Haliotis rufescens (red abalone): 124146364
Help
Entry
124146364 CDS
T07893
Name
(RefSeq) cholesterol transporter ABCA5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124146364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrf02000
]
124146364
Transporters [BR:
hrf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
124146364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
SMC_N
ABC2_membrane
cobW
TsaE
AAA_22
Zeta_toxin
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
124146364
NCBI-ProteinID:
XP_048248149
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MSSLFGQLKALLWRNILLKKRNKKQLIQELFYPIYFVLLLSLIKTLAKPSTTPPTPEFPQ
YNLTDPRFILNTKGNILVVPDTPEVKDIIANVEGYIGSLNVIYSATEAEAVALYKATSNN
VSAGIVFNDTGDNPVYSIRTTYNDDLLSTKLFTGKGECLKADRAATDSNCKANKYLTTGF
AWLQRAIEAAFIKKKSATFSLPEVFVQMMPKEEFRSDVTYIQYLASVYFVMAYSSFVNFL
TVNIVAEKEKKIREGMKMMGLRDSVLWLSWSLTYTLLIAVVTAVITIIAYGFGFYSRSSN
LFIFFLLMLLYGISIITMAFAVTPFFRKAQAAGMVTSFATIAISCLYFAVSLTRETTRDG
YHYPYAPGGVWAICLLSPVALALGIDQGIYLDTAKGGMTFANMSEGEFPLSGPIIMLVVD
IILYAVIAVYFDHVIPGEFGPRYPPWYFLMPSYYCQKKRSGDSELSALTSNDHQSINGSF
TGSNPNIEPVHQDLKDKAGVRINNISKDFPSKEETVHAVRGLSLDMYEGHITALLGHNGA
GKTTLINMLCGLTPPTSGTATIYDMDVSNSGDMERLRAMCGVCPQHNILYDDLTTKEHLI
VFAGIKGVAEDGKEEAVTRAMKDADIYEKADTFAKNLSGGQKRKLSVAMALIGDPKIIFL
DEPTAGMDPFSRRHLWSLLQNSKKGRIILLTTHFMDEADILADRKAIISHGTLRCLGSSL
FLKNRFGIGYHLNMVVEPDCNAETVSSVLSEQVKGVEMKRSHAKELAFTLPLSEVSTFSN
MFSSLELKVNGTTQAEKLGIKSYGVSMTTLEEVFLKLGEDTDENPAPGRGIENPAYDENG
LRSTQQVFSESESQVNIEMKDPSNPTQSLANRPTVENLTSQRFWALMKIRFLIIIRTPMA
VIFQILLPIVFVVVGCVLSTLGSSSADSSNPKPVSLFATSATYASAPLAAIDSQNDADST
TFISKVNDTWRVDKNLNISLLLYPNHFLGFNLQQYQTSNNDINYTALYNTTALHSLPTII
NIMSNTLYSIVTGGSNISGSSLPWPSITTQLKYSGSAFSATLVVALAFAVLSPGFAMFLV
VERQTKTRGQQRVAGITFNMYWASLFILNCTMFAIPVVICIIIVGAVPVASLSSAGAMVS
LVLLFITYIPANILVVYNLSFAFDAYETCQAVLPNLMIFGTLLPYVAVSLTDMLGSADAA
TAIHYVMTVINPLYALIGGLYYIDRIHRVSLIARTEIEFGMYFQGDSNILITILMPIVHC
GLLYVLLRVLDVRSTGGNSKEALNCQGTSKVNDIPEDNQDVIGDEDEDVAEERNRVNSLQ
TAAQDAPVAYVQNIRKEFAKDIKAFCKKTKQKTNVAVRNATFAVDCGEVFGLLGPNGAGK
TTALNMIIAETGPTRGKVIVAGHDIRSSMSSAFQAMGYCAQHDALWEKITLREHIEFYGL
LRGLSKKDSVTMADGMIASLKVEEHAKKGAKKLSGGTKRKLSYAISMLGSPEIVLLDEPS
TGMDPQSKRFLWDTISGSFEGTKRGAILTTHYMEEADALCSRVAIMVNGKIECLGPTQHL
KDKYGSGYLLEVKLKTGGRGEDIEARMDSLESHVVALFPQASCMERFEERGQYKIPRDNV
KSLSETFSSLEQTKQTHDVEEYSFSQSTLEQVFLDFAKKQHEEGEEDNVPKSLMRQLSDG
GGDRGSDSRGRGNISVRM
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctctattcgggcagctgaaagctttgctttggaggaatattctcctcaagaag
cggaacaagaaacagcttatacaggagctgttttacccaatctactttgtcctgctcctc
tcacttattaaaactctcgccaagccaagtacgactcccccgaccccggagttcccccag
