Haliotis rufescens (red abalone): 124145198
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Entry
124145198 CDS
T07893
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124145198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124145198
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124145198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
TPR_HPS5_insect
Motif
Other DBs
NCBI-GeneID:
124145198
NCBI-ProteinID:
XP_048239590
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MALLPKQELQLDTAQEQGFLSFFRGLPEKSSTTLRVFDRTEYYTVHGQDALFVAKDVYKT
TGVVKHLGTGSNKVESVVLSKMNFESLVRDLLLVRQYRVEVYCNKGASKNNDWSLAFKAS
PGNLTQFEDILFGNTEMSASSGVVGVKLGTDNGQRVVGVGFTDVTQRKFTVSEFSDNDQF
SNLEALIVQLGPKECVLMSGETTGDAGRVRQVLERSGLLITERKRADFSSKDIVQDLNRL
LKVKKGDQPNSSTLNELDKTHGTAALSAVIRYLELLSDEGNFGQYTVGSFELGQYMRLDA
AAVRALNLTPSPNEGGNKNQSVLGLLNKCRTAQGQRLLGQWVKQPLIDVNRIEERLNVVE
AVVEDAELRQTLQEDQLRRIPDFQRLAKKFQRQKASLQDCYRVYQAVDKMPQLLETLERH
SGTHQPLLMELFTNPLKELLMDFSKFQEMVETTLDLQQVEHHEYLIKPDFDENLTALREK
IDDLEGQIKGQMNRVARDLGLEANKTLKLESNSQLGYFFRVTRKDEKNLRNNKNYRTIDT
NKNGVRFHNTAVRQLNEEYLQAKEEYGEQQKSVVTEIINIAAGYVDPMLLINDIIAVLDV
LVSFAHVACSAPIPYIRPTIHAKGGAALRLTEARHPCLEMQDDVSYIPNDVSFVRDKEMF
HIITGPNMGGKSTYIRSIGVIVLMAQLGCFVPCEEAEVSVMDSILARVGAGDSQLKGVST
FMAEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISESIATKIKAFCVFATHF
HELTALADVVPTVTNRHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVVEFA
KVKASELEDYQSISLTDTDLDGDSEPAVKKRKCAKQDGEQLIQDFISKVKAIPVSTLSDA
DIVKEVEQLKAVLEAKKNPYITDLLARKQNT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctttgctaccgaaacaagaattacagttagacacagcacaggagcaaggcttcctg
tccttcttcaggggtctgccagagaaatccagcaccaccttgcgtgtgtttgacaggaca
gaatattacactgtccatggccaggatgccctgtttgttgccaaggatgtgtacaagact
actggggtcgttaagcacctggggacagggtctaacaaggtggagtcagtggtcctcagc
aagatgaactttgagtcgctggtgcgcgacctgctgcttgtccggcagtaccgagtggag
gtgtactgcaataagggagcctccaagaacaatgactggtcccttgccttcaaggcatct
ccaggtaacctgacacagtttgaggacatcttgtttggcaacacggagatgtcagcctcg
tcgggcgtcgtgggtgtgaagctgggaacagacaatggacagcgggtcgtaggcgttggc
ttcactgatgtcactcagaggaagttcactgtcagcgagttttccgacaatgaccagttt
tcaaatcttgaggcactgattgttcaactgggcccaaaggagtgtgtgttgatgtcaggg
gagacaactggggatgcaggccgagtgagacaggtccttgagcgcagcgggctgctcatc
acagagaggaagagagcggacttctctagcaaggacattgtacaggacttgaaccgactc
ctgaaggtcaaaaagggagaccagcctaacagctctactctcaatgagctggacaagaca
catggtactgcagccctctctgccgtcatacggtacctcgagctgctgtctgacgagggc
aacttcggccagtacactgtggggagttttgagttgggtcagtacatgagactggacgca
gcagccgttagggctcttaacctgactcccagtcccaatgaaggtggcaacaagaaccag
agcgtgctgggtttgctcaacaagtgtcggacagcccagggtcagcgtctcttggggcag
tgggtcaagcagcccctcatcgatgtcaacaggatagaagagcgtctcaatgtggtggag
gctgttgttgaggatgcggagctgcgccagacgctgcaggaagatcagctccgtcgcatc
ccggacttccagcgtcttgccaagaagttccaacgtcagaaggcatcactacaggactgc
taccgagtgtaccaggcagtggataagatgccgcagttgctggagacgttggaacggcac
tccggcactcatcagccactcctcatggagctcttcactaaccccctcaaggagctgctg
atggacttctccaagttccaggagatggtggagacgacgctggacctgcagcaagtggag
catcatgagtacctgatcaagcctgacttcgacgagaacctcacggctctccgcgagaag
attgatgacttggagggacagatcaagggacagatgaatagggtggcccgagacctgggt
ctggaggctaacaagaccctgaagctggagagcaactcacagctcggctacttcttccgt
gtgaccaggaaagatgagaagaatttgcgcaacaacaagaactaccgcaccatcgacacc
aacaagaatggcgtacgctttcacaacaccgcagtgcgtcagttgaatgaagaatacttg
caagcaaaggaggaatacggagaacagcagaagagtgttgtcacggagatcatcaacatc
gcagctggctatgtagatcctatgttgctcatcaacgacatcatcgccgtgctggacgtc
ctcgtcagcttcgcgcacgtcgcctgcagtgcccctatcccatatatccgaccaaccatt
catgcaaaaggtggggctgccctgcggctgacggaggcacgacacccttgtctagagatg
caggatgatgtgtcgtacatccccaacgatgtctccttcgttagagacaaggaaatgttt
cacatcatcacaggtccgaatatggggggcaagtccacgtacatcagatcgattggtgtt
attgtgttgatggcccagctgggctgcttcgtcccctgtgaggaggcggaggtctccgtg
atggacagtatcctggcccgcgtgggggcgggggacagtcagctgaagggcgtgtccacc
ttcatggcggagatgctggagactgcctccatactgaggtcagccacggagaactcgctg
ataatcattgatgaactggggcgtggaacatcgacatatgacggcttcggactggcatgg
gcaatctccgagagtattgctacaaagatcaaggcattctgtgtgtttgcgactcacttc
catgagttgacggcgctggccgatgtcgtccccacggtgaccaaccgtcatgtgactgcc
ctcaccactaatgataccctaacactgctgtacagagtcaagcctggtgtgtgtgaccag
agtttcgggatccacgtggcggagctggcacacttccccaagcatgtggtcgagtttgcc
aaggtcaaggccagtgaacttgaagactaccagtctatcagcctcaccgataccgacctc
gatggagactcagaaccggccgtcaagaaacgcaagtgtgccaagcaggatggagaacag
ttgatacaggacttcatcagcaaggtcaaggccattcccgtgtcaaccctaagtgacgca
gatattgtaaaggaggtcgagcaactgaaggcggtgttggaggcgaagaaaaacccatac
atcacggacctgttggctcggaaacagaatacatag
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