Haliotis rufescens (red abalone): 124136676
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Entry
124136676 CDS
T07893
Name
(RefSeq) stabilin-2-like isoform X1
KO
K19013
stabilin-2
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124136676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrf00536
]
124136676
Glycosaminoglycan binding proteins [BR:
hrf00536
]
Hyaluronan
Cell surface receptors
124136676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
cEGF
EGF_Teneurin
EGF_MSP1_1
EGF_TEN
EGF
Motif
Other DBs
NCBI-GeneID:
124136676
NCBI-ProteinID:
XP_048252793
LinkDB
All DBs
Position
Unknown
AA seq
1777 aa
AA seq
DB search
MLHYSTIMGLLTNIGVTYVIIQAAVIFAVIPDGSSERFCNRTFTSNFTTQCTACVRNKDV
ECPYNATKLTTGKGLADCMYIVTLGGSKIVQLAGCHHLCYRTAISVKCCPGYWGPQCEEC
PGGADNVCSGHGLCSEGFDGIGTCDCDENFTGTVCELCANNTFYGQNCTEECQCGNGTCN
SGVFGDGSCDCFSGFTGDYCDINIFGCENMTCDNNSRCQEIEGNTTCVCDHGYEERDNKT
CSPIDNCVESPCHVYASCTPTGPAEHECSCNSGYSGDGVYCEPINPCQVDNGGCVVLKSV
CMYMGPNRSACDCMAGFENYVPGYGCSLIDICSSVSCHKNATCITVSPNAIECTCNEGFV
GDGQECYGNIMQRLEDLNENDPDLKNQLTFAMEMLNTGYRDALTLQGPFTIFVPASQGFK
SVFKASTFESFLANRDKVRQIIRQHMIIGQLSLDDLQNHTDYFTLQGVPLTLSLRARSEV
FKYRLRGQSDKSKILKGDLVCANGMIHITNSLITMEPEIVGDPEKTVLDMINQEGRYRRF
QSHVQRLGLESLFEAGNVTVFVPNNRVWDDLPEGTVEYLMSYDGFPTLRKIMENHIFPGT
THVADLINKRRIISLSNSAVSIGIRPTGLIQLNGNVNISQADITCRNGIYYHIESLLVPA
DMGDVLPKRCDVRTFRIVRGSCDVCYGDLKCPLPTDKPLKTVISGCRYWVNIEGQYVAYV
GCARMCNRTYTRKRCCPGFYGEDCQSCPGGFQRPCNGRGKCFDSRYGNGTCFCEKNFSGL
ACQNCAGIETFGPNCSQKCSCLHGDCDDGTQGTGTCRSNSCFEGFVGDNCDRRLTKCGPY
NQLCHAYSQCFQEGETFGCLCKPGYEGDGLSCHEIDPCAKADRGGCHLQATCTKVGPDMP
RCECDEGWVGDGFNCQQENPCMRQGDCGGNATCRTITVGQYHCICDDGYFGNGSVCSPTN
SCLSNNGGCHAKAFCFSVGAGLNNCSCMRDYGGDGYSCYSSISQEILDHPRLTVLASLLK
IIDSDDNFLKDRSENFTVFAPTNDALDNFTALSPEGYFKNPENVLTMLRFHTMENAYTTY
NLLQLSKAYPSFSTLYDGYSIRISAKNQTILIFNSQTSTSTVSTGNIPALNGYIHIVDKV
LEPFRPESDQPDLDEFFSQKSDYSLFYQYLSKFGLVSELEDMDQYTLLAPTNTALLQKEG
TVTTNFLKYYMIPKMILTPAVINGQREETLLGKDFPLQFTVKNQQVYVNGILIVKDDLLT
SGGVIQGITQLLHPQLSRCDDKDVNTTRGPCTSCRAANITCPQGYTPVEGAGLVKFQCTY
SVSGSAGQTYNYLGCQGMCQSVKVTPACCSGYFGSECAECPGGPETPCYGNGLCMDGVEG
SGECKCFPQFRGEDCGSCLEGLAGPGCNVSIKSCDYQNGNCSENAQCSRVGDKVTCRCND
GYIGDGRICYSPCDNQNGKCHEYASCQYDYKTINCTCYPGYHGDGHTCIHTINACARNNG
GCSPFAHCLYTPPAVTHITNGTVSCICLNGYVGNGTWCNRDAYDTLSYLPFTLRFFESLE
FVNSDPSAQNLTDLLKDRFQSITVFVPVDESIIDLEMLSLRDLNNHVVNNTRVYLNASVS
LPLTVESLDGQPLVITRNGSYYQVNGIKIVDANIQTLNGYIHLIQRPLWADEDNKPGVKT
DTTTTTKAGTGRIVGPVVGVLLILIIITIIIAVLVYRRTKVTGFMDVWRRLRKGSDSSLS
FARLQAHQGDSDSGTFQQADNINFHNPLYSSRASDDS
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgttgcattattctacaattatgggattgttaacaaatattggagttacgtatgttata
atacaggctgctgtgatatttgctgttattcctgatggctcgtcagaacgattctgcaac
cgaacttttacatctaattttaccacgcagtgcacggcttgtgtccgcaataaggacgtg
