Haliotis rufescens (red abalone): 124139822
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Entry
124139822 CDS
T07893
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124139822
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrf01009
]
124139822
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrf04515
]
124139822
Protein phosphatases and associated proteins [BR:
hrf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124139822
Cell adhesion molecules [BR:
hrf04515
]
Cadherins
Protocadherins
124139822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
124139822
NCBI-ProteinID:
XP_046363131
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MDASRLRLVVLVVFSVIVFVAGQDAEYSIPEEVRVGEVIGDIPRDTNLNVNPDDQLQFSI
LTEGNQHSELFLINTAGILSVKTRINRETLCPFQVTCDIQIEIIARSTVSDIFRNLKIEI
TVKDINDNAPKFPVQSRNIEIPESSTVGSSFSLPGASDNDTDPNNSLQSVEIVPSNVPFR
VEFTKNLDGTSVVLIIVTEKLDRETQNTYSVKLIAEDGGAPPLSSSMDVQISITDVNDNS
PVFSHSIYNVTIKENTNLEMVILQVTATDNDEGENGNVFYRLSSHQADEIHRYFAMDVIS
GNMVLKQQLNSGHVKVIIEASDQGTPPKISQAFVEVEILDTINNPPAVTINILSETGNAK
VKESVRIGFPVAHIKIHDPDTGANGIVTCFSQTAGFDLQPLDDKEYKAVVAKLLDYETTK
HYKVTIFCRDAGSPTLNASAEFGVDVLDANDNSPEFMQNEIVLNIAENNAVGDMIVQLGA
TDKDSGINKKLTFSVLKEASINFTVDSNIPIVRTKIRFDREDTVQYRFHVLAIDGGVPSR
TATATITVNVLDINDEQPLFLETEYRFHMSENLPLGMGVGNVSAFDRDTEDGGIYTLKLS
PLLSTDHLPFTILQNGTILTTEELDREVKSEYIFRAVATDHGTMPLSGAAQVTVVVDDVN
DNDPSFVFPNDDNYSVSVFIPSKSGSVVVRIQATDIDDESNAQIKYTTRDLNSSGLFEMN
NTSGEIYTTKDIDTNMIGTFYLAIMISNTNPDAKSVSQRLKILISHRTEPGHLLPSSDQY
IVTVIVLVCSTLFIAAAILVALCYLRKRDKDQQLKEHCQQEPLSYSIQSSVSTVDGVTAA
DKATTGHQSIHKSDKKADLDTSSSTVNGKIISTGKLVSSSHDAPANTTYSTSVEHVVPDR
EHQRQNQLMSFRLHQALQRLNSETSTLDQNKIMAANAKVIEWRDAQKRADDFHSTSSGEI
TTGDSGHGSDEDSHILSDRSTSPQKIRLGIGAIKHQSHPGHNAPPRSKVSPIKGTKMAVR
GRNGQVHYPSHFNLTSKKDNVVPSGYNPYALQTSPRSEEDGDDTTTSGSYSITLDDTKSE
MPDFDYMPVKDVYV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagtagattaagacttgtagttttggtggtgttttctgtgattgtttttgtg
gctggccaggatgcagaatattcaataccagaagaagtgagagttggcgaggtgatcgga
gacatcccccgcgacaccaacctgaacgtgaatccagatgatcagctacagttcagtatc
ctcactgaaggcaatcagcacagtgaactcttcctcatcaacactgcaggcattctctca
gttaagacaagaattaacagagaaacactctgcccattccaggtaacttgtgatattcaa
attgaaattatagccaggtcaacagtgtcagatatttttcgcaatttgaaaatagagatc
acagtgaaagatattaatgataatgcaccaaagtttccagtccagtctcggaatatagaa
attcctgaatcatcaactgtcggatcttctttttctctccctggtgcctcagacaatgac
actgatcccaataactccttacagagtgtggaaattgttccaagcaatgtgccattccgg
gtagaattcaccaagaatcttgatgggacatccgtggtcctgatcattgtgacagagaaa
ttagatcgtgagactcagaatacgtacagcgtgaaactgatagctgaagatggaggagcg
ccacctctcagcagcagcatggatgttcagatcagcatcaccgatgttaatgacaattct
cctgtgttcagccattccatatacaatgtcaccatcaaggaaaacaccaatttagaaatg
