Haliotis rufescens (red abalone): 124139568
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Entry
124139568 CDS
T07893
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrf01002
]
124139568
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrf04121
]
124139568
Enzymes [BR:
hrf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124139568
Peptidases and inhibitors [BR:
hrf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124139568
Ubiquitin system [BR:
hrf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124139568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
TcaA_3rd_4th
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
124139568
NCBI-ProteinID:
XP_046362698
LinkDB
All DBs
Position
Unknown
AA seq
2619 aa
AA seq
DB search
MTIVMRGSPAGGDSPQENSPPQTGQAPQQQQPTTQQPQQQQPPTSQPSQTQQPPKEALPQ
QQQQQQQQQQQSTSGGPSQIATQHDEGGQGDGIVVPPDDQEPEFPHVELAKLDEMINRPR
WVVPVLPKGELEVLLEAAIKLSKDGLDVRSEACQRFFREGLTISFTKILTDEAVSGWKYE
IHKCILKNAEKLIELCVAKLSQDWFPLLDLLAMVFSPQCKFHTYNGTRPSESVPAGTQPS
EESLFARPPDPRTPRGWLVDLVNKFGGLEGFQILLDRFIKAPALSVPIIAALIKPFGQCA
EVLTPHTVQKYFMPIVDIVPKFLDKLTDDELKKESKTEAKNDALSSIIKALKQLVYRLPN
QDETIKELEIFRLKMILRLLQISSFNGKMNALNEVNKVITNVSFHASRHTQVEEDEWLTA
EKMAEWIQQNNVLSIVLRDSLHQPQYVEKLEKILRFMIKEKALTMEDLDRLWEAQSGKHD
AIVKNVHDLLAKLAWDFTPEQLDHLFECFQGSWNNATKKQREKLLELIRRLAEDDKEGVM
AHKVLTLLWNLAHSDDVPTEIMDQALTAHIKILDYSCSQDRDAQKMQWINRFVEELKNDK
WVLPSLKQIREICQLFPEAPQNFPHTQRSPHMYYRNSVIGQLQNQHSIVMLVSQNLSAYM
NKARQHNKEHPEEEPLHILPDGRFNHVMQVQERLRFLRFLLKDGQLWLCEPQARQIWHCL
AENAIYITDRESCFKWFAKLMGEEPDLDPEITRDFFERNILQLDPALLTENGMNCFERFF
KQVNLKENKLIAKRRGGHMMDDLELIGLDYMWRVVLWSPDEVAEKAIALLKDIFTNLGPR
LQQNQIEIHEDFIQSCVDRLKASFDTVSVLEKDADSTSRVMQETIRMVRILTVLKEYVAE
CDEAYGEERTILPLSRACRGKLVTLKVRFPNQGRQVEDLEVWSHSNDTVGSLRRYILSRV
KANANNIKVDLYVNGEQLDPSEDKKLISQIPLRDKMTVTAKLVQVGSNMPSSPDSSSDSS
VGSPHNAYDGPNVEAENSLPGVLMAQDPRYAQFLFQLSDLGGQLQVPKLRDTARAVLKLM
PADGTTVQKFRAICSENAKADGTVAVTLEALFFNSSPTQVLYNIETAYSLLMPAVDPLVE
EAFEFQLNFVRSGGVQLSINMLTKNNFLPNADLPTRRAAYLTVLKVCKLMLTTVGHAKVQ
VVVDACHSESQVPAVSVVEHNQAAALQQALLHIPSPDAEFTTRNVALRLGQNLGEQATGV
LPDLATVKSIQKIAWAASSCSLHLVHASIEDIHRAHEKPKDCMPSDMEDIGVAREALEVL
TVCLALFPAALDALHKDKAWQCFIIDLLLLCRSSRSVRICASDQFFLMATRCSTSHRPQH
FMITLLFTVLSTTAKDNAKQSHEYFQLLCRLLSYAFASEASLSTAEALLNNEIAWLKKVR
DYVLNGSEVQTEEALLEGHLGITRELLAFQSPEKKFNIGSEKGGANLIREIVEDFIFPAS
