Haliotis rufescens (red abalone): 124136597
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Entry
124136597 CDS
T07893
Name
(RefSeq) uncharacterized protein LOC124136597 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrf03000
]
124136597
Transcription factors [BR:
hrf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124136597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
124136597
NCBI-ProteinID:
XP_046358520
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MGNAVSAAKRSVKSNKTFTVPWRGKSGDKMVRATSSGKTLTSDQILRTDLQLSSDDSETK
MDISDDSQTSVNLGAKDITEIVNLGDARGSKFCDEIIGQQILKKPNEQDVRYVYPPGKNQ
PIAPAPAPAPAAPKPDVRFVFLQPGQKLSDINLVPIHSSEQAAAQTTQPGHVVYLNKIPV
IAAHSPSFPSQDDNRSPRIPNNTPVKSSPTSGILPSPVTARHKSPDSVSVPSDRAKDVVP
GTGDRYRTPGSSFRNKNGNVKRPMNAFMVWARTYRAKLASRFNTDTNSQISMKLGDVWNS
LTREEKQPYYDQADLIKNQHKKEFPDWVYRPSPSKKRQEESATHNVLWARFGGGSSAATL
ARIATAAANHAPLESLQKDAPRGQPRVVGRQIGAEAQGTLGKMQENQHQGRQDTVNPPDA
GRTLDNPRTPDINAREVLKAKLSGQTRTSHGNKSPEKPSPHSASGTSPSPKRNSTNLPQH
KSPVKIAKNKTARTTVKKKKTSRANAPREDDKHLLDHRPKSPGAPPTSPRSTVSLDSPKK
AGEKKTSVTDQKRVNSPAERTGGETYRLGEEEQGDDSWPFPFPPYQYGPFDTLSPKDVPS
DEILGMRAGRARESDEDSSRPERVTSDLYLDVHRWRSFLTSSGSNSKLTDEDVYDIFNPS
HCDHGPDCRVCTSDVDLAPKSLRDTLRVGKDGVFGNPNVCLEVDFKVGPDYHKPEEDVSA
VDRISGAVCEALKALNEPDHVGNESPGCGAETSIVMTPTTSSSPTMIDRETPSDSKVASD
SETSDVTENGHNGISYVDIGLSTDLTTHVMFKPTSESSRDDGETPGRTDHLDKRHNRSAC
IACCLVENAQEQLKRGGRMKDASPTDDPDLASEMPRSVRSLRSAPGPRQRQVYKMDDSNT
RMARLAPDVTQLIPVRSSDSESQMRSDLYHRKIQLHSDISKYKIFDTNKNASEQVGSRRL
KSAQLARGEQTLKLRACDGEGVRGRGSLSLGNMSADCSLDVELDSVEGTVMRLGEREGGR
KATRNRGAAFPCDDDRKPRGKKTSKSKSLESGAAVGEADMCRGDSISRSTQPTSPTKPNM
EILKTLIVTEKDGLGCAATEDIDKSECTAADTERPGCPKTDASPGLNERTKWNRRQSFRN
RSQMTSRIYASRQTLSLLHRGRMINNLARPTRSKPR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacgcagttagtgctgccaaacgatccgttaagtccaataagacatttactgtc
ccatggcgaggaaagagcggggataaaatggtacgcgctacatccagcggaaagacactg
acgagcgaccagatcctaaggactgatttacaactatcatcggatgactcggaaacaaag
atggatatttccgatgattcacagacaagtgtaaatttgggtgccaaggatatcactgag
atcgttaacctgggggacgcccgaggatccaagttttgtgatgaaattattggacagcaa
atactgaaaaagccaaatgaacaggatgtacgttatgtgtaccccccggggaagaatcaa
ccgatagcaccggcaccggcaccggcaccggcggcaccaaaaccggatgtccgttttgtc
ttccttcagccaggacaaaaactctcggacattaacctggttcccatacacagcagtgag
caagctgccgcccaaacaactcagcctggccatgtcgtgtatctcaacaagattccagtt
attgcagcacactccccgagcttcccatcacaggatgacaacaggtcccctaggatcccc
aacaacacaccagtcaaaagcagtccaacatccgggatcctcccctcgcccgtcacagct
cgtcacaagtccccggattcagtatccgtcccatcggaccgggccaaggacgtggtacct
ggcacaggggatcggtatcgtacgcccggctccagcttccgtaacaagaacggcaacgtg
aagcgtccaatgaacgcattcatggtgtgggcgcgcacctaccgggctaagctggcatca
cgttttaacacagacaccaactcccagatcagcatgaaactgggcgacgtgtggaacagc
ctcactcgggaggagaagcaaccttactacgaccaggccgatttgataaagaaccagcac
