KEGG   Haliotis rufescens (red abalone): 124137741
Entry
124137741         CDS       T07893                                 
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
  KO
K15542  polyadenylation factor subunit 2
Organism
hrf  Haliotis rufescens (red abalone)
Pathway
hrf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124137741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrf03019]
    124137741
Messenger RNA biogenesis [BR:hrf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     124137741
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT122_1st eIF2A Beta-prop_ELP1_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR41 WD40_RFWD3 Tricorn_2nd Beta-prop_HPS5 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 124137741
NCBI-ProteinID: XP_048258673
LinkDB
Position
Unknown
AA seq 1073 aa
MDGGMMMMRMPAPGPPMFRPRNFVPRMDQPNPQMSQVKSTDQKGQATGLSLPQIRQQFLN
QQSAMFDGKRMRKAVHRKTVDYNSSVIRYLHNRVWQRDRRDAVSIQPDALYQIDLEPPMA
TVENPINSVTTKFVRTSTNKFRCPIFCVTWTPEGRRLVTGASSGEFTLWNGLAFNFETIL
QAHDTSVRAMRWSHNDMWMVTADHAGFIKYWQSNMNNVKMYQGHKEAVRGISFCPSDNKF
TTCADDGTVRVWDFMRGHEERILRGHGADVKSVDWHPQKALIASGSKDNQQPIKLWDPRS
GQSLATIHAHKNTVMDLKWNRNGNWLLSASRDHLLKLFDIRNMKEEIHTFKGHKKEATAI
DWHPIHEGLFASGGSDGALMFWMVGCDREVGSMEEAHEGMVWSLAWHPLGHILASGSNDH
STKFWTRNRPGDTMRDKYNLNNLPTGTEQELLEYDLEPQLMPSLPGMGLEHGLPPHLRPK
ENVEEELPSIPGLDWSADEPFLRQYERDCAPKKKVPYARPIPKSFENAWKGNKQSGVLVP
EEQEGLPEKPSSRNDPRRRDRKERHGRNRSPDRGSNRHGRDQGGRDHDRDQGQDQGQRSH
QFQGQMQKGPQGQMLQGHHNQMQGQNTMGQPQNFQGGPNQQMQPNQFQGASPGFMPNQMQ
GQGQFRQGPGFHQMQGMMGMQGPPGMMQGQGGPGPGQGQFMGQQQMGGMQQQFGGQTMQQ
GIRMPQQQQQQQKQQQQQRQQQQQQQQRPDSQQQMRDGQRGGPGQQFGGQQNNGNGDMDL
RGQWSGGRGQGQRGGADEDFRQRSNQQQQQQQFGQDRREGFGGDQRRFASGGGGSGAGGG
GGGAGAGAGVWAGPGSGGGGGGGGKNWEGDMDLRQQRQEEGRGQFQGRQQNVDVDDRYGR
RGGGDVDERHQGGRQGGRGGGRIGGGMYDSQQGGRGGGDRSGQDRGGQDRGGQGFYDRQD
QDSPMSQGRKRGYDEGPGGTSGRGGGQGMAQGGYGGNQGDRGSKFGRTGNESNWQDQGMQ
GGGQGGGGVGGGGGGGMYNRGMDQHRGGFRGSPQGRGGSFRGRDGGFRGGRGR
NT seq 3222 nt   +upstreamnt  +downstreamnt
atggatggtggaatgatgatgatgcgtatgcctgccccggggcccccgatgttccggccc
cggaactttgttcccaggatggatcagcccaacccacagatgtctcaagtgaaatccacc
gaccaaaagggccaggctacggggctgagtttgccccagatccgtcaacagtttttaaat
cagcaaagtgctatgtttgatggcaagcgaatgagaaaggctgtccatcggaaaactgtg
gattacaactcttctgtgataagatatttacataaccgagtgtggcaaagggatcgtaga
gatgctgtatccattcagccagatgccctctatcaaatagatctggagcccccaatggca
actgttgaaaaccccatcaattctgttacaactaagtttgtgaggacgtcgaccaacaag
ttccgatgtccaatcttctgtgtgacatggacaccagaaggtcggcgtttggtcactgga
gcttccagtggggagtttacactgtggaatggccttgcatttaactttgagactattcta
caggcgcacgacacatctgtccgagccatgagatggagtcacaatgacatgtggatggtg
accgctgaccacgcaggcttcatcaagtactggcagtccaatatgaacaacgtgaagatg
