDIHEFLQKVPAVTEQIFKIGSMEPGAMLFEASREFQKRSQKADEYV
RMIKDKLDIAVDQCIEAAGNEIEPNKQRLLLRAASFGKCFLTDYRPEAFVNMCQMLRVLN
QVRHHSVGIPLTYVQLEHLSMSVLIDRLVLRKFFCLAIKICQYLKIPDAEGTSRILAHWA
CYKVQQKHEEEDTLAKAISQKLLDVPGVSFSEIASQALDQGRKQLAIKLLEYEPKASEQV
PLLLKMDQDHTALGKAIDSGDSDLVYTVLLRLKEKLQSSGDFLMTIRTMPIAYSLYIQFC
KQQNPKLVEDLYYQEDNFLDNGNCKVVRSFQEEMLDDRLKRLEDAQNCYSRAKNDFAAKQ
TEDQIKLLKFQRRLEEEHNKPYVDLSLHQTIYKLTVEQINKPAEQLRKEFKVPEKRYWLL
RINALAEAGDWGELEKFSRTKKPPVGMEVFVEACVKLHNKQEAHRYMNRVTPDKKVKCLI
KLGNLKAAAEAAFENRNEDELNTVLSRVSLADKQLAESIRAMRNELGKK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcagattggagtcctcttggaactatatattacagaaaatgcgagttatac
actatggaatggagtggtctggtggacctgtcaaaatgtaccgtggcagcagcaccatac
ggaggacccatagctctcatgagagatgagagcaagtctggcagggtgacaacaaacgtc
aaacccatcatcagtgtttacaatactgcagggaaacttctcagtcaactcaggtggaac
agtggccacgtgatacagatagggtggacagtgacggaggagctgctgtgtgtgcaggac
gatggagttgtgttggtgtatgacatcttcctcaacttcaagaggacatttgggatgggc
caggaggcaaaggatgtgaagcttttagactgcaaaatattcaacagtttccaaggcact
ggaattgctgtcatgacgacaggattccgaatattccttatcaccaatgctgaagatccc
cgtgtcaggaagctggcagaagtcccaggactgaattctctacccagtagctggaccatt
atcaacatagagaggaagtctctagccctggttgccaagaatgaccagctcttccttgtg
gatcatggaggccagtatcaggagcagtcgccggaggtggagtccgaggtggaggcgtac
gttggcatggcgctgtccttcaacaacaagtacctggctctcttcacacagactgggatg
atatggatcggctcctcagacttacagaaatgttattgtgaattcaacaccaaatccaag
tccccgccaaatcaacttgcatggtgtggcaacggtgctgtggtagcgatgtgggacagg
ctgatggttgtggtcggaccagataaagactggatcaaatacaactttgacagcccagtc
tctctagtacaggaggaagatgggctgaggatattcggggatgatattcatgagtttctc
cagaaagtgccagctgtgacagaacaaatcttcaagatcggatccatggagccaggggcc
atgttgttcgaggcatccagggaattccagaaacgcagccagaaagctgatgaatatgtg
aggatgatcaaggacaaactggacattgcagtggaccagtgtattgaggcagcggggaat
gagattgaaccaaataaacagagattactgctgagggctgcttcatttggtaaatgcttc
ttgaccgactaccggccggaggcgtttgtcaacatgtgtcagatgctacgagtgttgaac
caagtcagacatcactctgtgggtattccgctcacatacgtacaactggagcacctgtca
atgtcggtgctgatagatcgactggttctccggaagttcttctgcctggctataaagatc
tgccagtatctgaagatcccggatgcagagggtaccagcagaatactggcgcactgggcc
tgctacaaggtgcagcagaagcatgaggaggaggacaccctggctaaagccatctcccag
aagctgctggatgtcccgggggtctccttctccgagattgccagccaggctctggaccag
ggcaggaagcagctagccatcaagctgctggagtatgagcccaaggcatcagagcaggtg
cccctgttgctgaagatggatcaggatcacacagctctgggcaaggccatcgacagtgga
gacagtgatttagtgtacacagtgctgttacgactcaaggagaaacttcagagcagtggt
gacttcctcatgacgatccgaaccatgcctattgcctactccctctatatacagttctgc
aagcagcagaaccccaagctggtggaggacctgtactaccaggaggacaacttcctggac
aacggcaactgcaaggtcgtcaggagcttccaggaggagatgctggatgacagattgaag
cgactggaagatgctcagaactgctacagcagggccaagaatgactttgctgcaaagcaa
acagaggaccagatcaagctgctcaagttccagcggcgcctcgaggaggagcataacaag
ccgtatgtggacctgtccctccaccagaccatctacaagctgacagtggagcagatcaac
aagcccgcggagcagctacgcaaggagttcaaggttccagagaaacggtactggctgctg
cgtatcaacgccctggcagaggcgggagactggggcgagctggagaagttctcacggacc
aagaagccccctgttggtatggaggtatttgttgaagcttgtgtcaaactacacaacaag
caagaagctcacagatatatgaaccgggtcactccagacaagaaggtcaagtgtctcatc
aaactggggaacctgaaggcagctgctgaagcagcatttgagaaccgaaatgaggacgag
ctgaacacagtgctgtctcgtgtcagccttgcggacaaacagttggcggagtccatccgc
gccatgaggaacgaactgggcaagaagtaa
DBGET
integrated database retrieval system
