Haliotis rufescens (red abalone): 124138189
Help
Entry
124138189 CDS
T07893
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124138189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124138189
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124138189
Spliceosome [BR:
hrf03041
]
Complex A
U2 snRNP components
U2 related factors
124138189
Complex B
124138189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
DUF3928
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
124138189
NCBI-ProteinID:
XP_046360688
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MPRDSRSYRRRSRSRSLSRERSRRKRSRSRTPIRSRERERLRRSRSRDRERKRSRSRSRD
RDTKRDRRKRSRSKEKDRKREKKSKSRSPEKKVKSPSPSAEKVLHREGELRVKDEPLNKE
EEQKRLEVEMQKRRERIEKWRAERKKKQELLPINITPPMKKWTLEDDDEDEDEVVQENDK
DDENEVDPLDAFMQAVTDEVKCARDKDKTHDKSDNQKGANGNSAPAAAVSGKVTFITAVA
KKKDDTSKEKGEVMESNIDAMEYSSEEEEEDLDTTMSNMARKRKELTVVDHARIYYPSYR
KNFYVEVPEIAKLTQEEVDQMREDMEGIKVRGKNCPKPVRSWAQCGVSKKIMDVLKKHLY
ERPTPIQAQAIPAVMSGRDLIGIAKTGSGKTLAFLLPMFRHVLDQAELEDEDGPIAVVMT
PTRELALQISSECKKFSRTMGLRCVCVYGGTGISEQIAELKRGCEMIVCTPGRMIDMLAA
NNGRVTNLRRCTYVVLDEADRMFDMGFEPQVMRIMDNIRPDRQTVMFSATFPRQMEALAR
RILNKPLEIQVGGRSVVCKEVEQHVIILEDDKKFLKLLELLGIYQEHGSVLVFVDKQENA
DELMKELMRHSYPCLSLHGGIDQYDRDSTILDFKNGNIKLLVATSVAARGLDVKQLILVI
NYDVPNHYEDYVHRCGRTGRAGNKGFAYTFFTPEQERYAGDIIKALDLSNSPVPAELTQM
WNDYKERAKAEGRTIKSSSGFRGKGFKFDETEAQLADERRKLQKAALGLQDSDDEDAGMD
IDQKIEDMFASRKRVTDVAKPIANQQTQQQQSNQQKLELAKRLAARINMQRNLGPDAQDI
TQQAAAAILKGDSVAAPQVASKTIAEQMAEKIHAKIGYRPQAEEEKEQESAGETFKRYEE
ELDINDFPQTARWKVTSKEALAQICEYSEAGITVRGTYVPNDKDLKEGERKLYLAIEATS
ELAISKAKKEITRLIREELVRLQNCYIPNANKNRYKVL
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgcctagagatagcagatcctatagacggaggtcccgatcgaggagtttatcccgtgag
cgcagcagaagaaaaagaagtaggtcccgcacccctatacggtctagggaaagggagcga
ttaagacgctcacgatcgcgagacagagaacgtaagagatcaagaagcaggtcgagggat
cgtgacacaaagagagacaggagaaaacgatcccgttcaaaagaaaaggataggaaacga
gagaagaagtcaaaatccagatcccctgagaagaaagtaaagagcccgtctcctagtgct
gaaaaggttctccacagagaaggagaattaagggttaaagatgaaccactcaacaaggaa
gaggagcagaagcgccttgaggtggagatgcagaagcgacgagaacgtatcgagaaatgg
cgagcagagcgcaaaaagaaacaggaactgttgcccattaacatcactccccccatgaag
aagtggacgctggaggacgatgatgaagatgaagatgaagttgtgcaggagaatgataag
gatgatgaaaatgaagttgacccacttgatgccttcatgcaggcagtgacggatgaggtc
aagtgtgcccgtgacaaggacaagacacatgacaagagtgacaaccagaaaggtgctaat
ggtaacagcgccccagcagcagctgtgagtggcaaggtgacgttcatcacagcggtggcc