gagtgtccgtacaatgccactaagctgaccactgggaaggggttggccgactgcatgtac
atcgtgacactcggtgggtccaagattgtacagctggcgggctgtcaccacctgtgttat
cgcacggcgatctctgtcaagtgctgcccagggtactggggcccacagtgtgaagagtgt
cctggcggcgccgacaacgtgtgcagtggtcacggcctgtgcagtgagggcttcgatggg
attggcacttgtgactgtgatgagaatttcactggtacagtgtgtgagctgtgtgccaac
aatacgttctatggccaaaactgtactgaagagtgccagtgtgggaatggtacatgtaac
agtggagtgtttggagatggatcatgtgactgctttagcggcttcaccggagactactgt
gatatcaatattttcggttgtgagaacatgacgtgtgacaataacagccgatgtcaggag
attgagggcaacaccacctgtgtttgtgaccatggttatgaggaaagagacaataagaca
tgttctcccattgacaactgtgtggagtccccctgccacgtgtacgcctcgtgtacccct
actggcccggctgaacatgagtgtagctgtaactcagggtattcaggcgacggtgtctac
tgcgagcccatcaacccctgccaggtggacaatgggggatgcgtggtcctcaagtcagtc
tgcatgtacatgggaccaaacaggagtgcctgtgactgtatggcagggtttgagaattat
gtcccaggctatgggtgttctctgattgatatttgctcctctgtgagttgccacaagaac
gccacctgtatcacagtcagccccaatgctattgagtgtacctgtaacgagggtttcgtg
ggagatggccaggagtgctacgggaacattatgcagcgccttgaggatctgaatgaaaat
gaccctgacttgaagaaccagttgacgtttgcgatggagatgctgaacaccggctacagg
gacgccctcacactacagggtcccttcaccatcttcgtccccgcaagccagggcttcaag
agcgtcttcaaagcttctacttttgagtccttcctggctaacagggacaaggttcggcag
ataatccgccaacacatgatcattggtcagctgtctctggacgacctgcagaaccacacg
gactatttcaccctacagggcgtccccctcacactgagtctcagagcgagaagtgaggtg
ttcaagtaccgactccgaggccagtccgacaagtcgaagatcctgaagggagatctggtg
tgtgctaatggcatgatccacatcaccaactctctcatcaccatggagccagagatcgtg
ggagatcctgagaaaactgtgctggatatgataaaccaggaggggaggtaccgcagattc
cagtcccatgttcagaggctgggactggagagtctgtttgaggcaggcaacgtgacagtg
tttgtccccaacaaccgggtgtgggacgatctgccggaaggcaccgtggaatacctcatg
tcttatgacggattccctactctaaggaaaatcatggaaaaccatatattccccggaacg
acgcatgtcgctgatttgatcaataaaaggcgaatcatctccctgtctaactctgctgtc
agtataggcatcagacccaccggcctgatacagttgaacggcaatgtgaacatctcgcag
gctgacattacctgcaggaacggcatctactaccacatcgagagtctcctagtgcctgct
gacatgggggacgtgctgcccaaacgctgcgatgtcaggaccttccgaattgttcggggt
tcctgcgatgtgtgttatggtgaccttaaatgtccactaccaacagataaaccactgaaa
actgttataagtggatgtcgctactgggtgaatatcgagggacagtatgtggcatatgtt
ggatgtgctcgcatgtgcaacaggacatacacgaggaaacgatgttgcccaggtttctat
ggtgaagactgtcagtcgtgtccagggggcttccagaggccatgcaatgggaggggcaag
tgttttgacagtcggtatggcaatggtacatgtttctgtgagaaaaacttcagtggacta
gcctgtcagaactgtgctggcatcgagaccttcggccccaactgttcacaaaagtgcagc
tgcctccatggtgactgcgacgacggaactcagggaacaggaacctgcaggagcaactcc
tgttttgaggggtttgtgggggacaactgcgaccgccgcctaacaaagtgtggcccctac
aaccagctgtgtcatgcttactcccagtgtttccaagagggagaaaccttcgggtgtctg
tgcaagccagggtacgaaggagatggattgagttgccatgagatagatccttgcgccaag
gcagatcgaggagggtgccacttgcaggcaacatgtacaaaggtcggcccggacatgccc
aggtgtgagtgtgatgaggggtgggtgggtgacggcttcaactgccaacaagaaaaccca
tgcatgcgccagggcgactgtgggggaaacgccacctgcaggaccatcactgtcggccag