tacaatcttacagacccacgcttcatcctcaacaccaaaggaaacatcctggtggtgcca
gacacaccagaagtcaaggatattattgccaatgtcgaaggttacattgggagcctcaat
gtgatctacagcgccacagaagctgaagctgtagctttgtacaaagcaacttcaaacaat
gtctcagccgggattgtgttcaatgacacaggagataatcctgtctattcaatacgaaca
acgtacaatgatgacctacttagtactaagttgttcactggcaaaggtgaatgcctcaag
gccgacagggctgcaacagattctaactgcaaggccaataaatatctcacgactggattt
gcttggcttcagcgtgccattgaagctgcatttatcaagaaaaaatctgcaactttctct
ctgccggaagtgtttgtccagatgatgcccaaggaggaatttaggagtgatgtcacgtac
atccagtatctggcgtcggtctactttgttatggcttactcgtccttcgtgaacttcctc
actgtcaacatagtagccgagaaggagaagaagatacgggaagggatgaaaatgatgggc
ctgagggactccgttttgtggttatcatggagtttgacatacactttactcatcgccgtg
gtaacagctgtcatcactatcattgcctatggcttcgggttctacagcagaagcagcaat
ttgttcatctttttcctgttgatgctgctatatgggatctcaatcatcaccatggcgttt
gcagtcacaccgttcttccgcaaggcgcaggcagcaggcatggtcacaagtttcgcaacc
atagcaatcagttgtctgtattttgctgttagcctgacaagggagaccactcgtgatggc
tatcactacccttatgccccaggaggagtctgggccatttgtcttttgtctccagttgct
ttagccttgggcatagaccagggtatttacctggacactgctaaaggaggaatgacattc
gccaacatgtccgagggggagtttccactgtctggcccaatcatcatgctggtcgttgac
atcatcttgtatgcagtgatagccgtatacttcgaccatgtcattcccggtgaattcggt
cctcgataccccccctggtatttcctcatgccatcctactactgtcaaaagaagagaagt
ggggattcagagttatctgcccttaccagtaatgaccatcaaagcatcaatggctctttc
actggcagcaatcctaatattgaacccgtgcaccaagatctcaaggacaaggcaggagtc
cgaatcaacaacatatctaaagattttccatccaaagaagaaacagtccacgctgtccga
gggctctccctggacatgtatgaggggcacatcacagccttgctgggccacaacggtgca
gggaagacaactctcatcaacatgctgtgtggattaactccccctactagtggcactgct
acaatctacgacatggatgtttctaacagtggcgacatggagcgccttcgggccatgtgt
ggggtgtgtccacaacacaacatcctctacgatgacctcaccactaaggagcatctcatt
gtgtttgctggtatcaagggcgttgcggaagatggcaaggaggaagctgtgacaagggct
atgaaagatgcagacatttatgagaaggctgacacatttgccaagaacctcagtggagga
cagaaaagaaagctgtctgttgctatggcactcattggagacccaaagattatcttcctg
gatgagccaacggctgggatggaccctttctcacggcgccatctttggtcactcctgcag
aacagcaaaaagggacgcattatcttgttgacgactcatttcatggatgaagcagacatc
ttagcagatcgcaaggccatcatcagccatggcactctcagatgcctaggatcttcactg
ttcctcaagaacagatttggaattggctaccatctgaacatggtggtcgagcctgactgt
aatgcagagactgtgagctctgtgctcagtgagcaggtcaagggtgtcgagatgaaacgc
tcccatgccaaggagttggccttcaccttgcccctctcggaagtgtccactttctcaaat
atgttttcatccctggagctgaaagttaacgggacaactcaggcagaaaagcttggtata
aagagctatggtgtttcaatgacaacattggaagaagtattcctcaaactaggtgaggac
actgatgaaaatcctgctcctggacgtggaattgaaaaccctgcctatgatgaaaatggt
ctcagatccactcagcaagtgttttccgaaagtgaaagtcaagtgaacatagagatgaag
gatccctcgaaccctactcaaagcttggccaatagacccacagtcgaaaacctgacatca