KIVLQCRKLNGDFPAEQAVPVCSSPVTVIAAFDLLVALCTGCVHNLRFLAAMIIDMYYTN
ETPLSEWEYLPPVGPRPSKGFVGLKNAGATCYMNSVLQQLFMIEPIRNGILGVEGAADDI
EEEFMNDEKAEGETNVDISEEEKKDDDKGNKVEERKDYHMGVLKQIQVIFGHLAASRLQY
HVPRGFWKHFKLWGEPVNLREQHDALEFFNSLVDSLDESLKVLGQPMAMTKVLGGSFADQ
KICKDCPHRYQREEAFTTLNVDIRNHQNLFESLEQYVKGDLLEGANAYHCEKCNKKVDTV
KRLVIKKLPKILAIQLKRFDYDWERECAIKFNDYFEFPRKFDMEPYTVQGLAKIEGEIID
GDLDESPQSTKYKLIGVVVHSGQASGGHYYSYILHRGAADPHPKWYKFDDGDVTECKMDD
DDEMKNQCFGGEYLGEVYDHMLKRSAVRRQKRWWNAYILFYERIDEDEKEETLSKELLKL
SLSSTVSHVMMPSAIDRLVRKQNILFMHEKNQFSMEYFQFMKKLLTCNHITLNHAIQEKM
TQEAEQIAMISVELASKFLFNVGFHTKKTLRCSASEWYDALHIHLRYSKSVRSWFAHNVL
FAHPSRFAEYLLECPSSEVRSAFAKIIVILAHFSLQDGPCPPPLVQGLYAAGQAADPNAT
LSDHLLVAVLALMRKEVSEHGRHLQQYFHLFLMYLNLGIQEKQQLLRLNVPAQFIMVALD
EGAGPPIKYQYAELSKLYSVVSHLVRCCDVSARCQCSVNGQPPLPNPHGDQHCPQPLMEI
QSQVEEVLFGRTSYVKKLIEECNNTEDTTKLLKFCCWENPHFSSTVLSELLWQVAYSYTY
ELRPYLDLLLQMLMLEDSWQNHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKMM
VALFTHCAPAAQMLQSNGDLKRKWSGAVDWLTDELERRPYPGNAQYTYNNWSPPAQSNET
SNGYFLERSQSARITLAKAYELCPEEEQEEGELTDEQEVANQEDPVPGFPQQPGNQPQPQ
PQPQPQGSQQQQPPQQQQQQQQQAPQQQQQAPQPQQHVQNNQIHMQPVAHPVQPSNQINN
QLNQQGQQQAPPPGQQPPPTDNQEMGEEGGENSHRGVSE
NT seq
7860 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagttatgcgtggaagcccagctggaggggattcccctcaagagaattcccct
cctcagacaggccaggctccccaacaacaacagccaacaacacaacagccacaacaacaa
caacccccgacttcacaaccatcacagacacaacagcctcctaaagaagctctaccccag
cagcaacagcagcagcagcaacaacaacagcagtccacaagtggaggtccaagtcagatt
gcgacccagcatgatgaaggaggtcaaggtgatggaatagtggtgcctcctgatgaccaa
gaacctgaattcccccacgtggagttggcaaaactagatgaaatgattaaccgacctcga
tgggttgttccagtgctgccgaaaggagaacttgaagttcttctggaagctgcaattaaa
ctgagcaaagatggattggatgtaagaagtgaggcttgtcaaagattctttcgtgagggt
cttacaatatctttcacaaagattctcacagatgaagctgtcagtggatggaaatatgag
atacataaatgtattttgaaaaatgctgagaaactaatagaactctgtgtggctaaatta
tcacaagactggtttcctctcttggatcttctggccatggttttcagccctcagtgcaaa
ttccacacttacaatggaactcggccgtcagagagtgtaccagctggaacccaaccatcg
gaggaatctctgtttgcaagacctccagacccaagaactccaaggggttggttggttgac
ttggtaaacaagttcggaggcctagaaggctttcagattcttctggacagattcatcaaa
gctccagctctctccgtaccaattattgctgcacttattaaaccatttggacagtgtgct
gaggtactgacaccacacactgtacagaaatacttcatgcccattgtggatattgtacca
aagtttcttgataaactgactgatgacgaactaaagaaagaatcaaagactgaggcaaag
aatgatgctctgtcatcaatcatcaaagccctgaaacagcttgtgtatcgactccccaac
