Haliotis rufescens (red abalone): 124136356
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Entry
124136356 CDS
T07893
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03083
Polycomb repressive complex
hrf04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124136356
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
124136356
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrf01009
]
124136356
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrf03036
]
124136356
03029 Mitochondrial biogenesis [BR:
hrf03029
]
124136356
Protein phosphatases and associated proteins [BR:
hrf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124136356
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
124136356
HMT complexes
COMPASS/SET1 complex
124136356
MLL-HCF complex
124136356
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124136356
Mitochondrial biogenesis [BR:
hrf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124136356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
124136356
NCBI-ProteinID:
XP_046358226
LinkDB
All DBs
Position
Unknown
AA seq
1547 aa
AA seq
DB search
MAAPILKWKRVTNTTGPAPRPRHGHRAVAIKDLMIVFGGGNEGIVDELHVYNTTTNQWFV
PAVRGDIPPGCAAYGFVCDGTRILVFGGMVEYGKYSNELYELQASRWEWKRLKPKPPKNG
PPPCPRLGHSFTLLGNRAWLFGGLANDSEDPKNNIPRYLNDLYALELKPNSSQMGWDLPV
TVGQPPPPRESHSCASYATKDGRHSRLFIYGGMSGCRLGDLWQYDVDTVTWTKPVVQGIP
PLPRSLHTATVIGNRMFVFGGWVPLVMDDVKVATHEKEWKCTNTLASLHLGNNCVTDLMT
WEPLAMEVFEDALPRARAGQCSVAINTRLYIWSGRDGYRKAWNNQVCFKDLWFLETEKPP
APSRVQLVRASTNTLEVCWGSVPTADAYLLQLQKYDLPPSQAMTPTAVPVSSALVKPPTP
TAPAPVMRSPTAATGAVRPLGAANLASLALTAPQTIRVTATPRVKTPVTITPVSQGMRVA
TPQIISVGQGHKTIVTSQGATGQMTGIAALAAAAAATQKIPGTTGATTTPMSGIKVVTPT
IVTPTGVKVQGKLQGTTLSPGTQTIRVSAPGSAILKTAGGATNMAGKQIITVHKAGSMSG
SQPQIVTLVKTTQGMTVATTKGGLPQGATIVKLVTTQAGSNKPTAIFTSNQSGQTPSTIL
GISSVQPSSSSKNVTTIIKTIPSSMISMAKAGVAGVTTTHAGTKTIVIAAPRGSGGSLNT
PTKIITSVPKLGGQGNTQFIVVSPQGSQASSTAQTIIGNKPITVTALPSSSAGTSPATKP
VVTILSAAQAGMTGSTTAVPAHISTTTTAATSILSSPMVKASTGGTSTISLIAQQTPGDV
PTTLATRQIIATPTHTTLGKQPMQITITPVGPKVTPIVAPTITTVPVPVTTPVVVADAQA
GGDCGRPEGCGTPPPGDCGRPEGCGTPPPNGDCGRPEGCGTPPPGDCGRPEGCGTPPPGD
CGRPEGCGTPPPGDCGRPEGCGTPPPGDCGRPEGCGTPPPGDCGRPEGCGTPPPGDCGRP
EGCGTPPPGDCGRPEGCGTPPPGDCGRPEGCGTPPPGDCGRPEGCGTPPPGDCGRPEGCG
TPPPGDCGRPEGCGTPPPTQGDCGRPEGCGTPPPAGSDQGQGDSGPSEGQGDSGTSEGVT
APGEGQGDNGDSKPSVVGNPGEQSVRQEGSPAPTVATTSQPMLVAAQLNSATDSAGVGSV
EAPADEPMDTTPAAAATEHSGISVKPEPGLLAQAQSESAMDTSSTFTGSAASAVSSVADV
SDPLATLATAAMSSAPVSAAVVKQEPGTPANGVKTEPEIKQEKTTPLKRDANQWYDVGII
KGTTCIVSHYHLPSEGAQGNGDDIDVVNVPDHSVLKRQELQPGTAYKFRVAGINACGRGP
