Haliotis rufescens (red abalone): 124141354
Help
Entry
124141354 CDS
T07893
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124141354
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
124141354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_12
Motif
Other DBs
NCBI-GeneID:
124141354
NCBI-ProteinID:
XP_046365299
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
MSKPRRRVTVDTGKPVSEESEKRKPSVFERLGPGGGQRKYEERGEKSKSQSQSLYLDKCR
HWLLTGNCPFGAKCKFQHGPFIAKRPTKNRSDDDGAEDLRLKVKGSTERHHPEGSVSPES
RSGSRSRHDKETKIKSTVVVKNTTGGDSGDEDSENSDNWDAEVLDYKKELELEKKRQEIQ
RALSQLAASEGEERENITIEKKVPSKEKIARESVSFTLKKNRPQPTKPFSSDYSDSDSSP
ERTKAFPEKSPKKTSPPSKKKGDKKKHKQKSPFGKAKGPLRTPSPSEMGKHKEHKKKYDT
EDDSPHKTKHKKMKKMDKKLDRSPEPDLPKSKKKHSPRIDKFHTEKPSKADKRLLSPDLG
SPTGKRSHRSWSPTSRSRSRSITPIPPKKQKNISPGLVKEKVKGEKVKQKKKKGKGKLGG
DGSAARERHISPVRIKKKKIKAELPFPIKRDIEEDLPARHSDSPGSENMPPRSVSPGSPR
RKEPLEREFFKGMLHDREEEKRETGSRKNKRKRSETPPQRERIPPSRSDLGDKRKGGQSQ
ERKFSRKEQYNADIDRPKHSDERGRRASPDSFRSEDRSPTPTPPSRRNHSPDGSQRSRSR
RGRDEDIDVNRSRDRRSPDERRMGKESRDRREDLDPRGQSRENYRERYEHGEEHRRDPRE
RFDEGFPEFSDRYQDRSRFQEDREQFDPRERHRHEQSFERGRENRRERYEGRDRLVADQG
RMHPGQGRDYFGDRHQQGMHGMGRGAGRGRGAYEGGMRERSYAPDRQEQMRGYTAEFADR
QSRRSEWEDRRRGEVFGQGREWGERHDMSHEERFDMRRDDHRFDERYFRRDDERQIGRDG
RPLSRSIDRNMRDGWRDRPDMREDRVGLRDERMRENRMDDRRRERHSPSPFDKRGYRDDR
FPHDERLFGREDDDRMREERIPMERGRDDRIREDRGPGERDRDVRGGMDRGRDDRGMMER
DRGPMDRGRDGSVDERGRGNRGRDDRGREDRMGMDRGREERGPLDRMKEDRGSLDRGEDR
GFMDERRRERGFREDRKGERGPRDERGFREEEDRFRDDRGFREDNRGGKFERDFREERVG
RDERHRDEREFRGSRGDPSPEDDRTPDQRTREEKEDQEKASRDGSHERPRSSSSKSERTK
DKISKDDRNSDKSSKDSRMSKDEKSSKDDRSKERGERRKREDRSPRRDGKKEEKGKWPPP
EGEEQDSEAESGEDLKQEETRSRDSRKRGPDKEELPLSPIPKRLREVSPASSSRSRGSHN
SRRLPDRDQQRSRRRGDSGSDREDKSGRKGSVDRDKKSRKKDTTSIDAPSKSEKSRSISP
KPSKEKNEDKADKGKARRRSLSGSSSKSKEGVAPPEAEEKKPQPPPAAPRKADDNLYDED
NISAIVSLGGKSSLADDDRASDHASIRSVQFSDWSEDDMADNILNQAEVEIEREERRQRS
PSRSSLGSRGSALDRKIHVSQDHMLEVIKERVHGESGSMVSCEGEEGGPGVGQDKDRQFE
DEMDALPEYEQISSDEDGFMEDDGEVQSSIVNILDIDWSSLKDAAKPKPKGSALQRFSPA
SIFSQIGVSRAYAGDELFEKIKTVCQKQLDESEKTENDGADGNKEKTSQKFVLHDSVAAF
HCAALRKLRERASLLKNIGSHRRALCARKDLEIRRRLCKVDKVFDQSPVYPSHVMDTDLS
KLSVQLFRQGRDITPDKKGPEAETQAEVSCPT
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccaggaggagggtgacagttgataccgggaagcctgtctcagaggaatca
gaaaagaggaagcccagcgtctttgaaagactgggaccaggtggtggacagagaaaatat
gaggagagaggtgaaaagtctaagagccagagtcaaagtttataccttgataagtgtcga
cactggctactcacaggaaattgtccatttggtgccaagtgcaagtttcagcatggtccc
tttatagccaagagaccaacaaagaatcgtagcgacgacgacggagcagaagatttgcga
