Haliotis rufescens (red abalone): 124141041
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Entry
124141041 CDS
T07893
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04140
Autophagy - animal
hrf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124141041
04148 Efferocytosis
124141041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrf04131
]
124141041
Membrane trafficking [BR:
hrf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124141041
Hops complex
124141041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_Vps41
zf-rbx1
ACBP4_C
zf-RING_16
zf-C3HC4_2
zf-RING_11
zf-RING_2
zf-ANAPC11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124141041
NCBI-ProteinID:
XP_046364864
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MASILDQYEEESARQASGIRQSPAQSLQEPIGVGFIDARLETESPIFNKKKVNFKPPDII
THLDVCNNFLVMVMSSNIMLRLDLEHPDNPDEVEIPRAVDDKVHKIFLDPTGKHLIISMK
CGDNYYLSRNSKKPKPIAKLKGHLIDSVGWNWQNANEATTSAILLGTSKGIIFETELTAN
EDSRFFQGSLDQYLRQLKLATKPHEMFNLGREKAQSVTSLQFDRLPSTTMTEYRYYILAT
TPGRLYQFIGTVSTSAEPPMFMSLFQQYETGVETVQFLELPGDFGYSELHLFFPKFRQAA
TKFAWMTGPGIYYGDIDVTGAAGPNSVLSNAKLMPYPKEVDEKPAPPISMLLTEFHVLIL
YPDRLKAVCVLNEQLIYDDVYVERFGRLLGCCKDPIRGQVWTYTTTSVFKYKIVKEARDV
WQMYLDKGQFELAREYCKDNPSQLDKVLTKQAEYLFENRKYEASAAMYAETQNSFEEIAL
KFIRLPQKEALKTFVQKKLSALRPSDKTQMTMLVTWLIELYLNQLGELKEQGMDDSEDYM
RIQEQFRKFLGQTRVKETASNNRGVVYDLIASHGDVEDMVFFAVLMKDYERVISHHIQHE
NYKGALDVLKKQSEVELYYKFSPLLMQYTPKETVDAWMTQHKYLDPKQLIPALVQYDHHK
YREQGNEAIRYLEFCVHKLGNKDSPIHNYLLSLYAKLQSDQLMTYLNLQGEDVDDVSYDL
KYALRLCSEYGHKRACVHVYSLMGLYEEAVDMALSVDVELAKTQADKPDEDDIELRKKLW
LRIARHVVEEEKDIKRAMDFLHECDLLKIEDILPFFPDFVTIDHFKDAIITSLHEYNDHI
KSLKDEMEEATQSAEEIRKEIQSFRNKYAFVKAEDKCSSCSYPLMVRAFYLFPCQHKFHM
DCLIADVLPSLSGSKKSKVDQLQRKLAERDEAVPYRKSTSAAQIGVNRDAEVKAELDDLV
ASECIYCGDFMIRCIDKPFIEDDEWKSAEVEWE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaatattggaccaatatgaggaagagtcagctcgacaagcttctggaatcagg
cagtcacctgcacagagtctacaagaaccgatcggtgttggtttcattgatgcccgtcta
gaaacagaatcaccaattttcaacaagaaaaaggtcaactttaagccgccagacatcatc
acccatctggacgtgtgcaacaacttcctggtgatggtgatgagctccaacatcatgctg
cggctggacctggagcaccctgacaaccctgacgaggtagagatcccacgtgccgtggat
gacaaggttcacaagatcttcctggaccccacggggaagcacctgatcatcagcatgaag
tgtggggacaactactacctctccaggaactccaagaaaccaaaacctattgccaaactc
aagggtcacctgatcgactctgtggggtggaactggcagaatgctaacgaggcaaccacc
agcgctatactgctaggcacaagcaaaggcataatatttgagacagagctcacagccaat
gaggacagtcgtttcttccagggcagcctggaccagtacctgagacaattaaagcttgca
