Haliotis rufescens (red abalone): 124142301
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Entry
124142301 CDS
T07893
Name
(RefSeq) scaffold attachment factor B1-like isoform X1
KO
K25092
scaffold attachment factor B
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124142301
Spliceosome [BR:
hrf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124142301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
124142301
NCBI-ProteinID:
XP_046366656
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MAVQGDKKLSELRVVDLRQELETRGLDKAGVKAVLHERLAKALEDEGHDPDEYTFAVSDA
TPKKAEEKKSTRLKEKPKGEEGEEEDDEEEFFEEDIEGEPDESEDILDDVILDLGEDAEA
EEMGTGEEDAFEVDVSEVDEEEAPQDDEEMEMDVGEEDGLVDLGEELEGDGEMPAEGGEE
DADPEEDAYPEEDAEMETEIIDETEPEEPETVEELTEVVTVPEVTPVPVPTPTKSTSPVK
TKAATPAAKSTPAPKAAAAKTAPKVTPPKTAPAKIAPAKTAPVKTPVKQAAAKSPAAKPA
ATPKSAAAAAAAAPPAPTSTPAKTTTPAKTQAAQKAPVKTATRSSSPRVAAAAKAASTAP
GKTAETPPAAAATTATKTVTAKTVTAKTVTVKTATAKTATAKTATVKTATAKKDVPKDQV
TLFEPTDDSFDVSVDDTQVNEIDADLKDDKGEEKPVGADATATSEEDKGGDCETIKVKTE
EKSMIAEEDIKKEKKEDAKPAKSSEGKDSKEKDTKGSQHSRNLWVSGLSSSTRATDLKSL
FSKYGKVIGAKVVTNARSPGSRCYGFVTMSSAEEASKCIQHLHRTELHGKMISVEKAKNE
PGGPSKAALAQKPEDKKPSDKKEGEKKDGEKKVEKKDDRKPVTRDNRSNRRPAGRSPRHD
DRVRRDARHPEKKQDDKRSTDTKRASTTSPKSAEKQKPEEKTEGEVKKEEDGEKEEKKSE
SGKSQSKNSKDYILSFEEIKTEREKERLRIKENALRGEEQRRLSELERQRSRQKQIHMRQ
REEAMRLEREKLKLRQERERLERDRMETERLLLERERLERQRIEQLRLEQRRLEEQVRAA
KRPFEKLASRHDDDYWSGPIKRPTSDRYDNYGDSRRDNRFDRSDNGDRKVERYDRRDNRN
TDTRGSNRGRMEDRNDRREDRRGDSFADTQRNTRDDRRDTRTHSRQEDNRRDFNRSRDDD
RRTARSPQRHDSRNDWKSDRDTRLVVASGRDTWQGQSGSGVQDDRRGKSYNSGSGMMSNG
ANSNQRQVWGNNSDRSKIDPSWGHGVMDNSATRGGGGSGGGSGGGDRWMGGVTGTHSDRG
GGGGFNMGGSGGLINNMGGTGLYMAAAPQNTNLMMMGGITRQPEARYLQQGTVRRF
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacaaggcgacaagaagctctctgagttgcgtgttgttgatttacgtcaggaa
ttagagacacgtggtttagacaaggctggtgtgaaagctgtattacacgaaaggcttgca
aaggcactagaggacgaagggcatgacccagatgagtacacatttgcagtctcggatgct
acacccaaaaaggcagaagaaaagaaaagtactcgattaaaagaaaaaccaaagggagag
gaaggagaggaagaggatgatgaagaagaattttttgaagaggacattgagggtgaaccg
gatgaaagtgaggacattctggatgatgttatcctggaccttggcgaggatgctgaagca
gaggaaatgggtaccggtgaagaggatgcgtttgaggttgatgtttcagaggttgatgaa
gaggaagcccctcaagatgatgaagaaatggaaatggatgttggtgaggaggatggttta
gttgacttgggtgaggaacttgaaggggacggagagatgccagctgaaggtggcgaagaa
gatgctgaccctgaagaagacgcttatcctgaagaagacgctgagatggagacagagatt
atagacgagacggagccagaggaaccagagactgttgaggaactgactgaggttgtgact
gttcctgaagtcaccccagttcctgttcccacccctactaagtcgacttcaccagtaaag
accaaggctgccacgccagcagctaaatcaacacctgcgccaaaagcagctgctgcaaaa
actgctcccaaagttactcctcccaagacagcacctgccaagatagcacctgccaagaca
gcacctgtgaaaacacctgtgaaacaggcagctgcaaaatcccctgcagcaaagccagca
