Haliotis rufescens (red abalone): 124139631
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Entry
124139631 CDS
T07893
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrf03000
]
124139631
03036 Chromosome and associated proteins [BR:
hrf03036
]
124139631
Transcription factors [BR:
hrf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124139631
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124139631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
124139631
NCBI-ProteinID:
XP_046362823
LinkDB
All DBs
Position
Unknown
AA seq
2039 aa
AA seq
DB search
MEGSSSKGSSKRKPAFTMKIKVSGKKKHESDSDNDDYDSDYSKRKSRSKRDNSDISDAES
IPDLPEGTVVVKPEPVKEKKIRFSGPEFSKVPDNLDIVNCTSCGRQINPNVSGAAKRHPE
LKVLICRKCYSYYRSGKIEQDEDGLDEQCRWCGEGGRLLGCDHCHNAFCKSCIIRNFSRA
ELTTVMADDGSKWKCYVCDPSKLKKLLRECDSLFKKIEKEKLKAKMQSSTDSKKSNSSKP
QKATGKSMSSKEHVTSKTHKDLVSIANFTVGTSNVVNVSTQLLGLTAGFHTMLEVLNVDL
NTSGDVKNSSREANSKKDHGAKTLDTGLKEFLKSVNTILCDALESKEKAPVENGETTEDE
SVVSNGHISLSDDDNSAAQTEEEVKVSRKSAREGRQVRKGSKTEEKAPIKNRDGRKDVSK
SSLRKESKMDVSVDDVVSNEVCDVDNDSDEFDVPVSFGPTDGAGDGHTVSKDEQTESKSD
ESESQTKDDNDGVKGSRPLSETENEAAQLELLKELAEEMCKEQKERKEEKINGEESSKVK
VPEKKKRELEKDKSEVTKEDIKDKNGDVKDKSGDSSKSAEDSSVDDSVSSSDLLMSSDSD
FAQSWSMKKRKEKGQRKSGRTEDKLERKKRKKQKKEKAERRSSRKRKEEKKLRKKKPKAT
DSEDDLEKEISKLEEEPEMKKKTKKEKTDSEEDLDEATTCKKEKNKEKKKEASDEEKKGR
KTRGKKKTETSSSDDGDDDNEVDDDEDEDDDDVLKMKNGKNRTPESANGKDLENEVAKKA
LMAELEDADEEGGDESGNDDSESDDDAKKKKKGAKKEKKPVKEENDDSENDSENEDSDAV
PSTRKRIRSKLLDAKLSGSDSAKDRKSKKKKQKSEESDSEEIVIKKKSKKKKSSDEDYSS
DSSSGKKKKGKRKKKQQKKKKRGKKRKLTSDSESGDSSSSSSASDSDSEISLDTEEEERR
EKLKAERKARRKAKGNKRRRIKEQKDSSDEKGRIETDSDIDGSDDDDDDDDDDDDGKSPD
KSGRKNIRKIKSDKKLTDDTKRARKAEECRRKRVTERQKEFNHVVQITDETTKCPITTQL
ILEMDKEKKEPIIQVNKKLVRKLKPHQVEATQFMWDCLCETSDRIKKKEGSGCILAHCMG
LGKTLSVISFVHTMLSNEKCTSMRTCLIVCPLNTVINWSNEWVMWFDEKDQLDVYEISSV
KQNWPRADYLKDWHEGGGIMIMGYEMYRNLTQSARIKNKKLKAIFLKTLVDPGPDLVVCD
EGHILKNDSSSISQALNKVRTRRRVVLTGTPLQNNLLEYHCMASFVKPNLMGTRKEFLNR
FVNPITNGQHSDSTAFDVKVMGRRAHVLHEMLAGCIQRRDYSALTKFLPPKFEYVISVRL
SPVQIDLYEKYLELAGIGVDGGPTTNNRGARLFSDYQNLMKIWTHPWVLKLAEIRADNRM
KYDDSEDSFIDNSTDEEMASMTDNSEDSVMNVSKSDSGESVEAGPSNRGSRRSRRGKPPP
EDSDKEEVVKDWKTRSRGGEDDGIEIDDGPKPVSSEWWAEYVKEEDQSNLDLSGKLLLLF
EILRMCEEIGDKVLVFSQSLLSLDIIEYFLDFIDKKAEEAAMQKEEERLKKEKEKEEKEK
