Haliotis rufescens (red abalone): 124137112
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Entry
124137112 CDS
T07893
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03013
Nucleocytoplasmic transport
hrf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124137112
03015 mRNA surveillance pathway
124137112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124137112
03041 Spliceosome [BR:
hrf03041
]
124137112
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124137112
Spliceosome [BR:
hrf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124137112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
124137112
NCBI-ProteinID:
XP_046359237
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MSDAGFFKGTSAEQDNRFADKKKKLMKSMKFAESLEKKVDMTKVNVDTLKPWIAKRITEL
LGLEDDVIVEFVYNQLEERMPDPREMQINLTGFLNPKNARIFMSELWDLLCSAQENVGGI
PTAFLEQKKEEIKRRQAEQERIQTSLKKHEEQIKEALAKEREKSEKKDRDSRRTRSKSRT
PSDRKRKSRSPEKKRRSRSPSDRKHKSRSETPRKESPSSKRSPSPKKEDPDSSKTDVKTE
NGTTVKKDEEKKDDNKENQPEKAASPSTKTDKKSRDKSRSKSRSPDRKKRHRSRTPERKR
KRSRSRSRSPRRRRSPRRYSPRRSPRRSPRRSPRRRRSRSRSRSRHRPSSPRRRDRSPRH
RRSKSPVTKRQAPRRRRSPSDSSDSDSSGSSDSRTRSKQKSKAGKGSDDDGNDSGGKVGV
QQRRHYRKHDTEENSDSDSSSSSSEDERDKGRQKRNVRRSNSPRARRRSPPFRRSPSPRR
FGGRNRMSPVLRRRPPPPHFRRPSPPRYRSPPRRSPPRHRISPRGRAGGYDSRFKSRSRS
RSPPPMRRRRSSSSPVLRRGRPSPSPPPQMRRGSPRRRPISRSPSPARQRAMQRRRPPSS
SSSDSDSSPHPVKRQSSPPARRRKPSPAPKKRAPSSSSSGSSSPAPRHRDESTDPSPKRK
IKAPVSKSPVQRRNTRESPVRRRQISQSSPSPPPPPPRRRQNSTSSPRRRQRDTSDSPPP
RRQIMVSQKRTRRDSNSSASPSPQRVAKESRKQPAKVRGDKVLDDRPPRRKSGSPEPRAR
KAKRPPSFSPEPPVPGQTPPRVDSDEEAPAGEDTFRRVITIKKDKPEAGDAPRRREPSSS
PARANGETPKKKAKMEKAAASQSGSESSEGDQAAKKKKKKKDKKHKKHKKHKKHKHKKEA
KDAAEGSESGEGESLEELEKKLREKALMSMKMKVGAVMEGKDV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgcagggtttttcaagggcaccagtgccgagcaggacaaccgttttgcagac
aaaaagaaaaaattgatgaaatccatgaaatttgcagaatctttggagaaaaaggtggac
atgacgaaggtgaatgtggacacactgaagccatggatagctaaacgaatcaccgagctt
ctaggcctagaagatgacgttatcgttgaatttgtatataatcagttagaagaaaggatg
ccggaccctagggagatgcagattaacctcactggcttcctcaaccccaagaacgctcgc
atcttcatgtcagaactttgggaccttctctgtagcgcacaagagaatgttggtggcatt
cccactgcattccttgaacaaaagaaagaagaaatcaagagaagacaggctgagcaggag
cgaatccagacaagtctgaagaagcatgaggagcagatcaaggaggccctggccaaggag
agagagaagagtgaaaagaaggacagagacagcagacgaacacgatccaagtccagaacg
cccagtgacaggaaacgtaaatctagatcacctgaaaagaagcggaggtcacggtcacct
tcagacaggaaacataaatcaaggtcagagacaccaagaaaagaatctccctcctcaaaa
cgatctccatcaccaaagaaagaggatcctgacagcagtaaaactgatgtcaaaactgaa
aatggaaccactgtaaagaaagatgaagagaagaaggatgacaacaaagaaaatcaacct
gaaaaggcagcatcacctagcactaagacggacaaaaagagtcgtgacaaatctcggtca
aaatctcgcagccctgatagaaagaagagacatcgcagtagaacaccagaaaggaaaagg
aagaggagtagatccagatcgcgttctcctcgtagaaggcgctcacctaggcgctattca
cctcgacgatctccccgacgttccccccggcgctcccctcgtcgaaggcgatccagatct
aggtcccgatctcgacatagacccagttctccccggagaagggatcgctctcctcgtcat
cggaggtccaagagtcccgtcaccaagaggcaggccccaaggagaaggcgcagcccctct
gacagctcagactctgacagctcaggaagctcagattcacgcaccaggtccaagcagaag
tctaaggcaggaaagggcagtgacgacgatggcaatgattctggtgggaaggtgggcgta
caacagcgccgccactaccgcaaacatgacacagaagagaactctgactccgactcttca
tcttcatcatcagaggatgaaagagataaagggagacagaagcggaatgtgagaagatcc
aactccccaagagctcggcggcgttcccctcccttcagacgatcaccatcaccacggaga
tttggaggcagaaacaggatgtcgcctgtattgagacgaagacctccacctcctcacttc
agaagaccatcgcctcccagataccgctcaccaccaaggagaagcccacccagacacagg
atcagtcccaggggcagagcaggagggtatgacagtaggtttaagtcacgttcaaggtct
cgatcaccccctccaatgagacgaagacgtagctcatcttcccccgtcctacgtcgaggc
cgacctagcccatcaccccctccacagatgaggagaggatctccaagacgacgccctata
tcccggtctccctcacctgccagacagagagctatgcaaagaagaagaccaccatcatca
tcgtcatcagactctgattcgtcacctcatcctgtgaagagacagtcatcacctccagca
cgcaggcgcaaaccctcacccgcaccgaaaaagagggcaccatcttcttcatcatctggt
tcctcatcaccagcacctagacatagagatgaatcgaccgacccgtcacccaagagaaag
attaaagcccctgtttctaaatctcctgttcagagacgcaatacgagggaatcaccggtg
agaagacgacagatatcacagtcatcaccatcacctccaccacctccacccagacgccga
caaaattcaacatcatctccgcggagaagacagagggacacctcagacagtccaccacca
cgaagacagattatggtatcacagaagaggacaaggcgtgacagcaactcctcagcatca
ccttcaccacagagagtagccaaagagagtcgtaaacagccagccaaggtacgaggagac
aaagtgttggatgatcggcctccgaggagaaagtctggtagcccagagccaagagcaagg
aaggcaaagagacctccgtcattttccccagaacccccagttccaggacagacacccccc
cgggttgactcggatgaggaggccccagcaggtgaggacacattcaggagggtgatcact
atcaagaaggacaagcctgaggctggtgatgctcctcggaggagggaacctagttcaagt
ccagctcgggccaatggggaaacgcccaagaagaaggctaagatggagaaagcagcagca
tcacagagtggttcagagagctcggagggtgaccaggcagccaagaagaagaaaaagaag
aaggacaagaagcacaagaaacacaagaaacataagaaacacaagcataagaaggaggcc
aaagatgctgccgagggttcagaaagcggtgagggagagtcgctggaggagctagagaag
aagttgcgagagaaggctctcatgtccatgaagatgaaagttggcgctgtgatggagggg
aaggatgtctaa
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