Haliotis rufescens (red abalone): 124138571
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Entry
124138571 CDS
T07893
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124138571
04121 Ubiquitin system [BR:
hrf04121
]
124138571
Enzymes [BR:
hrf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124138571
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124138571
Ubiquitin system [BR:
hrf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124138571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
SGL
DUF5128
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_4
ANCHR-like_BBOX
zf-C3HC4_3
DUF5711
Motif
Other DBs
NCBI-GeneID:
124138571
NCBI-ProteinID:
XP_046361249
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MAAAFSDSFGEQLSCPLCLSRFDDPRVLPCLHTFCKKCLETELRDSGGGGGGGLGINFGC
PTCQQMVSLNSAGLESLPSNFFINNIIDVMVSHEDEFENGEQERDRGLTRWCSSCDEGSQ
ASSLCKNCNEYLCDNCVKAHQRVRLTKDHYIERLPKMRYSPPSLSHPDPSPTHFSDSSRS
LTSCDSHEHEVLRLFCDTCALAICRECTMSEHMGHSFIYLQDAIDNSKTITLKLLADAKA
GIKALEESIHLTQGMAERVEVRAQAVATEVRATTRRHMTALEERERELLRRVEKIRQVKA
KSLHLQVDDLKHGLSSLSQTVDEVEVLLNTGTDIDILKTKDRMVSEIQNMRRLRGHMQPH
EDDNILFTPPDAALYNAISKMGFISSSAYAPNSCATGDGLKRALKGKLALFMVHTKDHHG
EGRVMGGDPLEIIIQSPEGALYRTEVIDRQNGSYAVTYRPQTEGQHIISVTIRGKHIRES
PFTVNVRSGRNYAAIGRGIFQFGGEGDGDGKLCRPWGVCCDRDGYVIVADRSNNRVQVFS
PDGAFHHKFGSPGSRNGQFDRPAGVCVDLQGRIIVADKDNHRVQLFTFEGNFVLKFGEKG
NKNGQFNYPWDVAVNSDGKILVSDTRNHRVQLFTPDGQYLNKYGFEGPLWKHFDSPRGVC
FNNDGHIVVTDFNNHRLLVIHSDFQSARFLGTEGSGNGQFLRPQGVAVDQEGNIIVADSR
NHRIQVFQPNGNFLCKYGTQGAGPGQMDRPSGLCVSPDGYVIVVDFGNNRVEVF
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcattttccgactcgttcggtgagcagctgtcctgtcccctatgtttgagc
agattcgacgatccacgagtgttaccatgtctccatacattttgcaaaaagtgtttggag
acagagctacgcgattccgggggagggggtgggggtggcctcggcatcaacttcggttgc
cccacttgccaacaaatggtttccctaaactcagccggtctggaaagtctcccctccaac
ttcttcatcaacaacatcatcgatgtgatggtatcccacgaggacgagttcgaaaatggc
gagcaagagagggacagggggctgacaagatggtgcagctcatgtgatgagggaagccaa
gcttcatctttgtgcaagaattgtaatgagtatttatgtgataattgtgtcaaagctcac
cagcgtgtaaggctgactaaagatcattacattgaaagactgccgaagatgagatactcg
ccaccctctctctcccaccctgatccgtcacccacccatttttctgatagtagtcggtcc
cttacgagttgtgatagccatgaacatgaagtattacgactgttctgtgacacatgtgcc
ctagccatatgtagggaatgtaccatgtcagagcacatgggtcacagttttatctacctc
caggatgctattgataattccaagacaatcacactgaaacttttggccgatgccaaagca
gggatcaaagcattagaagaaagcatccacttaacccagggaatggcagaacgagttgag
gttcgtgcacaagcagtagcaacagaggtaagagcaacaacacgtagacatatgaccgct
ttggaagagagggagagggaattactgcgacgggtagagaaaatacgccaagtcaaagcc
aaatcacttcatttacaagtcgatgatttgaaacatggactttcatcactcagtcaaact
gtagatgaagttgaagtcctactgaatacgggtactgacattgacattttgaaaacgaag
gatcgtatggtctctgaaatacagaacatgcggcgtctcaggggccatatgcagccacat
gaagatgataacattctatttactcccccagatgcagccttgtacaatgccatcagtaaa
atgggctttattagtagcagtgcttatgcacctaattcctgtgcaaccggcgatggcttg
aaaagagctttaaaaggaaaactagctttgttcatggttcacaccaaagatcaccacgga
gaggggcgtgtgatgggaggcgacccactggaaatcatcattcaaagtccagagggagct
ctgtatcgaacagaggtcattgataggcaaaacggttcctatgctgtcacatatcgccca
caaacagaagggcagcatatcatctctgtcacaatccggggtaagcatatcagagagagt
cccttcaccgtcaacgtgagaagcgggcgcaactatgcggcaatcggacgtggcatattc
cagttcggtggtgaaggggacggagatgggaaactgtgtcgcccttggggcgtgtgctgt
gacagggatggttatgttattgttgcagaccgcagcaacaacagagtgcaggtgttcagc
ccggacggagcattccaccacaagttcggatcccctggctccagaaacggccagtttgac
cgcccagcgggcgtctgcgtagaccttcaaggacgtataatcgttgcagataaggacaac
catcgtgtgcagcttttcacgtttgaaggcaatttcgtgttgaagttcggagaaaaggga
aataaaaacggacagttcaactatccctgggacgtggcagtcaattctgatggtaaaata
ctggtgtctgacacacgcaaccaccgcgttcagttgttcacccccgatggccagtacctg
aacaagtatggttttgagggcccactctggaagcacttcgattcaccacgtggcgtatgt
ttcaataatgatggacacatcgttgtgacagatttcaacaaccatcgtctactcgtcatc
cactctgatttccagtcggcacgcttcctcgggacagagggcagtggcaatggacagttc
ctacgtccacaaggtgtcgctgtcgatcaggaaggaaacatcatcgtggcagattcaagg
aatcaccgaatccaagtgttccaacccaacggcaacttcctgtgcaagtatggcacccag
ggcgctggacctggccaaatggatcggccgtcaggtctgtgtgtctccccagacgggtat
gtgattgttgtggactttgggaataaccgtgtagaagttttttga
DBGET
integrated database retrieval system
