KEGG   Haliotis rufescens (red abalone): 124138683
Entry
124138683         CDS       T07893                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
hrf  Haliotis rufescens (red abalone)
Pathway
hrf03082  ATP-dependent chromatin remodeling
hrf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    124138683
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124138683
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hrf01009]
    124138683
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hrf03021]
    124138683
   03036 Chromosome and associated proteins [BR:hrf03036]
    124138683
Protein phosphatases and associated proteins [BR:hrf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124138683
Transcription machinery [BR:hrf03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     124138683
    SWI/SNF complex
     124138683
Chromosome and associated proteins [BR:hrf03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    124138683
   PBAF complex
    124138683
   SWI/SNF complex
    124138683
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 124138683
NCBI-ProteinID: XP_046361408
LinkDB
Position
Unknown
AA seq 389 aa
MASVAKPEKEQPDKIVNTNGTKTFGDKPKCFAIEEGGETYYIGSEVGNYLRMFRGSLYKR
YPSMWRRLVTVEERKKIATMVFAGFGQHSLATNITLLKAVEVDEIFEGNDDKYKAVSISS
EPSFTRDSKTKRSTWVPTIPSSSHHLDAVPCSTPINRNRLGKGKVRTFPLCFDDTNPATI
HENAGQNESLIPIRLDMEFDGQKLRDCFTWNKNEKLISPEQFAEVLCDDLDLNPINFVSA
VAQAIRQQIEASPTDTIVEDQKDQRVILKLNIHVGNISLVDQFEWDLSEPENSPEEFSTK
LCAELGLGGEFVTAIAYSIRGQLSWHQRTYAFSEAPLPIVEVALRNQNEADQWCPFLETL
TDAEMEKKIRDQDRNTRRMRRLANTAPSW
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggcgtcggtagctaagcccgagaaagaacagccagataaaatagtaaatactaatgga
actaaaacatttggcgacaaaccaaaatgttttgcaatcgaggaaggtggagagacttac
tacatcggatcagaggtgggcaactaccttcgcatgttccgagggtccttatacaagcgg
tatccatcaatgtggagaagactggtgacggttgaggaaaggaagaagatcgctaccatg
gttttcgcagggttcggtcagcattctctggcgacaaacatcaccctgctgaaggcagtc
gaggtggacgagatcttcgagggcaacgacgacaaatacaaagctgtctccatcagtagt
gaaccgtcatttacgagagattcaaagacaaagcgcagtacctgggtacccacaattcca
agcagttctcaccatcttgatgctgttccctgttctacacccatcaatagaaacagactc
ggcaaaggcaaagtgcggacattccctctatgctttgacgacacaaacccagctactatc
cacgagaatgctggccaaaatgaatccctcatcccaatcagacttgatatggagtttgat
ggccaaaaactgagagactgtttcacatggaataaaaacgaaaagctcatctcacctgaa
cagtttgctgaagtattatgtgatgaccttgaccttaacccaatcaactttgtgtcagct
gtggcccaagcgatccggcagcagatcgaagcatcgcccacagacactatagtggaggac
cagaaagatcaaagagttatacttaaattaaacattcatgtaggaaatatctcactagtg
gaccaatttgagtgggacctctccgagccagaaaacagtcctgaggagttctccaccaaa
ctgtgtgcagagctaggtcttggtggggagtttgtgacggcgattgcatatagtatacga
ggtcagctgagctggcatcaaagaacatacgccttcagcgaggcaccactgccaattgtt
gaagttgctctcaggaaccagaacgaggctgaccagtggtgtccattcctggagacactg
accgatgcagaaatggagaagaagatccgagatcaagacagaaacacaagacgtatgcga
agattggccaatacagcaccttcctggtga

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