caggatgagacaatcaaagaactggagatatttagactcaagatgatactgagactgctg
cagatatcatcgttcaatggcaagatgaatgcacttaatgaagtgaacaaggtgataacc
aacgtgtcattccatgctagtcgccatacccaggtagaggaggatgagtggctaactgcg
gagaaaatggctgaatggattcagcagaacaacgtactgtcaatagttctccgcgacagc
ctgcatcagccccagtatgtggagaagttggaaaagattctccgcttcatgatcaaggag
aaggctcttaccatggaggacctggaccggttgtgggaggcccagtcagggaaacatgat
gctattgtgaagaatgttcatgacctgctggccaaactggcatgggattttacccccgaa
cagctggaccatctgtttgagtgcttccagggtagctggaataatgctactaagaaacag
cgtgagaagctccttgagttgatccgccgtcttgccgaggatgacaaggaaggtgtgatg
gcccacaaggttctcactctgctgtggaacctggcccacagtgatgatgtccccacagag
atcatggaccaagctctcactgctcatatcaagatcctagattacagctgctctcaggac
cgagatgctcagaaaatgcagtggatcaacaggtttgtagaggagctgaagaatgacaag
tgggtgttgccgtcactgaagcagattcgggagatatgtcagctgttccctgaagctcca
cagaacttcccccacacacagaggtctccacacatgtactataggaacagtgtcattggt
cagctgcagaatcaacattcaattgtcatgcttgtttctcaaaatctctctgcatacatg
aacaaagccagacagcataacaaagaacatccagaagaggagcctcttcatattctaccc
gatggaagattcaatcatgtcatgcaggtgcaagaaagactaagatttctcagattcctg
ctgaaagatgggcagttatggttgtgtgaaccccaagcaagacagatctggcactgtttg
gctgagaatgcaatttacatcacagacagggagtcatgtttcaaatggtttgcaaagttg
atgggagaagaaccagatctggaccctgaaatcacgagagatttctttgagaggaacatt
ctccagcttgacccagcactgctcacagaaaatggaatgaactgttttgaaagatttttc
aagcaagtaaatctgaaggaaaacaagctgattgccaaacgaagaggaggtcacatgatg
gatgacctggagttgataggactggattacatgtggcgggttgtgctctggagtccagat
gaagttgctgaaaaagcaatcgctcttttgaaagacatttttaccaaccttgggccaagg
ttacaacagaatcaaattgagattcatgaggactttatacaatcatgtgttgatagacta
aaagcctcgtttgacacagtgagtgtgttggagaaggatgctgatagcaccagtagggtg
atgcaggagacaatacgcatggtgaggattctcacagtgttgaaggagtatgtggcagag
tgtgatgaagcttatggggaggaacgcaccattcttcctctcagcagagcatgtcgtggc
aaactagtaactctaaaagttaggttccccaatcaggggagacaagttgaagatctggag
gtatggtctcacagcaatgatacagttggctcattacggagatatatcttatcaagagtc
aaggccaatgcaaacaacatcaaagtggatctctatgtcaatggtgaacagctggaccca
agtgaagacaagaaactaatttcacagattccacttcgagacaagatgactgtaacagcc
aagctggttcaagttgggagcaacatgccctccagtccagacagtagctcggacagctct
gttgggtcgccccacaacgcctatgatggacccaatgtggaggctgaaaacagcctgcca
ggagtgctgatggctcaagaccctcgatatgctcagtttctcttccaactgtctgacctg
ggtggtcagctgcaagtaccaaaactacgagatacagccagagcagtactcaagctgatg
cccgctgacgggacaactgttcagaaattccgagcaatttgttctgaaaatgccaaggct
gatggaactgtggcagtaacccttgaagcattgttcttcaattcttctcctactcaagtg
