Haliotis rufescens (red abalone): 124144044
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Entry
124144044 CDS
T07893
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03030
DNA replication
hrf03410
Base excision repair
hrf03420
Nucleotide excision repair
hrf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124144044
03410 Base excision repair
124144044
03420 Nucleotide excision repair
124144044
03430 Mismatch repair
124144044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrf03032
]
124144044
03036 Chromosome and associated proteins [BR:
hrf03036
]
124144044
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124144044
DNA replication proteins [BR:
hrf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124144044
DNA Replication Termination Factors
ELG1-RFC complex
124144044
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124144044
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124144044
Check point factors
HRAD17(Rad24)-RFC complex
124144044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_16
AAA_11
Gp44_lid
AAA_30
AAA_22
AAA_24
Mg_chelatase
DUF815
RuvB_N
DNAX_ATPase_lid
AAA_19
AAA_5
SLFN-g3_helicase
AAA_28
AAA_7
bpMoxR
ResIII
Motif
Other DBs
NCBI-GeneID:
124144044
NCBI-ProteinID:
XP_048240892
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MQAFLKGGTSGLSKTKDKPASGSKQDKEAKTKLIPWVEKYRPRCIKDVAHQDEVVAVLNK
SLEGADLPNLLFYGPPGTGKTSTILAAARDLFGPEIFRSRVLELNASDERGIDVVREKVK
SFAMLTAGGSRSDGKPCPPFKIIILDEADSMTTAAQAALRRTMEKESRTTRFCLICNYVS
RIIEPITSRCAKFRFKPLSEEVLTRRIKLICEKENVDCDEKAIKALMETSEGDLRKAITY
LQSSSRLKAEETITEDVVWEIAGVCPEKMVERVLKTCHSDSYDKLDKTVKHIISEGYSAT
QVLTQLHDEIVSLGELSDHQKSAICEKMAIVDKCLMDGADEYLQLMALFSTVMEQICHHK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttttgaaaggagggacttctggcctgtcaaaaaccaaagacaaaccggct
tcaggctcgaaacaagacaaggaagcgaagaccaaactcataccatgggtcgaaaaatat
cgcccccgatgtataaaggatgttgcacatcaagatgaagttgttgctgtgttgaacaag
tccctggagggggctgatctgcccaacctgttgttctacggcccgcccggcacggggaaa
acctccacgatcctggcagccgccagggacctgtttgggccagaaatattccgtagtcgt
gtgttggagctgaacgcttcggatgagcgtggaatagatgtcgtcagagagaaggtgaaa
tcctttgccatgttgacggcaggcggctccagatctgatgggaagccatgtccaccattt
aagattattattcttgacgaagcggactccatgacaacagctgcacaggctgcgttgcgg
cgtacaatggagaaagaatcgaggaccacacgtttctgcctcatctgtaactacgtcagt
cgaattatcgaacccatcacgtcaagatgcgccaagttccgctttaagccactctctgag
gaggtcttgacaaggagaattaaactcatctgtgagaaagaaaacgtggattgtgatgag
aaggccatcaaagccctgatggagacttcggagggggacctgcggaaagccatcacgtat
ctacagagttcgtctcggttgaaggcggaggagaccattactgaggacgttgtgtgggag
atagcaggggtctgtccagagaagatggtagagagagtattgaagacatgtcattccgac
tcctacgacaagctggataaaactgtcaagcacatcatcagtgaagggtactccgcgacg
caggtgctgacacagctccacgacgagattgtctctctgggggaactcagcgatcatcag
aagtcggccatctgtgaaaaaatggcgattgttgacaagtgtttaatggatggcgccgat
gagtatcttcaactgatggcgttgttcagtactgtcatggagcagatctgccaccacaag
tag
DBGET
integrated database retrieval system
