Haliotis rufescens (red abalone): 124138475
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Entry
124138475 CDS
T07893
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrf03016
]
124138475
Enzymes [BR:
hrf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
124138475
Transfer RNA biogenesis [BR:
hrf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124138475
Prokaryotic type
124138475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
124138475
NCBI-ProteinID:
XP_048241099
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MQCTHGCEGLQEKQIRMLRRLSASLARIIKKTANMAEALDLSKHASPELGMEKRPLEKDE
KDAPDEQPAQKKVKQEQQVAPMQGRADRKRKVAILLAYCGKGYYGIQRNKGFDTIEEELL
KALLKNELIPQEHFDCPQKMSFQRAARTDKGVSAVGNVVSLKMLLNQDTLVDNINASLPP
QIRVIAYRRATKAFNSKNQCGGRTYAYMTPTYAFAPLKKFITAEYRITEDIITEVNRILA
MYKGTHNFHNFTSGIKPDDPSAKRYIISFECGQPFVTDGTEFVVLRVKGQSFMLHHIRKM
IGLMIAIVKGYCGEEVMEKAWQPDKVDVPKAPGVGLMLEQLHYDGYNKRFGKDGMHEALD
WSEYEDVLENFKKEHILSHIVKSEIEESVMLKWLGTMHFHKFDIKEEEVPRWKMFKIYGD
LSKEKGGKKQDGTDDSSDSADLTDSGTTLNKDNTVAAGDATVVTEDKSEMIMSGETKTQD
PKSEETTSDAKGEESGVKSGTVTDSNSKNCGEKVDTSPGSVVQS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtacacatggctgtgaggggcttcaggaaaagcagatacggatgcttcgacgt
ctatcagcttctctagctagaattatcaagaagacagcaaatatggcagaggcactggac
cttagtaaacatgcttccccagagctaggtatggagaagaggccgttggagaaggacgag
aaagatgcccctgacgaacaacctgcacagaagaaagtcaaacaagagcagcaggttgcc
cccatgcagggtcgggcagacaggaagaggaaggtggccatcttgctggcctactgtggt
aaaggatactacggtattcaaagaaacaaaggatttgacaccatcgaggaggaattgctg
aaagcgctactcaagaacgagctcattccacaggaacattttgactgtcctcagaagatg
tccttccagcgagcagcccgaactgacaagggtgtctcagccgtgggaaatgtggtgtca
ctgaagatgttgctcaatcaggacactttagtggacaacatcaatgcaagcttgccacca
caaatcagggttattgcctacaggagagcgacgaaagccttcaacagtaagaaccagtgt
ggtggccgaacatacgcctacatgacgccaacgtacgcgtttgcaccgctcaagaagttc
ataacagcagaatatagaatcacagaggatatcatcacagaggtcaacagaattcttgct
atgtacaagggaactcacaacttccacaactttacctccggcataaaacctgatgatcct
agcgccaagagatatatcattagttttgagtgtggccagccgtttgtaacagatggcacc
gagtttgttgtcttgagggtcaaagggcagagcttcatgcttcatcatatacggaaaatg
atcggactgatgatagccattgtgaaaggctactgtggcgaggaggtgatggagaaagca
tggcagccggacaaggttgatgtaccgaaggcccctggagttggtctcatgctggagcag
ctccattatgacggctacaacaagaggtttggcaaagatggaatgcacgaagcgctggac
tggtcagaatacgaggacgtgctggaaaatttcaaaaaggagcatattctctcccacata
gtcaagtctgagatagaggaaagtgttatgttgaagtggctcgggacgatgcacttccac
aagtttgacataaaggaagaggaagtgcctcggtggaaaatgttcaaaatctatggtgat
ctctcaaaggaaaaggggggcaagaaacaagatggtaccgatgactcgtccgattccgca
gacttgaccgacagtggaacaacattgaacaaggacaacacagtagcagctggggatgct
acagtcgtcacggaggacaaatcagagatgatcatgtcaggtgaaaccaaaactcaggat
cccaaatcagaggagacaacatcggatgccaaaggtgaggagtcaggtgtcaaatctggt
acagtgacagactccaactccaagaactgtggtgaaaaggtagacaccagtccaggcagc
gttgtccagagctga
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