ctctataatattgagactgcttacagtttgctgatgcctgcagtggatccattggttgaa
gaggcttttgagtttcagttgaactttgtgaggagcggaggtgttcagctttccatcaac
atgctgaccaagaacaactttttgccaaatgctgacctgccaacacgaagagctgcatac
ctgactgttctgaaggtgtgtaagttgatgctgacgacggtgggtcatgcgaaggtacag
gttgtggtggatgcttgtcactccgagtcccaggtgccagctgtgtctgtcgtggagcac
aaccaggctgcagcattacaacaggctctgctacatattcccagtcctgatgcagagttc
accaccagaaatgtggcattgagacttgggcagaatctaggagaacaggccactggtgtg
ttaccagacttggcgacagtgaagtccatacagaagatagcctgggcagctagtagctgt
tctcttcatcttgtccacgcctcaatagaggatatacatagagcacatgagaaacctaaa
gactgcatgccctctgacatggaggatatcggagtggctcgagaagccctagaagtgctg
acagtgtgtctggcgctgttccctgcagcactggatgctctacacaaggacaaggcctgg
cagtgcttcatcattgatctgctgctcctctgtagaagcagtcgatctgtgaggatctgt
gcctctgaccagtttttcctgatggccacacgatgcagtacaagtcacagaccccagcat
ttcatgattactctgctcttcacagttctgtcgacaactgcaaaagacaatgcaaaacag
tcacatgagtattttcagcttttatgtagattattaagttatgcatttgcgagtgaagct
agtctctctacagcagaagcgttgctgaataatgaaatagcatggttgaaaaaagtcagg
gactatgtgttgaatggttccgaggtgcagacagaagaggcgttacttgaggggcacttg
ggcatcacacgagagctccttgcgttccagtccccagagaagaaattcaacattggctca
gagaagggaggagctaatctcatcagggaaatagtagaagattttatcttcccagcatcc
aagatagtcttacagtgtcgcaaattgaatggtgattttccggcagagcaggctgtgcct
gtctgctcttcccccgtgactgtgatagcagcttttgatctcctggtagcgctgtgcact
ggctgcgtgcacaacctgcgcttccttgccgccatgatcattgatatgtattatactaat
gagaccccattgtcagagtgggagtacttaccacccgttgggccaaggccatccaaaggc
tttgttggtttgaagaatgctggtgcaacatgttacatgaattctgtattacaacaattg
tttatgattgagccgatccgcaatggtattcttggtgtggagggtgcagctgatgacatt
gaggaagagttcatgaatgatgaaaaagcagaaggggagacaaatgttgacataagtgag
gaggagaagaaggacgatgacaaggggaacaaggtggaggagaggaaggactatcacatg
ggggttctcaaacagatccaggtcatcttcgggcatctcgccgcaagcagactgcagtat
catgtaccaaggggcttctggaaacacttcaaattatggggagagccggtcaacctgaga
gagcaacatgatgctttagaattcttcaacagtctagtcgacagcttagatgagagttta
aaagttttaggacaaccaatggcaatgacaaaggttttaggaggatcgtttgctgatcag
aagatttgtaaagattgtcctcataggtatcaaagagaagaagctttcacaactctgaat
gtagatattaggaatcatcaaaatctgtttgagtctctagaacagtacgtcaaaggagac
ttgttagaaggtgccaacgcatatcactgtgaaaaatgcaacaagaaggttgatacagtt
aaaagacttgtgataaagaaactgccaaaaatcctggccatccagttaaagagatttgac
tatgactgggaaagggaatgtgcaatcaagttcaatgactactttgagtttccacggaaa
tttgacatggaaccctacacagttcaaggtcttgccaaaatagaaggagaaataattgat
ggtgatctagatgaaagtcctcagagcaccaagtacaagttgataggtgtggtggttcac
