Haliotis rufescens (red abalone): 124146791
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Entry
124146791 CDS
T07893
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf00100
Steroid biosynthesis
hrf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
124146791
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hrf01006
]
124146791
Enzymes [BR:
hrf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
124146791
Prenyltransferases [BR:
hrf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
124146791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
124146791
NCBI-ProteinID:
XP_046373197
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MDLLRSVSHPDEILALVRYKLGDCRAVLPQCDTELMTPTLRKCYEYLRLTSRSFAAVIQA
LDDELRDSVCIFYLVLRALDTVEDDMTIPNEVKLPILKSFYKNLLDPDWCYTDSKEKDRI
VLEDFPTISYEFRKLSKISKEVISDICRQMGEGMCVYMEKNVETLADWDEYCHYVAGLIG
IGLSKLFSASGLEGEFVGRDLDLANRMGLFLQRTNIIRDYLEDSEEGREFWPKQVWSKYA
KNLRDFADPCHRGEAISCLNDLISRTLELIPDCIKYMSQLQNKSVFQFCAIPQVMAIATL
ERCYNNPSVFTGVVKIRKGEAVKMIMGSNSTEKVKAIMVHFTNEISSRIPARDPNAERTR
KLCEDVLACCKTKQEFTTSSIYPPLYMSCAMMLAAISYNYWSQIEAVYHSMT
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggatttgttgcgttcagtgtcccaccctgacgaaatactggcattagtgcgctacaag
ctgggagactgtcgggctgtcttgccacaatgcgatacggagttgatgaccccgactctg
agaaagtgttacgagtacctgaggctgacgagtcggagctttgctgctgtcatacaggcc
ctggacgatgaactgagggattcagtgtgcatattttacctggttctgcgagctctggac
actgttgaagatgacatgacaatccccaacgaagtgaagctgcccatcctcaagtccttc
tacaagaacctgctggatcccgactggtgctacacagacagcaaggagaaggacaggata
gtgctggaagacttccctacgatatcctacgaattccgcaagctgtccaaaatatcaaag
gaagtgatatcagacatatgtcggcagatgggggaaggcatgtgcgtgtacatggagaag
aatgtagagactctggcagactgggacgagtattgtcactatgtggctggcctcatcgga
attggtctatcaaagctgttctctgcttctggtcttgaaggggagtttgttgggagagat
ttggatctggccaacagaatgggtctcttccttcagaggacaaacatcattcgcgactac
ctggaggacagtgaggagggccgtgaattctggcccaaacaggtatggagcaagtatgcc
aaaaatctccgcgattttgctgacccctgtcacagaggtgaagctatcagttgcctgaat
gatctgatcagtagaaccctggaactcatccctgactgtatcaagtacatgtctcaacta
cagaacaagtctgtctttcagttttgtgcaatccctcaggtgatggctattgctaccctg
gagcggtgctacaacaatccaagtgtcttcactggtgtcgtcaagatcaggaagggggag
gcagtgaagatgatcatggggtcgaactccacagagaaggtcaaggccatcatggttcac
tttactaatgagatatcaagtcgcattcctgcccgtgatccaaatgcagagagaactaga
aaactgtgtgaagatgtcctggcctgctgcaagacaaaacaggagttcaccacgtcaagc
atctaccctcccctctacatgtcctgtgccatgatgctggcagccatctcctacaactac
tggtcccagatagaggccgtctatcactcgatgacgtaa
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