acgaaacctcacgagatgttcaacttgggcagagagaaggctcagtcagtgacaagtctt
cagtttgaccgtcttccgtcgactacgatgacggaataccgctactacattcttgccact
actccaggtcgtctgtaccagtttatcgggacggtgtccacatctgctgagcctccgatg
ttcatgtccctcttccaacagtatgagacaggcgtggaaacagtgcagtttcttgagtta
ccaggggactttggttacagtgagctacatctgttcttccccaagttccgccaggcagct
acaaagtttgcctggatgacaggacctggtatttactatggagatatcgatgtcacggga
gcagcaggacctaactcagttttgtccaatgctaaactcatgccctacccgaaggaggtg
gacgagaagccagcaccccccatatcaatgctgctcacggaattccatgtactcatcctc
tacccagacagattaaaagctgtgtgtgtgctgaacgagcaacttatttatgatgatgta
tatgtggagaggtttggtaggctgctgggctgctgcaaggatccaatccgtggtcaggtc
tggacctatacaaccaccagtgtgttcaagtacaagatcgtgaaggaggcacgggatgta
tggcagatgtacctggacaaggggcagttcgaactggccagggaatactgcaaggataac
ccatctcagttggacaaggtgttaaccaagcaggccgagtacctcttcgaaaacagaaaa
tatgaagctagtgctgccatgtatgcagaaacacagaattcatttgaagagatcgctctc
aagtttatccgacttccacagaaagaagccctcaaaacttttgtacagaaaaaactatct
gctttacgaccaagtgacaagacacagatgacgatgctggtgacgtggctgatcgagctg
tacctcaaccagctaggggagctgaaggagcagggcatggacgactccgaggactacatg
cgcatccaggaacagttccgaaagttcctcggacagaccagggtcaaggagacagcctcc
aacaaccgtggggttgtctacgacctgatcgctagtcatggtgatgtggaggacatggtg
ttctttgctgtattaatgaaagactacgagagagtcatcagccatcacatccagcatgag
aactacaaaggtgctctggacgtgttgaagaaacagagtgaggttgagctgtactacaag
ttctctcccctgctgatgcagtatacgccaaaggaaacagtggatgcctggatgacccaa
cacaagtaccttgaccccaaacagcttatccccgctctggtgcagtacgaccatcacaaa
tacagggaacagggtaatgaagctatccggtacctggagttctgtgtgcacaagctgggc
aacaaggacagccccatacacaactaccttctgtccctgtacgccaagctgcagtcagac
caactcatgacctacctcaacctgcaaggggaggatgttgatgatgtgagttacgacctg
aagtatgcactgcgcctttgttccgagtatggccacaagagggcgtgtgtgcatgtgtac
tcactcatgggattgtacgaggaggcagtagacatggcactctctgttgatgttgagctg
gcaaagacgcaggcagacaaacctgacgaggatgacatagaactgaggaagaagctctgg
ctgcggatagctcgacatgttgtggaggaagagaaggacatcaaacgtgccatggacttc
ctacacgaatgtgacctcctcaagattgaggacatcttgccattctttcccgactttgtc
accattgaccattttaaggatgccatcatcacatcactgcacgagtacaacgaccacatc
aagtcactgaaggacgagatggaggaggctacccagagtgctgaggagatcaggaaggaa
atccagagcttcagaaacaaatatgcctttgtgaaagccgaagacaagtgttcctcttgc
agctacccactgatggtgagggcgttctacctgttcccatgccagcacaagttccacatg
gactgtctgattgcagatgtgctgcccagtttgtcggggtccaagaagtccaaggttgac
cagttacagaggaagctcgcggagagggacgaggcggttccatacaggaagtccacatca
gcagcacagatcggggtcaatagagatgcggaggtgaaggcggagttggacgacttggtg
gcttcggagtgcatatattgcggagacttcatgatcaggtgtatcgataagccctttatt
gaagatgatgaatggaagtcagctgaagtggaatgggagtaa
DBGET
integrated database retrieval system