taccactgcatatgtgatgatggctatttcggcaatgggtctgtctgttctcccacaaac
agctgtttgtccaacaatggagggtgccatgctaaggcattttgtttctcagtgggggct
gggctcaacaactgctcgtgcatgcgtgactacggcggcgatggctactcttgttactca
agcatctcccaggaaatcctggaccatccacgactcacagtcctggccagtctcttgaag
attattgactctgacgacaatttccttaaagatcgaagtgagaacttcacagtgtttgca
ccaaccaatgatgccttggacaatttcactgcactctccccagagggctatttcaagaac
ccagaaaacgtcctgaccatgttaaggttccacactatggagaatgcctacaccacctac
aacctgctgcagctgtccaaggcctaccccagcttcagcaccctgtatgatggctactcc
atcaggatctcagctaagaaccagacaatccttatattcaactcacaaacatccacatca
actgtatccacgggcaacatccctgcactgaatggctacatccatatagttgacaaggtg
ctcgaacccttccgcccggaatcggaccagccagacctggatgagttcttctcccagaag
tcagactactcactgttttaccagtacctcagtaaatttggccttgtgtctgagctggag
gacatggatcagtacactctcctggcgcccaccaacacagctctgctgcagaaggagggc
acagtgacgactaatttcctcaaatactacatgatccccaagatgattctcacaccagct
gtcattaatgggcaaagggaggaaacacttcttggcaaggacttcccgctgcaatttact
gtcaagaatcaacaggtgtatgtgaatgggatcctgattgtgaaggatgacctgctgacc
agcgggggcgtgatacagggcatcacccagctgctacacccccaactgagtcgctgcgat
gacaaggatgtgaacaccacacggggtccctgtacatcctgtagggcagcaaacatcacc
tgtccccaaggctacaccccggtggagggggcggggcttgtcaagttccagtgcacgtac
agtgtgagtgggtctgctggtcagacctacaactacctcggctgccagggcatgtgtcag
tcagtgaaggtgacacctgcttgctgctcaggatactttggaagcgaatgtgcagaatgc
cctggtggaccggagaccccgtgttacggcaacggcctgtgtatggacggtgtggagggg
tcaggggagtgcaagtgcttcccccaattccgtggggaggactgtgggtcatgtctggag
ggactggctggaccaggctgtaatgtctcaattaaaagctgtgactaccagaacgggaac
tgcagcgagaatgctcagtgctccagggtcggagacaaggtcacgtgtcggtgtaacgat
gggtacattggagatggacgcatatgttattccccgtgtgacaaccagaacgggaagtgt
catgaatacgcttcttgtcaatatgattacaaaaccatcaactgtacatgctatcctggt
taccatggtgacggacatacatgtatccatacaatcaacgcatgtgcgagaaacaatgga
gggtgctctccctttgcccactgcctctacactccaccagcagtgacacacataacaaac
ggaaccgtatcgtgtatatgtctgaatggctacgttggtaacgggacgtggtgcaacaga
gatgcctacgatacactgtcgtatctcccctttactctgcgcttctttgagagtctggaa
tttgtcaactcagatccgtctgcccagaatttgacagatttactgaaagatcggttccag
tctatcacagtgtttgttccagtcgatgaatctatcattgatcttgagatgctgagcctt
cgggacctgaataaccatgttgtcaacaacacacgtgtatatctgaacgcatcagtgtcc
ctccctctaactgttgagtcgttagatggtcagcccctggtcatcacacggaatgggtcg
tattatcaagtgaatggtatcaagatcgtagacgcaaacatccagactctgaatggctac
atccacctcatacagcgccccctatgggctgacgaagacaataaacctggggtgaaaacc
gacacaaccaccacaacaaaggcagggaccggccggatcgtcggaccagtcgttggtgtt
ctcctcatcctcatcatcatcacgatcatcatcgccgtgctggtgtatcggaggacgaag
gtcaccgggttcatggatgtctggaggagattgagaaagggatcagacagcagtttatcg
tttgctcgcctccaggctcaccagggcgacagtgactcaggaaccttccaacaggccgac
aacatcaacttccacaaccccctctacagcagccgcgccagcgatgacagctga
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integrated database retrieval system