agtgggcaggccagtggaggacattactactcctatattctacacaggggtgctgctgat
cctcatccaaagtggtacaagtttgatgatggagacgtcacggaatgcaagatggatgat
gatgatgaaatgaagaatcagtgtttcggaggagaatatttgggagaagtgtatgaccac
atgctaaaaagatctgcagttaggcgccaaaagagatggtggaatgcatacattctgttc
tacgagaggattgacgaagatgaaaaggaagaaacattgtcaaaagaattgttgaaactc
tcattatcaagtacagtgtcacatgtgatgatgccgtcagccatcgacagacttgttcgg
aaacagaacatcttgttcatgcacgagaagaaccagttctccatggagtacttccagttc
atgaagaaacttctcacatgcaatcatatcacactcaatcatgccatacaagagaaaatg
acacaggaagcagaacagatagctatgatcagtgttgagttagcatctaaattcctcttc
aatgtgggctttcatacaaagaaaacactcaggtgctctgctagtgaatggtacgatgca
ctgcatatacacctgagatacagcaagagtgttcgcagctggtttgcacacaatgtgctg
tttgctcacccatctagatttgcagagtacttactagaatgtcctagttctgaggtgcgg
agtgcatttgcgaagattattgtgatactggcacacttctccttgcaagatggaccatgt
cctccacccttggtacaggggctgtatgctgctggccaggctgcagaccccaatgccaca
ttgagtgatcacctgctggtggctgtgctagctctcatgaggaaggaggtgtcagaacat
ggcagacatctgcagcaatacttccacctcttcctcatgtacctcaacctcggcatacag
gagaaacaacagttgcttcggctgaatgtgccagctcagtttataatggtggctctagat
gaaggtgcaggtcctcccatcaagtatcagtacgctgaactcagcaaactctactcagta
gtgtctcatctagtgcgatgctgtgatgtgtcagcaaggtgtcagtgctcagtcaatggt
cagcctccactgcccaacccccacggtgaccagcactgtcctcagccactgatggagatc
caatctcaggtggaggaggtgctgttcggtcgtaccagctacgtgaagaaactcatagag
gagtgtaacaacacagaggacaccaccaagctgctgaagttctgttgctgggagaaccct
cacttctcttccacagttctcagtgagcttctttggcaggttgcctattcctacacatat
gagctcaggccatacttagatcttctcttacaaatgttgatgttggaagactcctggcag
aaccacaggatacacaacgcactgaaaggcatcccagatgatagagatgggctgtttgac
acaatccaaagatcaaagaatcactaccagaagagagcgtaccagtgtataaagatgatg
gttgcactcttcacacattgtgcacctgctgctcagatgttacaaagtaacggagatctc
aagcgaaagtggagtggagcagttgactggttaacagatgagttggagagaagaccatac
ccgggaaatgcacagtacacatacaataactggtctccgcctgcccagtcaaatgaaaca
tcaaatggctacttcctggaaaggtcacagagtgcaaggatcacactagcgaaggcctac
gagctgtgcccagaagaggaacaagaggaaggggagctcaccgatgaacaggaggttgcc
aaccaggaagacccagttcccggattcccccagcaacctggcaaccagccacagcctcag
ccgcagccgcagccacagggctctcagcaacagcagccaccccagcagcagcagcagcaa
caacaacaagcgccccagcaacaacaacaagcaccccagcctcaacagcatgtgcagaac
aaccagatacacatgcaaccagttgcacacccagtgcagcccagtaatcagatcaacaac
cagctgaaccaacagggccagcagcaggcaccacctccaggccaacaaccaccacccaca
gacaatcaggagatgggggaggaagggggagagaactcacacagaggcgtgagcgagtga
DBGET
integrated database retrieval system
