Haliotis rufescens (red abalone): 124144178
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Entry
124144178 CDS
T07893
Name
(RefSeq) nucleoporin p54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124144178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124144178
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124144178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Ish1
Motif
Other DBs
NCBI-GeneID:
124144178
NCBI-ProteinID:
XP_046369407
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MSLFSNPTQAFGTNPATTAATGFSFGGGAATTTAPAFGGFGGTATTSAPTGFSGFGTGTQ
ATVGQGTGFFGGAPTATTTATAPGFSGFGTNPGTSTTGFSGFGGAVPPTTTASGFTGFGG
FGTTSGFGAGTGTTTGFGAGTGTTTGFGAGTGTTTGFGAPTGATGTSTGFGGFGTTGFGG
AATGQTGFGGGLFAGGQQPQQQQGASDLTNMAMAVSLPQIYGDEKDAMIAKWNQLQACWG
TGKGFYSPNGVVEFKADNPFCRFKAIGYHVIPSGRNEDGLVALMLKKKQTDVAAAQQQIV
DTLHKMFGSKPTLSVCVEGIRPLPEDRTELVIYVLERPQTGPARRVGASDLFTFMNQAGT
KNTLVTQLTVENIVPKMGWSSEQLKEYLDKPPAGIDPVLWQQAKLDNPDPTRLIPVPMIG
FKEVQRRLQHQQEQTRLHQQRLDVMSGDLTDLQNKHSNMLARQEEYKRKHLELGHRLLQV
IVKQEIYRKMGYAIQAEEEHLKVQLEVLQTELNHPTQFKGRLNELMSQIRMQNHVSSQRQ
EVSFQMDTELQSEIKQLLKQQQDGLNHLIQILKDDASDLHLIESSLADTQTRR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgttttccaatcctacacaagcatttggtactaaccccgctacaactgctgcc
acggggttttcatttggtggtggtgcggcgacgacaacggcgccagcatttggtggattc
ggcggcaccgctacaacatcagcaccaacaggcttttcaggtttcgggacgggaacccag
gcgacggtggggcaaggcacaggttttttcgggggtgctcccacggcaacgactacagca
acagcaccaggtttcagtggcttcgggactaaccctggcacatccactacaggtttctca
ggatttggaggagcagtgccaccaacaactactgcctcaggttttacaggatttggtgga
tttggtaccacatcaggctttggtgctggaacgggaaccacaactggctttggtgctgga
acgggaaccacaactggctttggtgctggaacgggaaccacaactggctttggagcaccg
acaggagccacgggaacttcaacaggatttgggggatttggcactacaggatttggtggt
gcagcaacaggacaaactggcttcggagggggattgtttgcaggaggccagcaacctcag
cagcagcagggtgcctctgacctcaccaatatggccatggctgtgtcgctgccgcagatc
tatggtgacgagaaagatgccatgatagccaagtggaaccagctccaggcatgctgggga
actgggaagggcttctacagtccgaatggcgtggtggagtttaaggcagataaccccttc
tgcagattcaaggcgattgggtaccatgtgataccaagtgggaggaacgaggatgggttg
gtggcgctcatgttgaagaagaagcagaccgatgtggctgcagcgcaacagcaaatcgtt
gacacactacacaagatgttcggcagtaaacccactctctctgtctgtgtggagggcatc
cgaccactcccagaggacaggacagagttggtgatctatgtgctggagcgtccacagaca
gggcctgctagacgggttggagcgtcggatctgtttacattcatgaaccaggcaggcact
aagaacacactggtcacccagctgactgtggaaaacattgtgccaaagatgggctggtcc
agtgaacagctgaaggagtacctagataaacccccagctggtatcgaccctgtgctgtgg
cagcaggccaagctggacaacccagatcccaccagactgatcccagtcccaatgatcggc
ttcaaggaggttcagcggcgactacagcaccagcaggaacagacacgactacatcaacaa
cgtctcgatgtgatgtctggtgatctgacggacctgcagaacaagcacagcaacatgcta
gctagacaggaggagtacaagaggaagcacctggagctgggccaccgactgttgcaggtg
attgtgaagcaggagatctaccggaagatggggtacgccatccaggcggaagaagagcat
ctcaaggtgcagcttgaggttctgcagactgaactcaaccaccccacacagtttaagggt
cgactcaatgagctgatgtcccagatcaggatgcagaatcatgtttcatctcagagacag
gaggtgtcatttcagatggacacagaactacagtcggagataaaacagctcctgaaacaa
caacaagatggtctcaatcatctgatccaaatcttgaaggacgatgcctctgaccttcac
cttatagaatcgtccttagcagatacacagacacgaagatga
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integrated database retrieval system