ctaaaagttaaaggcagcacagaaagacatcacccagagggttccgtgtcacctgaatcc
aggtcagggtcaaggtcacggcacgataaagaaaccaaaatcaaatctacggttgttgtt
aaaaatacaactggtggagatagcggagacgaggattctgaaaactccgacaactgggac
gctgaagtattagattacaagaaagaactggaacttgaaaagaaacgtcaagagattcag
cgagcactgagccagttagcagcatccgagggagaagagagggaaaatatcaccatcgaa
aagaaggtgccctccaaagagaaaatagccagggaatctgtgagttttacccttaagaag
aacagaccgcaacctacaaaaccattttccagtgactactcagattcagacagcagtcca
gagagaaccaaagcttttcccgagaagtccccaaagaagacatcccctccaagtaagaag
aaaggtgacaagaagaagcacaagcagaagtctccctttggtaaagctaaaggtccgctg
cggacacccagcccctctgagatgggcaaacacaaggaacataagaagaagtatgataca
gaggatgattcacctcacaagaccaagcacaagaagatgaagaagatggataaaaaactg
gacagatccccggaaccagatctgccaaagtccaagaaaaaacactcacctcggattgac
aaatttcatactgagaagccatcaaaggctgataaaagactgttgagcccagatttaggg
tcaccaactggcaaacggtcacataggtcatggtcaccaacatcaaggtcaaggtctaga
tccatcacccccattccaccaaagaagcagaagaacatttctccgggactggtaaaagag
aaggtcaaaggtgaaaaggtcaaacagaagaagaagaaaggcaagggtaaacttggcggt
gatgggtctgcagccagggaaaggcacatttcgccagtgagaataaagaaaaagaagata
aaggcggaattaccttttccgataaagagggacattgaggaggatctgccagcacgccac
tccgactctccggggtcagagaacatgcccccgaggtctgtgtccccgggatccccccgc
cggaaggagcccctggagagggagttcttcaaggggatgctgcatgacagggaggaggag
aagagggagacggggagcaggaagaacaagagaaagaggtccgagactccaccacagcgt
gaacgtattcctccaagtaggagtgaccttggggacaaaaggaaaggaggtcaaagtcag
gagagaaagttttctcgcaaggagcaatataatgccgatatcgaccgaccaaagcatagt
gatgagcgtgggagacgagcatcaccagattcattccgatctgaagacagatcacccaca
ccaacacctcccagtcgaagaaaccactctcccgatggatctcaaagatcaagatcaagg
agaggtcgtgatgaggacattgacgtgaatcgatccagggacaggcggtcacccgatgag
cgaagaatgggtaaagaatcacgtgacaggcgagaggaccttgaccctagaggtcaatcc
agagaaaattatcgggaaagatacgaacatggggaggaacatcgccgagatccaagggag
aggtttgatgaaggctttccggagttctctgatcggtaccaggatcggtccagattccag
gaggacagagaacagtttgatccaagagaacgacacagacatgaacaaagttttgagcga
gggagagaaaacaggcgggagaggtatgaaggaagggacagattggtggcagatcaaggc
agaatgcatccaggtcaaggaagggactattttggtgatcgccatcagcagggtatgcat
ggtatgggccgcggtgcaggcagagggcgtggcgcatatgaaggaggcatgcgagagaga
agctatgcaccagacagacaggagcagatgcgagggtacactgctgagtttgctgatcga
cagagtcgtcggtctgagtgggaggatcgtcgccgtggggaggtgtttgggcagggtcgt
gaatggggggaaagacatgacatgtcgcatgaggagaggttcgacatgaggagagatgac
cacagatttgatgagagatatttccgaagagatgatgagcgtcagattggtcgagatgga
agaccattgagccgatcaatagaccgaaacatgcgggatggctggagagacagacctgat
atgagggaagacagggttggattgagagatgaacgaatgagagagaacagaatggatgat
agacgtcgcgagagacatagtccatcaccctttgataaacgtggttaccgggacgatagg
ttcccccatgatgagaggctgtttggccgtgaggatgacgacagaatgagagaagagaga