FSEVSAFKTCLPGFPGAPSAIKISKSAEGAHLSWEPPQNTAGKITEYSVYLAVRNAAAAE
QKPGAPAQLAFVRVYCGPNPSCVVTTASLASAHIDFTTKPAIIFRIAARNEKGYGPATQV
RWLQDASQTAMAGGKIAVKRVSSDGKPTITITGAAIKKIKTEEDGQS
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacccatattgaagtggaagcgggtaacgaacacaacagggccagctcctagg
ccgcggcatggccatcgtgcagttgcaatcaaggatctgatgatagtttttggtggtggt
aacgaaggaatcgttgacgaactccatgtttacaacacaactacaaatcagtggtttgtg
cctgctgtgagaggagatattcctcctggctgtgcagcttatggctttgtttgtgatggc
acacggatactggtctttggtggaatggttgaatatgggaaatactcaaacgaattgtat
gaacttcaagccagcagatgggaatggaaacgactcaaaccaaagccgcctaaaaatggg
ccgccgccgtgtcccagattgggtcacagcttcactttgcttggtaacagggcttggctt
tttggaggtcttgcaaatgacagtgaagatcctaaaaataatattccaagatacctgaat
gatctgtatgccttggagctgaaaccaaactctagccagatgggttgggatttaccagtg
actgtgggccagcctccgcccccgagagagagccactcgtgtgcatcatatgcaacaaaa
gatggccgccactccagactgttcatatatggaggaatgagcgggtgcagactcggtgac
ctgtggcagtatgatgtggacaccgtgacgtggacgaagcctgtcgtgcagggaatccca
cctctgccccggagtctccacacagccacggtcatcggaaacaggatgtttgtgtttggg
ggatgggtcccactggtcatggacgatgtcaaggttgctacacatgaaaaagaatggaag
tgcacaaacacactggcatccctacatttagggaataactgtgttacagatttgatgaca
tgggagcctctggctatggaggtgtttgaagatgccctcccccgtgcccgggcgggtcag
tgtagtgttgccatcaacacacgtctctacatctggagtgggcgagacggctaccggaaa
gcttggaataatcaggtctgcttcaaagacctgtggttcttagagacagaaaagccacca
gcaccgtctcgtgttcagcttgtacgtgccagcaccaacacgctggaggtctgttggggc
tctgtgcccaccgctgatgcgtacctgctgcagttacagaagtatgacctacccccgtca
caagccatgacccccaccgcagtgccggtcagcagtgccctggtcaagcccccgaccccc
acggcgccggcacctgtgatgaggtcccccactgcagccactggcgcagtgaggcctcta
ggagcggccaatctggcctcgctcgcactcaccgccccacagacaatcagagtgacggcc
accccgagggtcaagactcccgtcaccatcaccccagtgtctcaggggatgagagtagcc
acaccccagatcatcagtgtcgggcagggacataaaacaatagtaaccagtcagggagct
actgggcagatgactggcattgctgcccttgcagcagcagcagccgcaacacagaagata
cccggtaccactggcgccaccaccacgcccatgtcaggcatcaaagtggtcacgccaacc
atagtcacacccacaggggtcaaggtgcaaggcaaacttcaaggaacaacattatcacct
ggaacacaaaccatccgcgtgtctgccccaggatcggccatcttgaagacagctggcggg
gccaccaacatggcaggcaaacagatcatcactgtccacaaggctggatcaatgtcaggc
agccagccacagattgtcacactggtcaagacaacacaagggatgaccgttgccactaca
aagggaggcctgccacaaggtgcaaccatcgtgaagctggtgacaacccaggctggctcc
aacaaacccacggccatcttcactagcaaccagtcgggccagaccccctccacaatcctc
ggaattagcagtgtccagcctagttcttccagcaagaatgtgactacaataatcaagact
ataccttcctccatgatctcaatggccaaagccggagttgccggtgtcacgacaacccat
gcaggcaccaagaccatcgtcattgcagcacccaggggcagcggggggtcactcaacaca
cctaccaaaataatcacatcagtgcccaaactgggtggccagggaaatactcagttcatc
