Haliotis rufescens (red abalone): 124136952
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Entry
124136952 CDS
T07893
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03013
Nucleocytoplasmic transport
hrf03015
mRNA surveillance pathway
hrf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124136952
09122 Translation
03013 Nucleocytoplasmic transport
124136952
03015 mRNA surveillance pathway
124136952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124136952
03041 Spliceosome [BR:
hrf03041
]
124136952
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124136952
Spliceosome [BR:
hrf03041
]
Complex C
Other components
EJC/TREX
124136952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
124136952
NCBI-ProteinID:
XP_046362862
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MADEEAVLVDGKPVDELKVIDLKRECDKRGLSKLGSKTALADRLKAQLLLEKLQTQAKVS
PRSDDEAHVPNQALQNDEIAGQNDFIKQYLARQQKSLQMQMEVKKKIEEEKKHREESTTA
DESSADETHLAGKPEVISPDVTSKEVKAVGNAPAASETAMGRKRSLSKSSDKNEKALKVQ
KDADSNGKNADMKKARKSRSRSRSGSEERSRSRSRSLSSSPPRKRGGRRRQTKKADSPPS
KSLTRSSLRRAHKKSPTPSPSASSASDESSPEETPVKSSRGKGRGRGRGKGRTSRRGRPR
TISGSRSPSPSPSKEKVEVIAEKETPPEPETKRPRRGSSRKAAVAAAVAVAAITVEEPTR
EEPQLPIEKLDKPAHKTKEDPREKTPDKKTAKDKTDAEIVKTAKDQKDAEIVESKGEKKS
DPVEEKRPMSRKDYIKRSIAEPASEPVKVSVTAELKPEPKPEPKAVPQEQKKTEDKPPAP
STPNKTPNKTSVDVKDSSADDKSRDREEEKSKEDPAEKEVPQKRGRRWGRRSSQESSKPE
VIESPKAPEPKSHTEKDKQPEKEASSKSSVGHSSKQGEPETKAQEKPSDDNEKTGRKSRW
GRQKDSLPKPDVTETPKSEQSQLKAGSDERTDLRSKDASSKSEKDSISKLEEKSGSKLEK
EPSSKSEKGPSSILEKEHSSKLGKDPGSKSEKELCSKSEKETSSKSEKETSSKSEKELSS
KSEKDPTSKSEKETSSKSGKETSSKSEKDPTSKSEKETSSKSEKELSSKSGKEPSSKSEK
DPSSKSEKELSSKSEKEPSSKSGKEPSSKSEKDPSSKSEKELSSKSEKEPSSKSGKEPSS
KSEKDPSSKSEKELSSKSEKETSSKSGKETSSKSEKELSSKSEKEPTSKSEKEPISKSEK
NSKSQQESRPNVEKESSSKPEKEPSSKPEKEPCSKPEKETSSKSEEPSPKSEKEISSISE
TEHISKSGKNSGSKLKEHPSSKLEKEHSSKLEQEHMSKQEAESQVQEKLSKDSDKPERRN
RWGRKSSKDTDSVEAEATSKPGTTADSKTDEHAKGDKGLEKSSRTTESGIKVSEKEKAVE
EVEKTSKRNRWGAQNPAGDTPSKPKSSESDAPSESQKSEVKKTVSGAEPPKSDSGQKEST
VKPPTPEAKDLPESKSAKSEEMSLSRRFGSRKPSDDSKSQESKTSEQEDMEKPATKTRRW
GSRSSKDSSSRSEETVAEADSSKTEEKEQEAEKIIPKAVEQTIQDKPADSTSPKRADSPT
RRGRRWGARKTDAPKDAAESKKEKVEEPEATRSEKPDSTEDLDRSQPNVVPETEEEKEAE
AREDKQTSVKKAPLTVQSRISRRQSSSSEESSSEDEEQKERDGESSSAKSSSESSSESEE
SDDKNDDEDERSKAMDAEETEDSESKREADKAEAARKAAAVAEVVVPPRRRNLLSSSNKG
NEDKSEEKENMAGDRPIKKRKWGSSSAKYAKKSTSVEISTDSLKGLIDDVKPLNEPVLEL
EAEGEYGSEPEEDKRDIKIRRTVVQVVKDEEGKGEDTRHTLLETDNNKTEEEKEKVKSEP
KIVRRVNQASLQEPDEPQAARRSPSPARNPVCNIIHIRNLVRPFTLGQLKELLKRTGCIL
DGNGFWIDKIKSHCYVTYENDDEAVATRKALHGTRWPGSNPKVLRVEYASQDEIEFHRAQ
EESQILSAKPKKAEKEKKEKEKKEGTREVRRKEEPKPIREWDRDKVRDRSPPERERRKST
RSRSRDRERRRKEEERIRERKKGPEKKVEEEAPAKLLDDLFRKTKATPCIYWLPLTEEQI
ELRQREKKQRLDDRLKRRKEEDEQGHRAGRDADFKRKEPVEVGGRDRDMNRDRDRNRDRE
RERMRQRERQPPPRRSDSRSRSRPVRGRSRSDSVGRNRRRR
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagaggcagtcctggtggacgggaagccagtcgacgaactaaaagtaatc
gatctgaagagagaatgcgacaaaagaggactatcaaagttaggaagcaaaactgcattg
