KEGG   Haliotis rufescens (red abalone): 124141989
Entry
124141989         CDS       T07893                                 
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
hrf  Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hrf03400]
    124141989
DNA repair and recombination proteins [BR:hrf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     124141989
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     124141989
SSDB
Motif
Pfam: zf-CCHH FHA_2 FHA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 124141989
NCBI-ProteinID: XP_046366166
LinkDB
Position
Unknown
AA seq 618 aa
MSGIYLQSTEGGEVIEVPLAKTVIGRGPFLQITDKRVSRSHAELQVTDKSLYITPTHTNP
CFLRRGGGDTQVALSKDEKCKLAIGDVFGLLPEQLFFTVCGKQGAINGTSIKEESLSQSD
SKVKSEPKSLDRTVKDEDPDDFLDDVGRDLEDSPTPRKKTKNKDSGPAVVKVRGKLKMAL
PLDKQRTLPDWMIKMAAVGPVPEKKKKKPTAKIPAVAKRGAESSTPASPRKRAAPRRTYV
DDYDDEEEEEPQPVQRNQKRKRKTLSEEEEEEEERKPRRRARPSRRAAAYDDDDDDDFSP
RKRPQRAARESRGSYVDDFIPDDDSDASLPDHLKRVKDDDSDFEIDDGGGGDSGSDWESK
GKGKRGKSKGKALATPRRASGRRGRPRKVRDDDEEDDDEEDDDEAYVPRPSKRRGTAPKR
KKMESEEEEEEEEKTPSKKRGVVTKKRLRCPYGKKCYRKNPAHFKDVCHPGDTSYDEASE
EEGDDDENVDNDDDKPECEFGTDCYRKNADHLKKYSHKKKPDDQPKRKPAKKDGKTSVLA
KDDDDNGEPNTYDYNDSFIDDIGQSYASESSCGDPEEEDSDYDPEEEDVRSLMKEAKGFV
KKKKMRQPVGKKIEIKAE
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgtcgggcatatatctgcaatcgacggaaggtggggaagtaattgaagtacctttggca
aaaactgtcatcggtagaggcccatttcttcagattactgacaagagggtttcccggagc
catgctgaactgcaagttactgacaagagtttatacataactccaactcatactaaccca
tgtttcctgcgacggggagggggagatacccaagtagcgttgtctaaggacgagaagtgt
aagctggctattggcgatgtctttggactgcttcctgaacaactgtttttcactgtgtgt
ggaaaacagggggctattaatggtacaagtatcaaagaagaatcactgagtcaatcagat
tccaaagtcaaatctgaaccaaagtcattggacagaacagtgaaagatgaagaccctgat
gacttcctggatgatgttggcagagatttggaggactcaccaacaccaaggaaaaaaact
aagaacaaggacagtggccctgcggttgtgaaggttcggggcaagctgaagatggcgttg
cctctagacaagcagcgtacactgccagactggatgatcaagatggctgccgtaggtcca
gtgccagagaagaagaagaagaagcctactgctaagataccagctgtagccaagagggga
gctgagagttccactccagcctctccacgtaagcgagctgccccaaggcgaacgtatgtt
gatgactatgatgacgaggaggaagaggaaccccagcctgtacagaggaaccagaagaga
aagaggaaaacattgtctgaggaggaagaggaggaggaagaaagaaaaccacggcgacgt
gcacgaccatcacgtagggcagctgcgtatgatgatgacgatgatgatgacttttcacca
cgaaaacgaccccagcgggcagcacgagagtcaagaggcagctatgttgacgactttatc
cccgatgatgacagtgatgcttcgttaccagaccatctaaagcgggtgaaggatgacgac
agtgactttgagattgacgacggtggaggcggagattccggcagtgactgggagagtaag
ggcaagggaaagagaggaaagtcaaaaggcaaagctcttgccacgccaagaagggcgtca
ggcagacgtggtcgacctcgcaaggtcagggatgatgacgaggaagatgatgacgaggaa
gatgatgacgaggcgtatgttccccggccatccaaacggagaggcactgcacccaagagg
aagaagatggaaagtgaggaggaggaagaggaggaagaaaaaactccttctaagaagagg
ggagtggtcacaaagaagaggctcagatgtccgtatgggaagaagtgttacagaaaaaat
cctgcccacttcaaagatgtttgtcatcctggtgacacctcatatgacgaagcatctgag
gaagagggtgatgatgatgaaaacgttgataatgacgatgataaaccagaatgtgaattt
ggaactgattgctacaggaaaaatgccgaccatttaaagaaatattctcataaaaagaaa
ccagatgatcagcccaagagaaaaccagcaaaaaaggatggtaaaacaagcgtgcttgct
aaagatgacgacgacaacggagaaccgaacacatatgactacaatgacagttttatcgat
gacattgggcagtcttatgcgagcgaatcttcatgcggagatccagaggaggaagactcg
gactatgacccagaggaagaggatgtgagatctttgatgaaggaagccaaaggatttgtt
aagaagaagaaaatgcggcaacccgttggaaagaaaatagaaataaaggctgagtga

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