gtggtcagccctcaggggtcccaagcttcatccacagcacagaccatcattggcaataag
cccatcactgtcaccgctcttccttcatcgtccgcgggaacatcaccggccactaaacct
gttgtcaccatcctgtctgcagcccaagccggcatgaccggatccactacagctgtccct
gcccacatctcaactaccaccactgctgccacctccatcctctccagccccatggtgaag
gcatccacggggggcacctcaaccatctcactcatagcccagcaaacccccggagatgtc
cccacaacgctcgccaccaggcagatcatagccacacccacacataccacactaggtaaa
cagcccatgcagatcaccatcactccggtcggccccaaggtcacacctatagttgctccg
acgatcaccactgttcctgttccagtgactacgcctgttgttgtagcagatgcccaggct
gggggtgactgtggaagacctgagggctgtggaacaccgccacctggggattgtggaaga
cccgagggatgtggaacaccaccacctaatggagactgtggaagacctgagggatgtgga
acaccgcctcctggggattgtggaagacctgagggatgtggaacaccgcctcctggggat
tgtggaagacctgagggatgtggaacaccccctcctggggattgtggaagacctgagggg
tgtggaacaccccctcctggtgattgcggaagacctgaaggctgtggaacaccccctcct
ggggattgtggaagacctgagggatgtggaacaccccctcccggtgattgtggaagacct
gagggatgtggaacgccacctcccggtgattgtggaagacctgaaggctgtggaacgcca
cctcctggggattgtggaagacctgagggatgtggaacaccccctcccggggattgtgga
agacctgagggatgtggaacgccacctcctggtgattgtggaagacctgagggatgtgga
acgccacctcccggtgattgtggaagacctgagggatgtggaactccaccacctacgcaa
ggagactgtggaagacccgagggatgtggaacaccccctccggcaggtagtgatcaaggt
caaggtgatagtggaccgagtgaaggtcaaggtgatagtgggacatcagaaggggtcact
gccccaggtgaaggtcaaggtgataatggtgactctaaacctagtgttgtcggaaatcca
ggtgaacagtcagttcggcaggaaggctctccagcaccaacagttgcaacaactagtcag
ccgatgttggtcgctgctcagttaaatagtgctacagatagtgcaggtgtcggcagtgtg
gaagcacctgctgacgaacccatggacactacccctgctgcagctgctactgaacatagt
ggcatctcggtgaaacccgagccaggcctcctcgcccaggctcagtcagaaagtgctatg
gacacatcttcgacatttacagggtcagcagctagtgcggtgtcaagtgtggctgatgtg
tcggatcccctcgcgacattggcgacagcagccatgtcatcggcgcctgtttcagcagca
gtagtcaagcaggagcccgggacacctgcaaatggcgtcaagacagagccagagattaaa
caggaaaagacaactccgttgaagcgggacgcaaaccagtggtatgacgttggcatcatc
aaaggcacgacgtgtattgtatctcactaccacctaccttctgaaggagcccagggcaat
ggagatgatatcgacgttgttaacgtacccgaccacagtgtgttaaaacgacaagaactc
cagcctggaacagcctacaagttccgtgtggcaggtatcaacgcatgtggccgagggccg
ttcagtgaagtctcagcctttaaaacatgtctaccaggtttcccaggggcaccctcggca
ataaagatcagcaagagtgcagagggagcacatttatcatgggaaccacctcaaaacact
gccggaaaaatcaccgaatattctgtctatttggccgtccgaaatgctgcggcagcagaa
caaaagcctggcgccccagctcaacttgcgtttgtgcgagtttactgtggccccaatccc
tcatgtgtcgtcaccacggccagtttggcatcagctcacatagacttcaccaccaagcca
gccatcatcttccgtatcgcagctaggaacgaaaagggctacggcccagctactcaagtc
aggtggctgcaagatgcctcccaaacagcaatggcgggtggaaaaatagccgtgaagaga
gtcagctccgatggcaaacccaccatcacaatcactggtgcagctattaagaaaatcaaa
actgaggaggatggacaaagctaa
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