gctgacagattaaaagctcaactcctactagaaaagttgcagactcaagcaaaggtttct
cccaggagcgatgatgaggcacatgttccaaatcaagctcttcaaaatgatgaaattgct
ggccagaacgacttcatcaaacaatacttagcccgtcaacaaaagtcactgcagatgcaa
atggaagtgaagaagaaaatagaggaagaaaagaaacaccgtgaagaaagtacaacagct
gacgaatcttcagcagacgaaacccatttggcaggtaaaccggaagtaatctctccggat
gtgacgtcgaaagaggtcaaggccgttgggaacgcacctgccgcgtctgagacagccatg
ggcagaaagcggagtttatcaaaatcttcagacaaaaatgaaaaggcacttaaggtacag
aaagatgcagattccaatggaaagaatgctgacatgaaaaaggcgagaaaatctcgatcg
aggtccaggtcaggatctgaagaaagatcaagatcgcgatccagatcgttatcttctagt
cctcctagaaaacgtggaggtcgtagacgtcaaacaaagaaggcagactcacctccttcc
aagtccctaaccagatcgtccctacgccgtgctcacaagaaatctcccaccccatcgcca
tcagcatcatcagcttcagatgagtcctcaccagaagaaactccagtcaaaagcagcaga
ggcaaaggtcggggaaggggaagaggtaaaggtcgtacaagcaggagaggaaggccaagg
acaatctcaggctccaggtctccatctccttcaccttcaaaggagaaagttgaagtgata
gctgaaaaagaaacaccccctgagccagaaactaaaagacctcgtagaggaagtagtcgc
aaggccgcagtggcagcggctgtagctgttgcagcaataacagttgaggaaccaaccaga
gaagagccccaacttcccattgagaagcttgacaaaccagctcacaaaacaaaagaagat
cctcgggaaaagaccccagacaagaaaactgcaaaagacaaaacagatgctgaaattgtg
aaaactgcgaaagaccaaaaagatgcagagattgtggagtccaaaggagagaaaaaatct
gatccggtggaagaaaagagacctatgtcccgaaaggactatatcaaacgctccattgct
gaacctgcctcagagccagtgaaagtgagtgttactgccgagttgaaacctgagcctaag
cctgagcctaaggctgtgccccaggaacagaagaagaccgaagataagcctccagcaccc
tcgacgccaaacaagacgccaaacaagacatctgtagatgtaaaagacagttcagcagat
gataaaagtagggatcgtgaggaggagaaatcgaaagaggatcctgctgagaaagaagta
ccacaaaagcggggcagaagatgggggcgcaggtcttcccaagaatcttcaaagccagaa
gtgattgaatcccctaaagcaccagagccaaaatctcatacagaaaaagataagcagcct
gaaaaagaagccagctctaaatccagtgtcgggcatagctcaaagcaaggtgaaccggaa
actaaggcccaagaaaaaccaagtgatgataatgaaaaaacaggaaggaaaagtcgatgg
gggcgacagaaagattctctgccaaagcctgatgtgacagagactccaaaatctgaacag
tcacaactcaaagcaggaagtgatgaaaggactgacttgagaagcaaggatgcaagttcc
aagtctgagaaagattccatttctaaattggaggaaaagtctggttctaagttggagaaa
gagcctagctccaaatcagagaaaggacctagttccatattggagaaagagcacagttct
aaattaggtaaagatcccgggtctaaatcagaaaaagaactctgttctaaatcagagaaa
gagaccagttctaaatcagagaaagagaccagttctaaatcagagaaagaactaagttct
aaatcagagaaagatcctacttctaaatcagagaaagagacgagttctaaatcggggaaa
gagacgagttctaaatcagagaaagatcccacttctaaatcggagaaggagacgagttct
aaatcagagaaagaactcagttctaaatcagggaaagagcctagttctaaatcggagaaa
gatccctcttctaaatcggagaaagaactcagttctaaatcagagaaagagcctagttct
aaatcaggaaaagagcctagttctaaatcggagaaagatccctcttctaaatcggagaaa
gaactcagttctaaatcagagaaagagcctagttctaaatcagggaaagagcctagttct
aaatcggagaaagatccctcttctaaatcggagaaagaactcagttctaaatcagagaaa
gagaccagttctaaatcagggaaagagaccagttctaaatcggagaaagaactcagttct
aaatcagagaaagagcccacttctaaatcagagaaagagcctatttctaaatcagagaaa
aattccaaatctcagcaggaatctagacccaatgttgagaaagagtccagttcaaaacct
gaaaaagagccaagctccaaacctgaaaaagagccttgttctaaacccgagaaagaaact
agttctaaatcggaggagcctagtcctaaatcagagaaagagattagttctatatcagaa
acagagcatatttctaaatcagggaaaaattcaggttctaaattgaaagaacaccctagc