atcccaatggagagaggacgagatgacaggatccgagaagacagaggacctggtgagagg
gacagagatgtgcgtggtgggatggacagaggacgagatgacaggggaatgatggagaga
gacagaggcccaatggacagagggagagatggttctgtggacgagagaggcagggggaac
cgcgggcgggatgacaggggacgcgaggataggatggggatggacagagggagggaggag
agaggtcctctggacaggatgaaagaggaccgtggctctttagacagaggggaggaccgg
ggattcatggatgaacggagacgtgaaagaggattcagggaggaccggaagggtgagaga
ggacctagagatgagagagggtttagggaggaggaggacagattcagagatgatagagga
ttcagagaggacaacagaggaggtaaatttgagagagacttcagggaggagagagtaggg
agagatgagagacacagagatgagagagagttccgtggatctcgtggagacccgagccct
gaggatgatagaacgccagatcaaaggaccagagaggagaaggaagatcaggagaaggca
tcacgagatggaagtcatgagaggccgaggagctcaagctccaaatcagaacggactaag
gataaaatctccaaagatgatagaaatagtgataaaagttcaaaagactctagaatgtct
aaagatgaaaagagctccaaagatgatcgctctaaggagaggggagaacggaggaagagg
gaagatcggtcccccagaagggatgggaagaaggaggagaaggggaagtggccgccgcca
gagggggaagaacaggacagtgaggcggagagcggggaagacttgaagcaggaggaaact
cgaagtagagactccaggaaacgaggccctgacaaggaggaactgccactatctcctatc
cccaagcgtctgcgtgaggtctctccagctagttcatctcgcagccgaggcagtcacaac
agcaggcgtcttccggaccgagatcaacagcgttcccgtcgccgtggtgacagtggatct
gacagggaggacaagtctggcaggaagggaagtgttgaccgggacaaaaagtcacggaaa
aaggacactacatctattgatgctccaagcaagtccgaaaaaagtcgtagcattagtccc
aaacctagcaaggagaagaatgaagacaaagcagacaaggggaaggccagaaggaggtcg
ttgtcggggtcgagttccaaatctaaagaaggagtagcgcctcccgaggctgaggagaag
aagccacagccacctcctgctgctcctcggaaagctgatgacaacttgtatgatgaagac
aacatttctgcaattgtctcccttggagggaagtcttcccttgcagatgatgacagagcg
tcggaccatgcgagtatccggtcggtgcagttcagcgactggtcggaggacgacatggcg
gacaacatcctgaaccaggctgaggtagagatcgagagggaggagcgccgccagagaagt
cccagtcgaagcagtcttggcagtcggggaagtgcccttgacaggaagatacatgtcagc
caggatcacatgttggaagtcatcaaagaaagagtgcatggggagtccggcagcatggtg
tcctgcgagggagaggagggtggaccgggcgtcgggcaggacaaggacaggcagtttgag
gatgagatggatgccctgcccgagtatgagcagatctcttcagatgaagatggcttcatg
gaagatgacggtgaagtacaatcaagtattgtaaacatcctggacatcgactggtccagc
ctcaaggatgcagccaagcccaaacccaagggttctgctctccagcggttcagccctgcc
agtatattcagccagattggggtctcacgggcctatgctggggatgaactgtttgagaag
atcaagactgtgtgtcagaaacagctggacgagtcagagaagacagaaaatgatggagcc
gatggtaacaaggagaaaacatcccagaagtttgttctacatgactcagtagcagccttc
cattgtgcggctctgcgtaaactccgggagcgagccagtctcctgaagaacattggctcc
catcgcagagcactatgtgcacgcaaagacctggagatccggaggagactttgtaaagtt
gataaggtgtttgaccagagtccagtgtaccccagccatgtgatggacaccgatctatcc
aagctgagtgtccagctgttccgccagggccgagacatcacgccggacaagaaggggcct
gaagcagagacacaagcagaggtgtcatgtccaacatag
DBGET
integrated database retrieval system
