KEGG   Haliotis rufescens (red abalone): 124143334
Entry
124143334         CDS       T07893                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
hrf  Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hrf03041]
    124143334
Spliceosome [BR:hrf03041]
 Complex B
  Other components
   Complex B specific factors
    124143334
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th LisH_TPL Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_VPS8 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_BBS7 PROPPIN Beta-prop_IP5PC_F LisH_WDR26 LisH_2 TolB_like DUF7165 VPS8_N Beta-prop_IFT122_2nd PA14
Other DBs
NCBI-GeneID: 124143334
NCBI-ProteinID: XP_048251234
LinkDB
Position
Unknown
AA seq 513 aa
MAVEIESADVVRLIEQYLKENNLLRTLSILQEESGISLNTVDSVDSFVSDINSGHWDTVL
QAIQTLKLPDNKLIELYEQIVLELIELRELGAARSLLRQTDPMIMLKHNQPDRYIHLENM
LSRSYFDPREAYPEGQTKEKRRNAIATALAGEVNVVPPSRLLALLGQALKWQQHQGLLPP
GTTIDVFRGKAAVKEQEEEKYPTQLSKTIKFGQKAHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLRYQAQDNFMMMDDAVLCMSFSRDSEMLATGAQDGKIKVWKILTGQCLR
KFEKAHNKGVTSITFARDNSQLLSASFDQTIRVHGLKSGKTLKEFRSHTSFVNDAVFTPD
GHHIISASSDGTVKVWNVKSTECQSTFKSLGGTTGTDITVHSVHPLPRNVEQFIVCNRSN
TVVIMNLQGQIVRSFSSGKREGGDFVCASLSPHGEWIYCVGEDMVLYCFSVTTGKLERTL
TVHEKDVIGICHHPHQNLISTYSEDGLLKMWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggcggtggaaatcgagtcagcagatgttgtgaggctcattgagcagtacctgaaagaa
aacaacctcctgagaaccctctccatattacaggaggagagtgggatctcactgaacaca
gtagactcggtggacagttttgtgagtgacattaacagcggtcactgggacaccgtgctg
caggctatacagacgctaaagctgcccgacaacaagctgatagagctgtatgaacagatt
gtcctggagctgattgagttgcgtgagctgggagctgcgaggtcgctgctccgtcagacc
gaccccatgatcatgttgaagcacaaccagccggacagatacatccatctggagaacatg
ctgtccaggtcctacttcgaccccagagaggcttatccagagggacaaacaaaagaaaag
cgacgtaatgccattgcaacagctctcgccggtgaggtgaacgtggtgccaccgtctcgt
ctcctggcgttgctgggtcaggccctcaagtggcagcagcaccagggtctcctgcctcca
ggaacaactattgatgtgttccgaggcaaggctgcagtcaaggaacaggaggaggagaaa
tatcccacacagctcagcaagacaatcaagtttggtcagaaggcccatgtggagtgtgca
agattttcccccgatggtcagtacctagtgactgggtctgtggacggctttatcgaggtg
tggaacttcaccaccggcaagatcaggaaggatttgagatatcaagcacaggataacttc
atgatgatggatgatgcagtgttgtgtatgagcttcagcagggactctgagatgctggct
acaggggcccaggatggaaagataaaggtgtggaagatcctgactggccagtgtctccgg
aagtttgagaaggcacacaacaaaggcgtgacctccatcaccttcgccagggacaacagc
cagctcctcagtgcttcctttgaccagaccatcagagtacatggtttgaaatcaggtaaa
acgctgaaggagtttaggagccacacatcatttgttaacgatgcagtgttcacacctgat
ggccatcatattatcagtgcaagttccgacggtacagtgaaagtgtggaatgtcaagtca
acagagtgccagagcacctttaagtcccttgggggtacaaccggtaccgacatcacagtg
cacagcgtccacccgctgcccagaaatgtggagcagtttattgtgtgtaacagatccaac
actgtcgtcatcatgaacctgcagggccagattgtgcgtagtttctccagtggtaagcga
gagggtggagactttgtgtgtgcgtcgctgtccccccatggggagtggatatactgcgtg
ggggaggacatggtgctctactgcttcagtgttaccaccgggaagcttgagagaactctc
acagttcatgaaaaggacgttattggcatctgtcatcatcctcatcaaaacttgatatca
acatattccgaggatggacttctcaaaatgtggaaaccttga

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