Haliotis rufescens (red abalone): 124137822
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Entry
124137822 CDS
T07893
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03030
DNA replication
hrf03420
Nucleotide excision repair
hrf03430
Mismatch repair
hrf03440
Homologous recombination
hrf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124137822
03420 Nucleotide excision repair
124137822
03430 Mismatch repair
124137822
03440 Homologous recombination
124137822
03460 Fanconi anemia pathway
124137822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrf03000
]
124137822
03032 DNA replication proteins [BR:
hrf03032
]
124137822
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124137822
Transcription factors [BR:
hrf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124137822
DNA replication proteins [BR:
hrf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124137822
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124137822
MMR (mismatch excision repair)
124137822
DSBR (double strand breaks repair)
HR (homologous recombination)
124137822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CompInhib_SCIN
GldN
Motif
Other DBs
NCBI-GeneID:
124137822
NCBI-ProteinID:
XP_046360245
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MPPQLSSGSIEEIIGGNTPDSPILQIMSSKKISAGGGADRYRLLLSDGKHSYSHAMLATQ
LNELMEQNEIDNLSVVQVNKYLCNTLQGDRRVMILLDVKVVKKGSEVGERIGNPVPFKPG
QENTAPVQPNGQSAVSNGPAQVNGVSNSSSAKSPYNRAQTTNRSPQKPSGGAGNYSIRGG
AGPSTPGSSRVHTIASLTPYQNRWRIRARVTQKSGIRTWSNSRGEGKLFSVNFLDESGEI
RATGFNEAVDRFYELLEVNKVFFVSRATLKTANKQYSNVQNDYEMTFNPDSQIEICNEEC
DLPTMTFEFVKINELDKHQSNALIDIVGVVKVCQDLSTVVGRQSQKEITKRDLQIVDQSG
MGVNLTLWGNDAQAFDGSASPVIAVKGARLSDYGGRSLSVLASSQLIVNPDIREAHMLRG
WFDRDGQSMDFDSYRNEGGGGGAGMATNWKTFQQVKSDNIASMDKADYFTSKGTVVFLKK
DNCMYKACPTEQCNKKLVDQGNGLYRCEKCAREFPNYKWRMILNANLADYSDNQWATCFQ
DSAEVLLSVKADELGSLRDSNEASFDQVFQDALFKSYIFKFRAKMEMYNDEQRLKTVCMS
ATPIDWTEYGKRLVDEINKLTG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcaactttcttccggttccattgaggaaatcataggtggcaacacacctgat
agcccaatactacagataatgagttccaagaaaatctcagcaggtggaggggcagacaga
tatcggctgctgttgtcggatggaaagcacagctactctcatgccatgttggcgacgcag
ttgaacgagttgatggagcagaatgagatcgacaatctgagcgttgtgcaggtcaacaaa
tacctgtgtaacacgctacagggggacagacgagtgatgatactgctggacgtgaaggtt
gtcaagaagggttcagaggtcggggagagaattgggaacccggtgcctttcaaacctggc
caagaaaacactgcaccagtacaaccaaatggacagagtgcagtttctaatggaccagct
caagtgaatggtgtcagcaattcgtccagtgccaagtctccatacaacagagcacagacc
acaaatcgttccccacagaaaccgtccgggggtgctggcaactacagtatccggggtgga
gctggaccctccacccccgggtcatctcgtgttcacaccattgcaagtctcaccccctac
cagaacaggtggcggatcagggctcgggtgacccaaaagtccgggattcggacgtggagc
aactcccgtggggaggggaaactgttcagtgtcaacttcctggacgagtctggagaaatc
cgggccacaggtttcaacgaggctgtcgacagattctacgagctcctggaggtcaacaag
gtgttcttcgtcagtcgcgccaccctcaagacagccaacaagcagtactccaacgttcag
aacgactacgagatgacctttaaccccgactcccagatcgagatctgtaatgaggaatgt
gacctccctaccatgacctttgaatttgtcaagattaatgaactggacaaacatcagtcc
aatgccctgattgatatagtgggcgtggtcaaggtgtgccaggatctatccacagttgtt
ggtcgtcaaagtcagaaggagatcactaagcgagatctgcagattgtcgaccaatcaggg
atgggggtgaacctcaccctgtgggggaatgatgcccaggccttcgatggcagtgcaagt
cctgtgatagctgtgaagggtgccaggctgtctgactatggagggcggtcgctgtctgtg
ttagccagcagtcagctgatcgtcaacccagatatccgagaagctcatatgctgcggggc
tggtttgaccgggatggacaaagcatggacttcgacagctaccgcaacgagggaggcggc
ggaggggcaggcatggccacaaactggaaaacattccagcaagtcaagtctgacaacatc
gcgtctatggataaggctgactacttcaccagcaagggaactgttgtgttcttgaagaaa
gacaactgcatgtacaaggcatgccccacagagcaatgtaacaagaagctggtggaccag
ggcaacggcttgtaccgctgcgagaagtgtgcccgcgagttccccaactacaagtggagg
atgatcctcaatgctaatctggcagactactccgacaaccagtgggctacctgcttccag
gattctgctgaggtcctcttgtcggttaaagctgacgagttgggaagcctccgtgattcc
aatgaagccagtttcgaccaggtcttccaagatgccttgttcaaatcctacatcttcaag
ttccgggcaaagatggagatgtacaatgacgagcagcgcctgaagactgtgtgtatgtca
gcaacaccaattgattggacagaatacggcaagcggttggtcgacgaaataaacaagcta
acgggttga
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integrated database retrieval system
