Haliotis rufescens (red abalone): 124136144
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Entry
124136144 CDS
T07893
Name
(RefSeq) transcription factor SOX-7-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124136144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrf03000
]
124136144
Transcription factors [BR:
hrf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124136144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Sox17_18_mid
Motif
Other DBs
NCBI-GeneID:
124136144
NCBI-ProteinID:
XP_046357912
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MRQACHPPQTPGPTPAMLAGMYGNPHGPGMPHPQYQFDWVNSYTTGVMPQETTMVRMPSR
RSEQRIRRPMNAFMVWAKVERKKLADENPDIHNADLSKILGKKWKGLRVEEKRPFVEEAE
RLRVQHMQDHPDYKYRPRRRKHPKRICKRASSLTSSGDARPDSLPPVTTFGRGSTPGGGS
NMRKQMATPHTGASLSAPILSNLLNTPESSPPSSPDTSKPRNSSSPDLTDDQTGRSSANS
SHYESVLSSSGLLTPDRSPNDAGESVFKFPPHSEESRLSGSHGSSYSELLRKFSTNGNMY
ISRFRNDYTPVPTSTNLNSSSENLVTLRKLVSQPHTTMSSSFYRQKSSARMQPPCLKSNM
ATPSPYPSCQQQVAPYPQTSTHLPEGDILEKFSEVERLGDVDRSEFDQYLFGSSSQANPN
TNTFCHAGVTFKYSSVSYDQVASSPEYDPGSSDVSHVVEHGDDMSPDYEVAYQYDFDGSC
LISALTNSPSF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaagcgtgtcacccaccccagactcccggacccaccccagcgatgttggcaggg
atgtatggcaacccccacgggccaggcatgccccacccccagtaccagtttgactgggtg
aacagctacaccacgggggtgatgccccaagaaactaccatggttcgaatgccctccaga
agatctgagcaaagaatccgaagacccatgaatgcatttatggtttgggcaaaagtcgaa
agaaagaagcttgcagatgaaaaccccgacatacacaacgcagatctcagtaaaattcta
ggaaagaaatggaagggccttcgtgtagaagagaagcggccatttgtcgaggaggcagag
aggttgagagtccagcatatgcaggaccacccagactacaagtacagaccccggaggcga
aaacatcccaagagaatctgcaagagggcgtcatctctcacgtcatccggcgatgctaga
cctgacagcctccctcccgtcacgacgttcggtcgggggtccacgcccgggggtgggtcg
aacatgagaaaacaaatggccacccctcacaccggggctagcctctccgccccaatcctg
tccaatcttctcaacacacccgaatcctcaccaccatcgagcccagacacttcaaaacca
cgaaactcatccagcccagacttgacagacgatcaaaccggacgatcgtctgcgaacagc
agccattatgaaagtgttttgagttctagtggacttttgacgcctgatcgttcaccaaat
gacgcgggggagagtgtgttcaaattcccaccacacagcgaggagagtcgactgagcggg
agtcatgggtcatcgtattcagaactgttgcggaaattcagcacaaacgggaatatgtac
ataagtcggttccggaacgactacaccccagtccccaccagcaccaatttgaactcgtcc
tcagagaaccttgtcaccctccgcaagctagtgagtcagccccacaccaccatgtctagc
tccttttaccgtcagaagtcgtctgcccgaatgcaaccaccttgtttgaagtctaacatg
gccacacccagtccctacccctcctgccaacagcaagtggctccttacccccagacaagc
acacacctcccggagggggacatactcgagaagttctctgaagttgagagacttggcgac
gtcgatagaagtgaatttgaccagtatttattcggctcgtcttcccaggccaacccaaac
acaaacactttctgccatgctggtgtgacttttaaatacagttcagtttcttacgatcaa
gtggcgagttctcccgaatatgaccccggttcaagtgatgtctcgcatgtcgtggaacat
ggcgatgacatgagcccggactatgaagtcgcatatcagtatgactttgacgggtcttgt
ctcatatcagcactgaccaactccccatctttctga
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integrated database retrieval system