gtcattctacaagtgacagccactgataatgatgaaggtgaaaatggcaatgttttttac
agactgagttcacatcaagctgatgaaatacatcgttattttgcaatggatgtcatcagt
ggaaacatggttctaaagcaacaactaaatagtggtcatgtcaaggtcatcattgaagcc
agtgatcaaggcacaccaccaaaaatatcacaagctttcgtagaggttgaaatactcgac
acaataaacaacccaccagctgtaactatcaatattctttctgagactgggaatgcaaaa
gtcaaagaatctgtacgcattggtttcccagtggctcacataaagattcatgaccctgac
actggtgctaatggcatagttacatgtttcagtcaaacagcaggctttgatctgcagcct
cttgacgacaaggaatacaaggctgttgtagccaaactactggactatgaaacaactaaa
cattataaagtgacaattttctgccgagatgccggtagtcctacacttaatgcctcggca
gagtttggggtggatgttttagacgctaacgacaattcccctgagttcatgcagaatgag
atcgtactgaacattgctgaaaacaatgcagtgggtgacatgattgtccaacttggtgct
acagacaaggattcaggtatcaacaaaaaattaacattttctgtgttgaaagaggcaagc
attaatttcactgttgactccaatatccccatcgtccgaacaaagatcagatttgacaga
gaagacactgtacagtataggttccatgttctggccattgatggcggtgtgccttcaaga
acagccacagcaaccatcaccgtcaatgtcctggacatcaacgatgagcagcctcttttc
ctggagactgagtacaggttccacatgtccgagaaccttcccttgggtatgggagtgggg
aacgtgtctgccttcgatcgggacacagaagatgggggcatatatacccttaaactctca
ccgctcttgtcaactgatcatctgccatttaccattctccagaacggaactattctgaca
acagaggagctggacagggaggtgaagagtgagtacatcttcagggcagttgctacggac
catggaaccatgccactgtcaggggcagcccaggtcactgttgttgttgatgatgtgaat
gacaatgacccatcatttgtgttcccaaacgatgacaactacagcgtgagtgtattcata
ccctctaaatcaggcagtgttgtggtaaggatacaagctactgacattgatgatgaaagt
aatgcccaaatcaaatacacaaccagagatttgaattcatccggcttgtttgaaatgaac
aacacctcgggtgaaatctacactactaaggacattgacacaaacatgattggcacattc
tacctggcaattatgatttctaatacaaacccagatgccaaatctgtctcacagagactg
aagatattaatatcccatcgcacagagccaggacatttgttgccatctagtgaccagtac
atcgtcaccgtcattgtcctggtgtgttctaccttgttcattgcggcagctattcttgtg
gctttatgttatctacgcaagcgggacaaggatcaacagctgaaggagcactgtcaacag
gaaccattgagttacagtatacagagctcggtcagcactgttgatggagtgaccgctgct
gacaaggccaccaccggacatcagagcatccacaagtctgacaagaaagccgatcttgac
acatcttccagcactgtcaatggaaaaattatttctactgggaaactggtgtcctcctcc
catgacgccccagccaacaccacatacagcaccagtgtagaacatgttgtaccagaccgg
gaacaccagcgccagaaccaactcatgtccttccgcctacaccaggcgctgcagagactg
aacagtgaaaccagcaccctcgaccaaaacaagatcatggcggctaatgcaaaggtcatc
gaatggagagatgcccagaagcgagctgatgacttccacagtaccagttcgggtgaaata
actacaggtgacagtggccatgggagtgacgaagactcccacatcctctccgacagatcc
acatcaccacagaaaatacgccttggtattggtgccataaaacaccagtcacatccaggg
cacaatgcccctccaaggtcaaaggtgtcgcccattaaaggaacgaagatggcagttagg
ggtagaaatggtcaagtgcattatccgtcacatttcaatttgacgtcgaagaaagacaat
gttgtaccaagtggttacaatccgtatgcattacagacttcccctcggagtgaggaggat
ggtgatgacacaacaacatccggcagttacagcatcacactggacgataccaagtccgag
atgccagattttgattatatgccagtcaaagatgtgtatgtgtga
DBGET
integrated database retrieval system