aagaaggaattcccggattgggtgtatcgcccgtccccttccaagaaacgacaggaagaa
agtgccacccacaacgtcctttgggccagatttggcggggggtcatcggcagcgactctg
gcgcgcattgcaaccgccgcggccaaccacgcgccactggagagtctgcagaaggacgcg
cctagaggccagccccgggttgttggcagacagattggagcggaggcacaggggacgctc
gggaagatgcaggagaaccagcatcagggacggcaagacaccgtcaacccacccgacgcc
ggcaggacactggacaatccccgcaccccggacatcaacgcccgggaggtcctcaaggcc
aagctctctggtcagacaagaacgagccacggcaataaatctccggagaagccatcgcca
cacagtgcctcgggaacatcgccgtctcccaagaggaactcaacgaaccttccgcagcac
aagtccccagtgaagatcgccaagaacaagacggcgagaaccactgtgaagaagaagaag
acaagtcgcgccaacgcacctcgagaagacgacaaacacttgctggaccatcgaccaaag
tcgccaggagcaccacccacttcccctcggagtaccgtcagtttggactcgcctaaaaag
gcgggcgagaagaagacgtctgtgacggaccagaagcgagtcaattcaccagcagagagg
actggaggagaaacatacaggctcggggaagaagaacagggagatgactcgtggccattt
ccgttcccgccataccagtacggaccgttcgacaccctctccccgaaagacgtgccttcg
gatgagatacttggtatgagggcaggtcgggcccgtgagtcggatgaagattcgtctcgt
cctgagagagtgacgtcagacctgtacctggacgttcacaggtggaggtcttttctgacg
tcatccgggtccaactccaagctgacggacgaggatgtctatgatatcttcaatccctcc
cactgtgatcatggacccgattgccgtgtgtgcaccagtgacgttgaccttgctcctaaa
tcgcttcgcgacaccctgcgagtgggtaaagatggtgttttcggtaatcccaacgtgtgt
ctcgaggtggatttcaaggtcgggcccgattatcataaaccggaagaagatgtgtctgcc
gtggaccggatatccggcgccgtgtgcgaagcactgaaagccctgaacgaacctgatcat
gtaggcaacgagtcccctgggtgtggagcggaaacgtcaattgtgatgacgccaaccact
agcagctctccgaccatgatcgacagggaaacaccatcagattccaaggtggcgtctgac
tcggaaacctctgacgtcacagagaatggacataatggcatcagctatgttgacatcggt
ctttcgacagatctcaccacgcatgtgatgttcaaaccaacgtcagaatcttcgagggat
gacggagagaccccgggacgtacggatcacctggacaagcgtcacaataggagtgcgtgc
attgcttgctgcctcgtggaaaacgcgcaggaacaattgaaacgtggtggacggatgaaa
gatgcttctcccacggacgatcccgatttagcatcagagatgcctcgcagtgtcagaagc
ttaagaagcgcccccggtccccggcaacgtcaggtatacaagatggacgacagtaataca
cggatggctagactggcccctgacgtcactcaactcattcctgtgaggtccagcgatagt
gagagtcaaatgcgaagtgacctctaccacaggaaaatacagcttcattctgatatctcc
aagtataagatatttgacaccaacaagaatgcgagtgaacaggtcggctcgaggaggtta
aagtcagctcagctagcacggggtgaacagacgcttaaactccgggcatgtgatggcgag
ggtgtcaggggaagggggagcctaagtttggggaatatgagtgcagactgcagcctggat
gtggaactggatagcgtagagggaactgtgatgaggctgggggagcgggaaggcggcagg
aaagcaacacgaaacaggggggctgcttttccatgtgatgatgacagaaagccgcgaggg
aagaagacaagtaaatccaagagtctcgagtccggggcagccgttggtgaggccgacatg
tgtcggggggactcgatttccagatcgacacagccaacgtctccgactaagccgaacatg
gagatcctgaagaccttgatagtcactgagaaagacggccttgggtgtgctgcgacggag
gacatagacaagtcggaatgtacggctgcggatactgagagaccgggatgccccaagact
gatgcttctcccgggctgaatgagaggacgaagtggaacaggcgacagtctttccggaac
cggagtcagatgacctcgaggatctacgcatcccgccagacgctgtcactgttgcataga
ggcaggatgatcaacaacctcgccaggcctaccaggtccaagccgaggtga
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