aagaagaaggacgacaccagcaaggagaagggggaagtgatggagagtaacattgatgcc
atggagtattcatcagaagaagaagaggaagatctggacacaaccatgtccaacatggcc
aggaagagaaaggagctaacagttgtggatcatgcccgtatttactatccttcctacagg
aagaacttctacgtggaagtgccagagatcgccaagctgacccaagaggaggttgatcag
atgcgagaagacatggaggggatcaaggtgagaggcaagaactgccccaaacctgttcga
agctgggctcagtgtggagtcagcaagaagatcatggatgtcctcaagaaacatctatat
gagaggccaacacctattcaggcccaggcaatcccagctgtgatgtcaggtcgggatctc
ataggtattgccaagactggcagcggtaaaaccctcgccttcctcctcccaatgttcaga
catgtgctggatcaagcagaactagaagacgaagatggtcccatagctgtggtgatgacg
cccacccgtgagctggcactacagatctcatcggaatgtaagaaattctccagaaccatg
ggactgaggtgcgtgtgcgtgtatggcggaacgggaatatcggaacagatcgcggagttg
aaaagaggctgcgagatgatcgtttgcacaccagggagaatgattgacatgttggctgcc
aataatggccgtgttaccaacctgcgccggtgtacgtatgtagttctagatgaggcagac
aggatgtttgacatgggatttgaacctcaggtgatgagaataatggataacattcgacct
gatcgtcagactgtgatgttttctgccaccttcccaagacagatggaggccttggcaaga
aggattctaaacaagccattagaaattcaggtcggaggtcggagtgttgtgtgcaaagaa
gttgaacaacatgtaattatcctggaggatgacaagaagttcttaaagctgctggagtta
ctgggcatctatcaggaacacggcagtgtcctggtgtttgtggacaagcaggagaacgca
gatgagctgatgaaggagttgatgcggcactcctacccctgtctgtctctacacggtggc
atcgatcagtacgatagggacagcactatcctggacttcaaaaatgggaacatcaagctt
ctggttgcaacgtccgtggcggcacgaggcctggatgtcaagcagctgatactggtcatc
aactatgacgttccaaaccactacgaggactacgtgcacagatgcggccggacaggacga
gcaggaaacaagggttttgcctacactttctttactcctgagcaggagaggtatgcaggg
gacataataaaggccctggacctgtccaactctcctgtacctgcagaactgacacagatg
tggaatgactacaaggagagagctaaggctgaggggcgaacaatcaagagctccagcggg
tttcgtgggaaagggttcaagtttgatgagaccgaggcccagctggctgatgagcggagg
aagctgcagaaggcagcactaggactgcaggactcagatgatgaggatgccggcatggat
attgaccagaagattgaagacatgttcgctagccggaagcgtgtgacagatgtggccaag
cccatagccaatcagcagacacaacaacagcagagcaatcagcagaaactggagctggct
aaacgattggctgctcgtatcaacatgcagcgcaacctgggacctgacgcccaggatatt
acccagcaggctgcagcagctatcttgaagggagattcagtagctgctccacaagttgct
tccaagactattgcggagcagatggcagagaagatccatgccaagatcgggtaccggcca
caggcggaggaggagaaggaacaggagtcggctggcgagactttcaaacgctacgaggag
gagctggacatcaacgacttccctcagacagccaggtggaaggtcacatccaaggaagca
ctggctcagatctgcgagtactcggaagctggcatcacggtgagaggaacctacgtgccc
aatgacaaggatctgaaagaaggagagcgcaagctgtatctggctatcgaggccacaagc
gagctcgccatctccaaggcgaagaaagagatcacacgtctcatcagggaggaacttgtc
agactgcaaaattgttatattccaaatgcaaacaagaatcgctacaaagtgctgtaa
DBGET
integrated database retrieval system