EEKGKEKDGKEKEGKDQNGEAKDGEKKEDGEKKEDGEKEDESEEFVQTVFGKSWTKGADY
FRMDGSTSPQLRSQWSDHFNDPENFRSRLFLISTKAGSLGINLVAANRVIIFDASWNPSH
DIQSIFRVYRFGQTKPCYVYRFLAQGTMEEKIYERQVTKQSLSQRVVDEHQIDRHFTSAD
LSELYHFKPERLDDPNQPKTIHALPKDVLLAELLKQDKQIVRFHEHDSLLENRADQTLTE
EEKKAAWEEYDNERKGMTNRVAQASTASGVGMFSPDNVLQIVQMVKMRFPNLPPDLFQAQ
VQAILQQQILYQQSMQNQQIEQQRLMEMHRLQRIQNDIRSQQRQIQVLNRNRLAYPRGGG
AMGPRMGMSSGTQPRIPNQAGALRSILTTPSGSTGKKDASHSRSTTPNNPPVVIDLSKS
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcaagctcaaaaggctcctccaagaggaaaccagcatttaccatgaagata
aaagtgtctggtaagaagaaacacgagagtgactccgacaatgatgactacgattctgat
tattccaaaaggaaatctaggtcaaagagagacaactctgacatttcagatgctgagtcc
atacctgacttgcccgaaggtactgttgttgttaaaccagaacctgtgaaagaaaagaaa
atacggtttagcggaccagaattttccaaagtaccagataacctggacatcgtcaactgc
acgtcctgtgggaggcagatcaaccctaatgtgtctggagctgctaagcgacacccagag
ctgaaagttctaatatgcaggaaatgttacagctactatcgcagtgggaagattgagcag
gacgaggatggattggatgaacagtgtcgatggtgtggggagggaggaaggctcctcggt
tgtgatcactgtcacaatgctttctgcaagtcctgtatcattagaaacttcagccgggcg
gaactcaccacagtcatggctgatgatggatctaagtggaagtgctatgtgtgcgaccct
tctaaattgaagaaattgttgcgagaatgtgactctttgttcaaaaagattgaaaaggaa
aagctgaaagccaagatgcagagcagtacagactccaagaaatcaaacagtagcaagcct
cagaaagcaacgggtaaatctatgagtagtaaagagcatgtcaccagtaaaacacataaa
gatttagtgtcgatcgccaatttcacagtaggtacatcaaatgtagttaacgtttctacc
caactgttagggttaacagctggctttcatacaatgttggaagttctaaacgttgatctt
aatacatcaggagatgttaaaaatagcagtagagaggctaatagtaagaaggaccatggt
gccaaaaccctggatactggcctcaaggaattcctcaagtctgtcaatacaatcctatgt
gatgccttggaatctaaagagaaagccccagttgagaatggtgaaaccaccgaggatgaa
agcgtagtttccaacgggcatatttctctaagtgatgatgacaatagtgctgcacaaaca
gaggaggaggtgaaggtcagtaggaaaagtgctagagaaggtcgacaggtcagaaagggg
tcaaaaacagaggaaaaagctcccattaaaaacagggacgggagaaaagacgtgtcaaag
tcttctttaaggaaggaatccaaaatggacgtcagtgtagatgatgttgtatctaatgaa
gtctgtgatgtagacaatgattcagatgagttcgatgtcccagtctcatttggaccaact
gatggagcaggggatggccatactgtaagtaaagatgagcagactgaatctaaatctgat
gaatctgaaagccaaacaaaggatgacaatgatggtgttaagggctcgaggcctctaagt
gaaaccgaaaatgaggcagcccagttggaattgctgaaagagttggcagaggagatgtgt
aaggaacagaaagaaaggaaggaagagaaaattaatggggaggaatcaagcaaggtgaag
gtccctgaaaagaaaaagagggaacttgagaaggacaagagtgaggtcacaaaggaggac
atcaaggacaaaaatggggacgtcaaggataaaagtggggacagttctaagagtgccgag