tccaaactggagaaagaacatagttctaagcttgagcaagagcatatgtctaagcaagag
gcagaatctcaagttcaggaaaagctgagcaaagacagtgacaagccagaaaggagaaac
cgctggggacgtaaatcttccaaagacacagattctgtggaagctgaggctacctcaaaa
ccagggaccactgcagatagtaagacagatgaacatgcaaaaggtgacaaaggccttgag
aaatcttcaagaaccactgagtctggtattaaggtatctgagaaagaaaaggccgtggaa
gaagttgagaaaacttcaaagagaaatcgttggggggcacaaaatccggccggtgacact
ccttcaaaaccaaaatcatcagaaagtgatgcaccatctgaatctcaaaaatcagaagta
aagaagactgtttctggtgcagaacctccaaaatcagattcagggcagaaagagagtact
gttaaaccgccaaccccagaagcaaaggacttgccagaaagcaagagtgcgaagagtgag
gaaatgtcgttaagtagacgttttggctccagaaaaccatcagatgattccaaatctcag
gagagtaaaaccagcgaacaagaggacatggaaaaacccgcaactaaaactagacgatgg
ggatcaagatcttccaaagattccagttcaaggtcggaagaaaccgttgctgaagccgat
tcatcaaaaactgaagagaaagaacaagaagcagaaaagattatacctaaagctgtggaa
cagacaattcaggacaaaccagcagattcaacttcaccgaagagagccgactccccaacc
aggaggggtcggagatggggtgccaggaaaaccgatgcaccaaaagatgcagccgagtcc
aagaaggaaaaggtggaagaacctgaagccacaagatcagagaagccagattcaacagaa
gatttggacaggagccaaccgaatgttgttcctgagactgaagaagagaaagaagctgaa
gcaagggaagacaagcagacgtctgtgaagaaggctccattgactgtacagagtaggatc
agcagacggcagtcctcatcatcggaggaatcatcgtctgaggatgaagagcagaaggag
agagatggggaatccagttcagcgaagtcctcgtcggagtcgtcatccgagagtgaggag
tcggatgataagaatgatgatgaggatgaacgtagtaaagccatggatgctgaggagacg
gaagattccgagagtaaacgtgaggctgacaaggcagaggcggcgaggaaggcagcagcc
gtggcagaagtggtggtgccccctcgacgaagaaatctactctccagttccaataaaggc
aatgaggacaagtcggaggagaaggagaacatggcaggggaccgcccgatcaagaagagg
aagtggggatcatcaagtgcaaagtacgccaagaagtcaaccagtgttgagatttcaaca
gattcactcaagggtctgattgatgatgtgaagccgctgaatgagccagtgttggagctg
gaggccgagggggagtacgggtctgagccggaggaggacaagcgggacatcaagatcagg
aggactgtcgtacaggtggtgaaggatgaggaaggcaaaggggaggacacgcgccacact
ttgctggaaacagacaacaacaagacagaggaggagaaggagaaggttaaatctgagccg
aagattgtccgccgcgtgaaccaagcctctctccaggaacctgatgaaccccaagccgcc
cgccgctccccatccccagcaaggaacccagtctgcaacatcatccacatccgcaacctc
gtgcgccccttcacactcgggcaactcaaagaacttctcaagaggacgggctgcatcctg
gatgggaatggtttctggatcgacaagatcaagtcccattgttacgtaacgtatgagaat
gatgatgaggctgtcgccacccgcaaggcgctccacggaacacgatggccaggctccaac
cccaaggtgctccgagttgagtacgcctctcaggacgagattgagtttcaccgagcccag
gaggagagccagatcctgtctgccaagcccaaaaaggctgaaaaggagaagaaagagaag
gagaagaaagaaggaacgagagaagtgaggcggaaggaagagcccaagcctatccgtgag
tgggaccgggacaaggtgagggacaggtcaccacccgaacgtgagcggaggaagtcaacc
aggtctcgatctagggacagagagaggagaaggaaggaagaagaacggatccgggagagg
aagaagggtccagagaagaaagttgaggaagaagcacctgccaaattgttggatgacctg
ttccgcaaaaccaaagccacaccttgtatatactggctgccccttacagaagaacagatt
gaacttcgacaacgtgagaagaaacagcgactagatgacagactgaaacgccgcaaggag
gaagatgaacaggggcacagagctggccgtgacgcggacttcaagcggaaggaacctgtc
gaggttggtggaagagatcgagatatgaaccgggatcgagacagaaatagagaccgggaa
cgggaacgtatgaggcagcgagagcgccaaccacccccaaggcgaagtgatagccgcagc
cggtcccggccagtcaggggcaggagtaggagcgacagtgtcggcaggaatagaaggcgg
cgatga
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integrated database retrieval system
