Haliotis rufescens (red abalone): 124146912
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Entry
124146912 CDS
T07893
Name
(RefSeq) DNA polymerase delta catalytic subunit-like isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03030
DNA replication
hrf03410
Base excision repair
hrf03420
Nucleotide excision repair
hrf03430
Mismatch repair
hrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124146912
03410 Base excision repair
124146912
03420 Nucleotide excision repair
124146912
03430 Mismatch repair
124146912
03440 Homologous recombination
124146912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrf03032
]
124146912
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124146912
Enzymes [BR:
hrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124146912
DNA replication proteins [BR:
hrf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124146912
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124146912
MMR (mismatch excision repair)
DNA polymerase delta complex
124146912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
divDNApol
Motif
Other DBs
NCBI-GeneID:
124146912
NCBI-ProteinID:
XP_046373425
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MITDTENTNKHKEVPRMDKRKGKGGNNGPTPKKKSRFEEEDDPSQFEADLAMMEDFENDM
MDDEAAGGSGDCRPGPEMKAPKSKWARPAAPDLDPKTDTVTFQQLDVDNYVGKHLAGMPG
ATQGPVPIIRMYGITQAGNSVMAHIHGFAPYFYVPAQPGFKEKDCGTFKDALEAAVKKDM
RSNREGVVQAVLAVDCVIRESIYGYHGNRKIPFLKITVALPRLIAPSRRLLEQGFVCPGY
SQYGFQTYESNIDFEIRFMVDAHVVGCNWIEIPAGKYVLRTKDAKDGRLPPMSRCQVELD
VSWEDFVSHATEGEWSKVAPFRILSFDIECAGRKGVFPEADKDPVIQIANMVKRQGERDP
FVRNVYTLNTCAPVVGSEVLSFKTEKEMLEKWAAFVRDIDPDLITGYNIQNFDFPYLINR
AAHLKVRDFTYLGRIKDIPSVIKESMFQSKQMGKRENKVINIEGRTQFDLLQILLRDYKL
RSYTLNAVSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAILPLRLLDKLMCV
INYMEMARVTGVPLPFLLSRGQQIKVMSQLLRKAKEQDLVIPSQKVDTGDEYEGATVIEP
EKGYYDAPIATLDFSSLYPSIMMAHNLCYTSLLNPSVIQKEGLTAEQYIKTPSGNLFCKS
TVRKGLLPEILEHLLSARKKAKADLKKETDPFKKGVLDGRQLALKISANSVYGFTGAQVG
KLPCLEISQSVTAFGRMMIEQTKQYVEERYTIANGYKHDAKVIYGDTDSVMCKFGVETVA
EAMELGKEAAEVISLKFVSPIKLEFEKVYFPYLLINKKRYAGLYWTNPDKHDKMDCKGIE
TVRRDNSPLVANLINMCLQLLLIDRDPDGAVQHVKQTISDLLCNRVDISQLVITKELTKT
DDDYAGKQAHVELANKMKKRDAGNAPKLGDRVPYVIIAAAKGTAAYMKSEDPIYVLENNI
PIDTQYYLENQLSKPLLRIFEPILGEKKAESVLLKGDHTRTKTVVASKVGGLAAFTKKKS
TCIGCKTPLSVEGVSVCKHCKSQESALYQKEILQLQVLEEKFSRLWTQCQRCQGSLHEDI
LCTSRDCPIFYMRKKVQKDLADQDKLIMRFGVPTW
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgataactgatacagagaacacgaataaacataaagaagtaccaaggatggacaagagg
aaaggaaaggggggtaacaatggaccaaccccaaaaaagaaatccaggttcgaggaggag
gatgacccgtcccagtttgaagcggacctggcaatgatggaggactttgagaatgacatg
atggatgacgaagctgctggaggttcaggagactgtcgaccaggacccgaaatgaaggcc
cccaaaagcaagtgggcacgacctgctgcccctgaccttgaccccaagactgacacagtg
acctttcagcagttggacgtggacaactatgtggggaagcatctggccggcatgcccggg
gccacacagggcccagtgcccatcatccggatgtacgggataacacaagcgggcaacagt
gtcatggcccacatccatggatttgctccgtacttctacgtcccagcacagccgggcttc
aaggagaaggattgtgggacatttaaggatgctctggaggcggctgtgaagaaggacatg
