Haliotis rufescens (red abalone): 124146056
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Entry
124146056 CDS
T07893
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrf03009
]
124146056
Ribosome biogenesis [BR:
hrf03009
]
Eukaryotic type
90S particles
Other 90S particles
124146056
Pre-60S particles
Other pre-60S particles
124146056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
TIP120
Katanin_con80
DUF4332
Peptidase_C39_2
Motif
Other DBs
NCBI-GeneID:
124146056
NCBI-ProteinID:
XP_048249347
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MGYKLARSKKNKGRTWKKGQSSNSNPESKKFREAAKHRFFNQPSGQSSLTVEALSKHDEE
ADDDKMSDMDAQTDTQTVGAKTFNTWATNWTDCTNKTFSKVQRYWSSNSAVHKEVLAVLA
AVTEVIKQQGGQETETEYFAALMTALETAEGEESMAAIGYLLSLVMKRVPVQVLRSRFSQ
VAKQILDMLAKYSDASSTSLLKSLLLSLAAVLRVQEVAVWSNASTQQIYTGLLTFITHRK
PKVRKSAHHAVNIVLKASLCMTQGETPPPHHPVASLTAKYCVQQIEESGGTGDAVDSLHV
LTLLKEIIGEFAQSSVKVVCETILKVMTVSNVLIRSCGLQALHGLFSSQPKSSCLSAELN
AQIITAMYDYQPSESDSQPVRAWLAVMERAHVNLYRLDPRLCVSHLPKLVSACMACLLSD
RLDVVKCASATLKLLLQECLAPSGDILTQLVQTGSSSPVHKIVKALETGLSYQYHSAWGP
VLQVWAAAFQAFGKQCHSLLKKCLLSMADLRETPHFAYRVDLDIALGSAVKAMGPRLFLD
AVPLQISGDGDDPDFPRSWLIPVFRDNVSNTELGFFTSYFLPLAARFRQRAQQCAAEQNV
VAAKSYEALQQQIWSLLPGFCKHPTDIAQSFKGIAKVLGSAITERPDLRMKVLASLRSLI
TQNVDNDSNKAELARFGKNFLPILFNLFTQDQEKGDKAQRLAVLETVRAYIQICDQQLVV
SFFDKSCSKMDEEDSTAVKKLALTDLMIALLSSVGEDQLKTAFDLCVPNLTSLDKTLQKK
SYRILQEICSGKSPASQDFTRKHLKKVQKLLVTSLAKSSPASKAPRLRCLISLLQQLEKP
HMEFFLAVVPEAMLCTKEIAERARVAAYDLLMVMADTMVRWYPDKPESESVGNLFKMVLA
GLAGSPQMISGTLLALTRLLYGHKDKVSSDLLDMLVESVCLLLSSKTREVVKSGLGFIKV
MLSAYTETRLAGQLKTLVSSLVGMKEDCRHHCHTRVKQIYSKLIRKFGYDTIHGMTPARV
HKLLNNIRKTQERAKRKKLADDEEESDDDMGVPKNKPENVEDLLQDTDSEMEEDQDKKKK
KAANQKSRQGKGAWLKEGGDDQIVDFLDASAAKKVLATKPGKKTDKTKKDSDFKMSADGR
LVVTDMGDDKGEKMDSADEDDLDDLFAAFEGGIAKRRRAPKRKLEADSDEEEEPGKSKYK
AGGGGIHRPLTKTGSNPGAKGFGKEYKAKKAGGDVKKTGKHDPYAYVALNRQTLNRRKQA
KMQGQFQGLVRGARKGAAKGTKNKKRNH
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggggtacaaattggctcgttcgaagaaaaataaggggcgaacatggaagaaaggacag
agcagtaacagtaaccccgagtcgaagaaattcagagaagcagcaaaacacagattcttt
aatcaaccatcaggtcaaagttcactgacagttgaagctctgagtaaacatgatgaagaa
gctgatgatgataagatgtctgacatggacgcccagacagacacccagactgtcggtgcg
aagacatttaacacatgggcaacaaactggacagattgtacaaataaaactttcagtaaa
gttcagcgatactggagctcaaattcagccgtgcacaaagaggtgttggcagttctggcg
gccgtgacggaggtcatcaagcagcagggcggccaggagacagaaacagagtactttgct
gcactgatgacggccctggagacagcggaaggggaagagtcaatggctgcgattggatac
ctccttagtcttgtcatgaaaagagttcccgtacaagtcttgagaagtcgattctcccaa
gtagccaagcagatacttgatatgcttgcaaaatacagtgatgccagttcaacttcattg
ttgaaatcgttgcttctaagtctggcagccgttctgcgagtgcaagaggtcgccgtgtgg
tcgaacgcctctacacaacagatatacacagggcttcttaccttcatcacacacaggaaa
ccaaaggtgagaaagtcagcacaccatgcggttaacatcgtgctgaaagccagtctgtgt
atgacccagggagagactccgcccccccatcaccctgtggcctccctcacagccaagtac
tgtgtgcagcagattgaggagagtggaggtactggagatgctgtagacagcttgcatgtg
ttgacgctgctgaaggagataataggagagttcgctcagtcaagcgtcaaagtcgtttgt
gagacaattctcaaggtcatgactgtcagcaatgtgctgatacggtcgtgtggtcttcag