gccacacctaagagtgctgcagcagcagcagcagcagcaccaccagcaccaacatcaact
ccagccaaaactacgacccctgcaaagacacaggctgcacagaaagctccagtgaagact
gccacccgatcttcctcaccaagagtagcagcagcagcaaaggcagcatcaactgcacct
ggaaaaactgcagaaacgccaccagcagcagcagcaacaacagcaacaaagacagtaaca
gctaagacagtaacagctaagacagtaacagtgaagacagcaacagcaaagacagcaaca
gcaaagacggcaacagtcaagacagcaacagcaaagaaggatgttccaaaggatcaagtc
accctgtttgaaccaacagatgattcctttgatgtgagtgttgatgacactcaggtgaat
gagattgatgccgatctgaaggatgacaaaggagaagagaaacctgtcggagctgacgcc
acagcaacatctgaggaggacaagggaggtgactgcgagacgatcaaagtgaaaactgag
gaaaaaagcatgatagctgaagaggacataaaaaaagagaaaaaagaagatgcaaaacct
gccaagagctctgaaggcaaggacagcaaggagaaggacacgaagggcagccagcatagt
cgcaacctgtgggtgagtggcctgtcctcttctactagagctacggacctcaagtcactt
ttcagcaaatatggaaaggttattggagctaaggttgtgaccaatgctcgcagtccaggg
tcacgatgctatgggtttgtgacgatgtcatcagcggaagaggcctccaagtgcattcag
cacttacatcggaccgaactacacgggaagatgatatcggtggaaaaggcaaagaatgaa
ccaggtgggcccagtaaggcagctttagcacagaaacctgaagacaagaagccatctgac
aagaaggaaggggaaaagaaagatggggagaagaaagtggagaagaaagatgacaggaag
cctgtgacccgggataatcggtccaatagacgtccagccggaaggtctcctcgccatgac
gaccgcgttaggagagatgctagacacccagagaagaagcaggatgataaacgatcgaca
gatactaagagagcttcaacaacatcaccgaaatcagcagagaagcagaaacccgaagag
aagacagaaggagaggtgaagaaagaggaagatggagaaaaggaggagaagaaatctgaa
tcgggcaaatcccagtccaagaattctaaagattacatactttcatttgaagaaatcaag
actgagagggaaaaagaacgcctccgtataaaagaaaatgcccttcgtggtgaggagcaa
aggagactgtcggaacttgagagacaacgttcaagacaaaagcagattcatatgcgtcaa
cgagaagaagcaatgcgacttgaacgagagaaactgaaactgagacaagagcgggaaagg
cttgagcgagaccgcatggaaacagagagactactcctggaacgagaaagactggagagg
cagagaatcgaacaacttcgactggagcaacgcagactggaggagcaggtcagagcagca
aaaagaccatttgaaaaacttgccagtcgtcacgacgatgactactggagtggacccatt
aaacgacctacatctgatcgatacgataattatggtgattcgagacgagataatcgcttt
gaccggagtgacaatggcgacaggaaagtggagcgatatgataggcgtgataatcgtaat
actgatactcgtggttctaacagaggacgcatggaagaccgaaatgatcgtcgagaagac
agacgcggagacagctttgcagatactcagagaaacacaagagacgatagacgagatacg
cggacacattcccgtcaggaagataacagacgagacttcaacagaagtcgagatgatgac
cgacggaccgcgaggtcacctcagcggcatgattcccggaatgactggaaatcagataga
gacacacgcttggtggtggcgagtggacgggacacctggcagggtcaaagtggctctggg
gtgcaagatgacaggcgtggcaaaagttataattctggatcgggtatgatgtcaaacggt
gctaattcaaatcaacgtcaggtgtggggaaataacagcgaccgtagcaagatagacccg
tcatggggccatggtgttatggacaactctgcgactcggggaggcggcggcagtggcggt
ggcagcggcggcggcgaccgatggatgggcggagtcacgggtacacacagtgaccgagga
ggaggaggagggttcaacatgggggggagtgggggactgatcaacaacatggggggaaca
ggactgtacatggctgctgccccacaaaacacaaacctcatgatgatggggggcataaca
agacaaccagaggcccgctatttgcaacaaggaacggtgcgcagattctag
DBGET
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