Haliotis rufescens (red abalone): 124138598
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Entry
124138598 CDS
T07893
Name
(RefSeq) small RNA degrading nuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124138598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrf03009
]
124138598
Ribosome biogenesis [BR:
hrf03009
]
Eukaryotic type
Pre-60S particles
RNases
124138598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
124138598
NCBI-ProteinID:
XP_046361291
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MENSKVISDFVRMSKRDKRLANKKRKAEVLIDLLSQTDVQRKRIKMTEGEISDDSQLKKV
QDGTCLSNSTGKTVSRKVLLHQLKKQRVKERRRLSKPAKTDTAERPALYLTLKELLEQQG
NTQVPRKEDEELPPLFMLDLQHLLTFALLPDSYKYYPRWCKLARPRKVASVVVIVIDQLS
SSDLEEYQECFPFMKKTFHIFTEMISPYQYGGSVMEDVFHVPVSKATMKVKAMSDQEGRI
KLKNQIDEVHNSQLRLQQSLGITVADIPAPAPDFDRTHLLLNPMQMMQDGYPMPVDTLKD
RYKDFKFSCNSYKSVSKKSPLFAIDCEMCLTSAQENELTRVSVVNEKLETVYDTLVKPYN
RITNYLTQYSGITKTMLLPVKTRLKDVQKHLKRLLPSDAIWVGQSLNGDLLALKLFHPYV
IDTSVIYNMSGIRWKKTGLKALTAQFLKQDIQTGSAGHSPVEDARAAMELVQLKMHKGLD
FGDATRSVVDLDPSSECCTKGVVEGVTGKGETATQVMDKRRLFFQQNKSCYNSLLALMAT
EKKTAAVIDKADTLSSNLSDVSVCCTVGSSDKARTEAAAQAVQKQDFVWVQLHALNQRTK
SNTANTGEEKVTAKSREEKETAASVRKTGDSDEEKEESMLREEGEKEGEDLIKRYMKRLD
KRVKRIAKKVRPKSLLCVVLSGQPSNKVIHNAGVLLKIT
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcaaaggttatatctgactttgtcagaatgagtaagcgtgacaaaagactg
gcgaacaagaaacgtaaagccgaagttctgattgatttactcagccagacagatgtgcaa
cgcaaacggataaagatgactgaaggtgagatatcagatgattcacaattgaagaaagtc
caagatggtacctgtctttcaaattccacagggaaaacagtgtcgaggaaggtgctgttg
caccaactgaagaaacaaagagtgaaagaaagaagaagattgagcaaacctgccaagaca
gatacagcggaacggccagctttgtatctcacactcaaggagttgctcgaacaacaagga
aacacacaagtgccccgtaaagaagatgaggagttacctcccttgttcatgttggatttg
caacatttattgacctttgctctgttacctgactcatacaagtactatccaagatggtgt
aagttggcacgccccaggaaggtggcctcagtggttgtcatagtgatagaccaacttagc
tccagtgatctggaagaataccaagagtgctttcccttcatgaagaaaacatttcatata
tttaccgagatgatctccccttatcaatatggcggctcagtaatggaggacgtgttccac
gtgcctgtcagcaaagccaccatgaaggttaaagccatgagtgaccaagaaggaagaatt
aaattgaagaatcagattgatgaggtgcacaattcccagttgcggctacaacagtccctt
ggcatcaccgttgcagatatcccagcgccggcgcctgacttcgacaggacccacctgctc
ctcaaccccatgcagatgatgcaagatggctaccccatgccagtagacacactgaaagat
cgctacaaggatttcaagttcagctgtaacagttacaaatctgtgtcaaagaaaagtcca
ctctttgctatagattgtgaaatgtgtctcacgtcagcccaggagaatgagttgacgaga
gtgtcggtggtcaacgagaagttagagactgtgtatgacacgttggtcaaaccatacaac
aggatcacaaactacctcacacaatacagtggcatcacgaagacgatgttgcttccagtg
aagactcgtctgaaggatgtacaaaagcacttgaagagactcctgccctcagacgccatc
tgggtgggtcagtctctcaacggggatcttcttgcactcaagttgttccacccctatgtg
atcgacacgagcgtcatctacaacatgtctggcatcaggtggaagaagactgggctcaag
gccctcacagctcagttcctcaaacaggacattcagacagggtcagcaggtcacagtccg
gtggaggatgcccgtgcagccatggaactcgttcagctgaagatgcacaaaggtttggat
ttcggggatgcgactcggtctgtggtagacctggatccctcgtctgagtgctgcaccaag
ggtgtagttgagggtgtgaccgggaagggggagacagccacccaggtgatggacaagagg
cgcctgttcttccaacagaataagtcctgctataacagtctactggctctcatggcgaca
gagaagaagacagctgcagttattgacaaggcggacacgctgtcatcaaacttgtcagat
gtgtctgtttgttgcaccgtcgggtcatcagacaaagccaggacggaggctgcagcgcag
gccgtgcagaagcaggactttgtgtgggtgcagctgcatgcactgaatcagaggacgaaa
agtaacactgccaacacaggggaggaaaaggtaacagcaaagtccagggaggagaaagag
acagcagcatctgtgagaaaaactggtgattctgatgaagagaaagaggagtctatgttg
agagaagaaggggaaaaggaaggcgaggacttgattaagagatatatgaagcgattagac
aaaagagtgaagaggattgcaaagaaggttcgaccaaagtcattgttgtgtgtggtgttg
tcagggcaaccaagtaacaaggtgattcacaatgcaggtgtccttctaaagatcacatga
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