gattcatcagtggatgacagtgtgtcgagctcagacctcctaatgagttctgacagtgat
tttgcccagtcatggagtatgaagaagagaaaggaaaaaggtcagagaaaatcaggaaga
acagaagacaaattggagagaaagaaaagaaagaagcagaagaaggaaaaggctgagagg
agatcttctaggaagaggaaagaagagaagaaattgaggaaaaagaaacccaaagccact
gatagtgaagatgacctggagaaggaaatttcaaaacttgaagaagaaccagaaatgaag
aagaaaacaaagaaggagaaaacagactcggaggaggacttggatgaggccactacgtgt
aagaaggaaaagaacaaggaaaagaagaaggaagcgtctgacgaagaaaagaaaggtaga
aagaccagggggaagaaaaagacggaaacatccagctcggatgatggtgatgatgacaat
gaagttgatgatgatgaagatgaagatgatgatgatgtgcttaaaatgaagaatgggaag
aacaggacacctgaatcggcaaatggcaaggaccttgagaatgaggtagcaaagaaagct
ttgatggcggagttggaagatgctgatgaggagggaggcgatgagagtggcaacgatgac
agcgagtcagatgatgatgctaagaagaagaaaaagggagccaagaaagagaagaagcct
gtgaaggaagagaacgatgatagtgaaaatgacagtgaaaatgaggattctgatgctgtg
ccaagtacaaggaaaagaatacgtagcaaactgttagatgctaagttgtcaggcagtgac
tctgctaaagacaggaagtctaagaaaaagaagcagaaatcggaggagagtgattctgag
gagatcgtgatcaagaaaaaatcaaagaagaagaaatcatcagatgaagattattcaagt
gattcaagttcaggcaagaagaaaaaaggaaagagaaaaaagaagcagcagaaaaagaag
aagagggggaaaaagaggaaactgacaagtgactctgaatccggggattcatcatcttct
agttccgcaagtgattccgacagtgagattagcctggacacagaggaggaggagaggcgg
gaaaagctgaaggcagaacgcaaagccaggcggaaagctaaggggaataagcgccgtaga
atcaaggagcagaaagactcttctgatgaaaaggggagaatagagacggattcagatatt
gatggaagtgatgatgatgatgatgacgacgatgatgatgatgatggcaaatcaccggac
aaatctggcaggaagaatattcgtaagatcaagtctgacaagaaactaactgatgatact
aagcgtgcccgcaaagcagaggaatgcaggaggaagagggttactgaacgccagaaagag
ttcaaccacgttgtgcagataacggacgagactaccaagtgccccatcaccacacagttg
attctggagatggacaaggagaagaaggaacctatcatacaagtgaacaagaagctggtc
cgcaaactcaaacctcaccaggtggaagctactcagttcatgtgggactgcttgtgtgag
accagcgaccgcatcaagaagaaggaagggtctggctgtatcttggctcattgcatgggc
ctgggtaaaacattatcggtgatatcgtttgtacacacaatgctgtccaacgagaagtgc
acatccatgcgaacatgtctgattgtgtgtcctctgaacacagtcatcaactggagcaat
gaatgggtcatgtggttcgatgagaaggaccaattagacgtgtatgagatatcgagcgtg
aaacagaactggcctcgcgctgactacctgaaggactggcatgaaggagggggcatcatg
atcatgggctatgaaatgtatcgcaaccttactcagagtgctcgcatcaagaataagaag
ttgaaagccattttcctgaaaacgcttgttgatccaggtcctgaccttgttgtctgtgat
gagggtcatatcctgaagaatgattcatcgtcaatatcacaggcgctgaacaaagtccgc
accaggcggcgggttgtacttacaggaacacctttgcagaataatctcctggaatatcac
tgcatggccagttttgtgaagccaaacctgatgggtacaagaaaagagtttctcaacaga