cagcgattctgggcattaatgaagattcgattcctaattatcattcggactccaatggct
gttatcttccaaatccttctccccattgtatttgtggtggtgggctgcgtcctcagcacc
ctcggctcaagctccgcagatagctccaatccaaagccagtttcactgttcgcaacatct
gccacgtatgcttccgctcctctggcagctattgactctcaaaatgatgctgattccaca
acgtttatctcaaaagtaaatgacacctggcgagttgataaaaatctcaacataagcctg
ttgttgtacccaaaccactttcttggcttcaaccttcaacaatatcagacatcgaacaat
gacatcaactacacagcgttgtacaacacaaccgcactccactccctccccaccatcatc
aacatcatgtccaacaccctgtacagtatagtaactggaggctccaacatctcggggagc
agcctcccgtggccgtccatcacgactcaacttaaatacagtggatcagcgttctcggca
acactggttgtggccctggcatttgcagttctgtctcctgggtttgctatgttcctggtt
gtagagagacagaccaaaactcgaggccagcaaagagtggctggcatcaccttcaacatg
tactgggcgtccttgtttatactgaattgcaccatgtttgccatccccgtcgtcatctgc
atcatcattgtcggagccgtgccggtagcttccctgagttcggccggagctatggtgtcc
ctggtgttgctgttcatcacctacatccctgccaacatcctcgttgtctacaacttgtcc
tttgcctttgatgcgtacgagacgtgtcaggcagtgctgcccaatctcatgatatttggt
acacttttgccttatgtcgctgtgtcactcacggacatgctggggtcggcggatgctgcg
acagctatccactacgtcatgacagtcatcaacccactgtacgccctaatcggaggcctg
tactacatcgacaggattcacagggtatctctcatcgcgagaacagagattgagtttggg
atgtacttccaaggcgacagcaacattctgattacaattctcatgcctatagtacactgc
ggtttgctgtacgtcttgctgagggtgctggatgtacgaagcacaggtggcaatagcaaa
gaggctttgaactgtcagggaacctccaaagtcaatgacatccccgaggacaaccaagat
gtcatcggcgatgaagatgaagacgtcgcagaggagagaaacagagttaattcccttcaa
acagcagctcaggatgctcctgtagcctatgttcagaacatcaggaaagaatttgcaaag
gacatcaaagcattctgtaagaaaactaagcaaaaaaccaacgttgctgtgaggaatgca
acatttgccgtggactgtggggaagtgttcggacttctgggacctaacggtgctggcaag
accacagctctcaacatgatcattgctgagactgggccaactaggggaaaggttattgta
gctggacacgacatacggtcaagtatgtcatctgctttccaagccatgggctattgcgcc
cagcatgatgcattatgggagaagatcactctacgtgagcacattgaattctatggcttg
ctccgtggcctctcaaagaaagacagtgtaaccatggcagatggcatgatcgcatctctg
aaggttgaagaacatgctaagaaaggagccaagaagctgtctggaggaacaaaaaggaag
ctgagctacgctatcagcatgctgggcagtccagagattgtgctgcttgatgaaccttcc
accgggatggaccctcagtccaagagattcctctgggatacaatcagtgggagtttcgag
ggcaccaagcgaggcgccatcctcaccacccactacatggaagaggcagatgccctctgc
tccagagtcgccatcatggtcaatggaaagattgagtgtctggggcctacacagcacctg
aaggacaagtacggcagcggctacctcctggaggtgaaactgaagacagggggacgtgga
gaagacattgaggctaggatggacagtttggagagccatgttgtagctctgtttccacag
gcctcctgtatggagagattcgaggaacgaggacagtacaagatacccagggataatgtc
aaatccttatcagaaactttctcatctcttgaacaaactaaacaaacccatgatgtagag
gagtacagtttcagtcagtccactctggaacaggtgttcctggactttgccaagaagcag
catgaagaaggagaagaggacaatgtgccgaaatctctgatgaggcagctgtctgatggg
ggaggagacaggggcagcgacagccgcggcagaggcaacatcagtgtgcgcatgtga
DBGET
integrated database retrieval system