cggtcgaaccgagagggcgtggtccaggcggtgctagctgtggattgcgtcatccgagaa
agcatctatggttaccatggcaacagaaagattccctttctgaagattacggttgcgctg
cctcgtcttatcgccccatcccgccggctcctcgagcaaggctttgtgtgcccgggctac
agccagtatggcttccagacctacgaaagtaacatagacttcgagatcaggtttatggtt
gacgcccatgttgttggatgtaactggattgagattcccgcggggaaatatgtcctccgt
accaaggatgctaaagatggccgacttccgcctatgtctcgctgtcaggtcgagttggac
gtgtcgtgggaagattttgtgtcccatgctacagagggggagtggtcaaaggtcgcccct
ttccggatcctcagcttcgacatcgagtgtgctgggcggaaaggtgtttttccggaggct
gacaaagaccctgtgatacagatagctaacatggtgaaaagacagggggaacgtgatccg
tttgtccgcaatgtgtataccttaaacacgtgtgcgccagttgtggggtcagaggtcttg
tccttcaagaccgagaaagaaatgttggagaaatgggcagcatttgtccgagatatagac
cctgacttgatcaccggctacaacatacagaactttgacttcccgtacctgatcaaccgg
gctgcccacctgaaggtgcgcgacttcacgtacctgggccgcatcaaggacatcccctct
gtcattaaggagtccatgttccagagcaaacagatggggaagagggagaacaaggtcatc
aacattgaaggcaggacgcagttcgacctgctgcagatattgctgagagactacaaactg
cggtcatacaccttgaacgccgtctcctttcacttcctgcaggaacagaaggaagatgtc
caacattccatcatcacagatctccagaatggtaacgagcagacaaggcgtcggttggct
gtgtattgcctgaaggacgccatcttgccgctccgactcctggacaagttgatgtgtgtc
atcaactacatggagatggcccgagtcaccggcgtgcccctcccctttctgctctcccga
ggtcaacaaatcaaggtcatgtcacagctgctacggaaggcaaaggaacaggacctagtc
ataccctcgcagaaagtagacacaggggacgagtacgagggtgccacggtcatcgaaccg
gagaaagggtattatgatgctcccatagccacactggatttctcctcgctgtacccgtca
atcatgatggcacacaacctctgctacacctccctcctcaacccatcggtcatccagaag
gaagggttgacggcagagcagtacatcaagacacccagcgggaacctgttctgcaagtcc
acagtcaggaagggtctgctgccagaaatcttggagcatttgctctctgccaggaagaaa
gctaaggctgatctgaagaaggagactgacccgttcaagaagggggtgttggatggccgt
cagctcgcactgaagatcagtgctaactccgtgtatggattcacaggtgctcaagtcggc
aagctgccttgtctggagatatctcagagtgtgacggcctttggtcgtatgatgattgaa
cagaccaagcagtatgtggaggagagatacaccatcgccaatggatacaagcatgatgct
aaggttatctatggtgacacagattctgtgatgtgcaagttcggtgtggagacggttgcc
gaggcaatggagctcgggaaggaagcagcagaggtcatctctctcaagtttgtcagcccc
atcaaactagagttcgagaaggtatacttcccctatcttctgatcaacaagaagcggtac
gctggcctgtactggacgaacccagacaaacatgacaagatggactgcaagggtatcgag
acggtgcggcgagacaacagccccctggtggccaacctcatcaacatgtgcctgcagctg
ctgctgattgatagagatccagatggcgctgtgcaacacgtgaagcagactatctcagac
ctcctgtgtaatcgtgtggacatctcgcaacttgtcatcaccaaggagttgaccaagact
gatgacgactacgcagggaagcaggcacacgtggaactagcgaacaagatgaagaagcga
gacgcaggcaatgcgcccaagctgggagaccgagtgccgtatgtcatcatcgccgcagct
aagggcacagcagcatatatgaagtcagaggatccaatatacgtcctggaaaacaacatc
ccaattgacacacagtactacctggagaatcagctgtctaaaccactgctaaggatcttc
gagcccatcctgggggaaaagaaagccgagtccgtcctgctcaagggtgaccacacccga
acgaagactgtggtagcatccaaggtgggcggactggctgccttcaccaagaagaagagt
acatgcatcggctgtaagacacctctcagtgtggaaggtgtgtctgtgtgcaagcactgc
aagagtcaggagtcggcactctaccagaaggagatcctgcagttgcaagttctggaggag
aagttctcccgactttggacccagtgccagaggtgtcagggaagtttacatgaggatatc
ctgtgtacaagtcgagattgccccatattctacatgaggaagaaggttcagaaagacctg
gctgatcaggacaaactcatcatgagatttggggtgccgacttggtag
DBGET
integrated database retrieval system