taccagggtcacaaggaggcagttcgagggatcagtttttgcccaagcgacaataaattt
acaacatgtgcagatgacggaactgttcgtgtttgggactttatgagaggtcatgaagag
agaattctacgaggccatggtgcggacgtgaagtcagtggactggcacccacagaaagct
ctcattgcctccgggagcaaggacaaccagcagccaatcaaactctgggatccacggtcc
ggacagagtcttgccaccattcatgctcacaagaacactgtgatggatctgaagtggaac
cggaacggcaactggctgctgtccgcatccagagaccatctgctcaagctgtttgacatt
cggaacatgaaggaggagatccacacattcaaggggcacaagaaggaggctactgctatt
gactggcatcccattcacgaaggcctgtttgccagcggagggtctgacggtgctctcatg
ttctggatggtgggatgtgaccgtgaagttggcagtatggaggaggctcatgaaggaatg
gtgtggagcctggcttggcatcccctgggacacatcctggcatctggatctaatgaccac
agcacgaaattttggactcgaaatcgtcctggagacacaatgagagacaagtacaacctc
aacaacctacctactggcacagagcaggaactcctggagtatgatctggagccccagttg
atgcccagtttgccaggaatgggcctagagcatggtctgccaccacatctcagacctaaa
gaaaatgtggaggaggaactgccatctatacctggtctagactggtcagcagatgaaccg
ttccttcggcagtatgaacgtgactgtgcgcccaagaaaaaagtgccatatgccagacca
attcctaagtcttttgagaatgcatggaaaggcaataaacagtcaggggttctcgttcct
gaggagcaagagggcctacccgaaaagcccagttcacggaatgacccacggagaagggac
agaaaagaaaggcatggtcgaaataggagcccggatcgggggtcaaataggcatggacgt
gatcaagggggccgagatcatgatcgggatcaaggtcaagatcaaggacagaggtcacac
cagtttcaaggtcaaatgcaaaaaggtcctcaaggtcaaatgttgcaaggtcatcacaac
caaatgcaggggcagaacactatggggcagcctcagaattttcaaggtggcccaaatcaa
caaatgcaacccaatcagtttcaaggtgcatctccaggtttcatgccaaatcaaatgcag
ggtcaaggtcagtttagacagggaccaggattccaccaaatgcaaggcatgatgggaatg
caaggccctccaggcatgatgcaaggtcagggaggtccaggtccaggtcaaggtcagttc
atgggccaacagcagatgggaggtatgcagcagcagtttggaggtcaaactatgcagcaa
ggaattagaatgccacagcagcaacagcagcagcagaagcaacagcagcagcaacggcag
cagcagcagcagcagcagcagcggcctgactcccagcaacagatgcgcgatggtcagaga
ggtggtccgggacagcagtttgggggtcagcaaaacaacgggaatggagacatggacctg
agaggtcaatggtcaggtgggcgtggccaaggacagaggggtggggctgatgaagacttt
cgccaacgtagtaaccagcagcagcagcagcagcagtttggtcaggacagaagagaagga
tttggtggtgatcagcgtcgtttcgctagtggtgggggtgggagtggtgctggtgggggt
gggggtggtgctggtgctggggctggggtttgggctgggccggggtctgggggaggaggc
gggggtggtggaaagaattgggaaggagatatggacttacggcagcagagacaggaagag
ggaaggggacagttccaaggcaggcagcagaatgtggatgttgatgatcggtatggacgg
aggggtgggggggatgtagatgagaggcatcaaggagggaggcagggtggaaggggaggg
ggacgtattggtgggggcatgtatgacagtcagcaaggagggagagggggtggggacaga
agtggacaggacaggggagggcaggataggggaggacaagggttttatgacaggcaggat
caggatagtccgatgtcccagggaaggaagaggggctatgacgagggccctggaggtacg
tctggtcggggcgggggacagggaatggcacagggggggtatggtgggaatcagggggac
aggggctcgaagtttggccggacaggaaatgaatcgaattggcaggatcaaggaatgcag
ggaggtggtcaaggaggagggggagtgggtgggggtggtggtgggggaatgtacaaccga
gggatggaccaacaccgaggggggttcagggggagtccacaaggtagaggcgggagtttc
aggggccgggacggagggttcaggggaggtagaggaagataa

DBGET integrated database retrieval system