gctctacatggtctgttcagttcccaacctaaatcttcatgcctgtccgcagagcttaat
gcacagatcatcacggctatgtatgactaccagccatcggagagtgacagccagccggtc
cgagcgtggctcgccgtcatggagagggctcatgtcaacctgtacagactggacccacgg
ctgtgtgtgagtcatctgcccaaactggtgtcggcttgtatggcctgcctcctctctgac
agactggatgttgtcaagtgtgcatctgccacactcaagctgttactacaagaatgtctg
gctccatctggtgatatcctgactcaactggttcagactggatccagctctcctgtgcac
aagattgtgaaggccctggagactggccttagttaccagtatcactccgcatgggggccg
gtactgcaggtgtgggcggcggccttccaggcatttgggaaacagtgtcactctctcttg
aagaaatgtctcctgtctatggctgatctgagggaaacacctcattttgcctacagagtt
gaccttgacattgctctggggtcagcagtcaaggccatgggacctcgtctctttttagac
gctgtacctcttcagatttctggtgatggagatgacccggacttccctcgaagttggctg
attcctgtgttccgggataacgttagcaacacagagctgggttttttcacgtcctacttc
ctgcctctagcagcacggttcagacagagagcccagcagtgtgctgcggagcagaatgtc
gttgccgctaaaagctacgaggccttacagcaacagatctggtccttgttgcctggattc
tgtaaacatcccacagacattgcacagtccttcaaaggcattgcgaaagtacttggcagc
gccataacggagaggcctgaccttcgtatgaaggtcctggcctcgctgaggtcactcatc
acacagaacgtggacaacgacagcaacaaggccgagttggcccggtttgggaagaacttc
ctccccatcctcttcaacctgttcacacaggatcaggagaagggggacaaggcccagagg
ctggcggtgctggagactgtccgagcctatatacagatctgtgatcaacagctagtggta
tcattttttgacaagagttgttccaagatggatgaagaggactccacagccgtaaaaaaa
cttgctttgactgacttgatgatagctctactgtcatctgtgggtgaagatcagctcaag
acagctttcgatttgtgtgttcctaatctgacgagcttggacaagaccctacagaaaaag
tcatatcgaatcctgcaggaaatctgctcgggcaagtctcctgcgagtcaggactttaca
agaaaacatctgaagaaagtccagaaattgcttgtgacctcattggccaaatccagtcca
gcatccaaggctccaaggctgcgatgcctcatcagtctcctgcaacaactggagaagccg
cacatggaattcttcttggctgttgtacctgaggccatgttgtgtaccaaggagattgct
gagagggctcgagtggcagcctacgacctcctaatggttatggcagacaccatggttaga
tggtaccccgacaagccagagtcagagtcagtgggcaacctgttcaagatggtgctggcc
gggcttgctgggtccccgcagatgatcagtggaactctcctggctctcaccaggctgttg
tatggccataaagacaaggtgtcgagtgacttgctggacatgctggtggagagtgtgtgt
ctgctgctttcatccaagacgagggaggtggtcaagagtggactgggtttcatcaaggtc
atgctgtcggcctacacagagaccagactggcaggacaactcaagacactggtgtcaagt
ctggtggggatgaaggaggactgtcgtcatcactgccacacccgcgtcaaacagatctac
agcaagctcatcaggaagttcgggtatgacacaatccatgggatgaccccagcccgcgtc
cacaagcttctcaacaacatccgcaagacacaggagagagccaagaggaagaagttggct
gatgacgaggaggagtcagatgacgacatgggtgttccgaagaataaacccgagaacgtg
gaagatttactccaggacacagactcggagatggaagaggatcaggacaagaagaagaag
aaagcagccaatcagaagtctcgacaagggaagggggcgtggctgaaagaaggcggggat
gaccagatagtggatttccttgatgccagtgcagccaagaaagtcctggcaaccaagcca
ggcaagaaaacagacaaaaccaaaaaagactctgatttcaagatgtctgccgatggccgt
ctggttgtcacggatatgggtgatgacaaaggagagaagatggattctgcggatgaagat
gaccttgatgacctcttcgctgcttttgaaggaggaattgccaagcggaggagagccccc
aagaggaagctggaggctgattcagatgaggaggaggagccgggaaaatccaaatacaaa
gctggtggaggtgggatacacagaccgctcacaaagacgggttcaaaccctggagcaaaa
ggatttggcaaagaatacaaggcaaagaaggctggcggtgatgtgaagaagacaggcaaa
cacgacccctacgcctacgttgccctgaacagacagacactgaatagaaggaagcaggcc
aagatgcagggccagttccaggggctggttcggggggcccggaagggggctgccaagggg
acgaagaacaagaagaggaaccactga
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