tttgtcaacccaatcacaaatggtcagcactcagactcgacagcctttgacgtgaaagtg
atgggacgtcgagctcatgtcctgcacgagatgcttgctgggtgtattcagagacgagat
tattctgcccttaccaagttcctgccacccaagtttgagtatgtgatatcagtacgcctg
tctcctgtccagatagatttgtatgagaaataccttgaattggcgggcatcggtgtagat
ggaggacctaccactaataatagaggtgcgcgactcttctctgactaccagaacctcatg
aagatctggacacatccctgggtgctgaagctggccgagatccgagctgataacaggatg
aagtatgatgatagtgaagactccttcatcgacaacagcacggatgaggagatggcgtct
atgactgacaacagtgaggacagtgtcatgaacgtcagtaagagtgactcgggggagagt
gtggaggcagggcccagcaacaggggctctcggcgctctcggcgggggaaaccacctcca
gaagacagtgacaaggaggaagtggtcaaagactggaagacacggtcgagaggtggagag
gatgatgggatcgagatagacgatgggccaaagccagtgagtagtgagtggtgggctgag
tatgtgaaagaagaggaccaaagcaatttggatctcagtggcaagctcctgctcctcttc
gagatcctccgcatgtgtgaagagatcggagacaaagtgcttgtgttcagccaaagtctg
ttgtcactggacatcattgaatacttcctggatttcatcgacaagaaagcagaggaggca
gccatgcagaaggaagaggagagactaaagaaagagaaagaaaaagaggagaaagaaaaa
gaagagaaagggaaagaaaaggatgggaaggaaaaggaagggaaagaccaaaatggtgaa
gccaaagatggagagaagaaagaggatggagagaagaaagaagatggagagaaggaggat
gaaagtgaagagtttgtccagaccgtgttcgggaagagttggactaagggggcggactat
tttcgaatggatgggtctacaagtccacagctccgcagtcaatggtcggatcatttcaat
gatccggaaaacttcagatctcgcttgtttctgatctcaaccaaggcaggaagtcttggt
attaacctggttgcagcaaaccgtgtcatcatctttgacgcttcgtggaacccgtcgcat
gacattcagtccatcttcagggtgtacagatttggacagactaaaccctgctatgtctac
agattcttggctcagggtactatggaagagaagatctatgaacgacaagtcacaaaacag
tccctctcccagcgagtcgtggacgaacatcagattgaccgacatttcacttcagctgac
ctcagcgaactttaccactttaaacctgaacgccttgatgatccaaatcagcccaaaact
atacacgccttgccgaaggatgtactcctggctgagctcctgaagcaggacaaacagatt
gtcaggttccacgagcatgactccctgctggagaaccgtgctgaccagacattgacggag
gaggagaagaaggcagcctgggaggagtatgacaacgagaggaagggcatgaccaacagg
gtggcccaggccagcacagcgtctggtgtgggaatgttcagcccggacaatgtcctgcag
atcgtacagatggtcaagatgaggttccccaacctgccgcccgacctgttccaggcccag
gtccaggccatcttacagcagcagatcctctaccagcagtccatgcagaaccagcagatt
gaacagcagcggctgatggagatgcatcgactacaacggattcagaatgacattcgcagc
caacagcgtcagatccaagtcttgaaccgcaacagactagcctatccccgtggaggtggt
gcaatggggcctaggatggggatgtcatcaggcacacagcctcggatacccaaccaggcc
ggagcgctacgcagcattctcacgacgccaagtggcagcaccggaaagaaagatgcctcc
cactcacgcagtaccaccccaaacaaccctccggtagtgatagacctgtccaaatcttga
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