Haliotis rufescens (red abalone): 124147224
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Entry
124147224 CDS
T07893
Name
(RefSeq) F-box/WD repeat-containing protein 1A-like isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04120
Ubiquitin mediated proteolysis
hrf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124147224
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124147224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrf04121
]
124147224
03036 Chromosome and associated proteins [BR:
hrf03036
]
124147224
Ubiquitin system [BR:
hrf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124147224
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124147224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
F-box-like
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IP5PC_F
WD40_like
F-box
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
Beta-prop_WDR35_TULP_N
KNTC1_N
WD40_2
F-box_5
Beta-prop_NWD2_C
Frtz
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
124147224
NCBI-ProteinID:
XP_046373824
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MSSMETTMETCSSIDDRPDEKRAESAAVVKSSTKMMPEYSEKFLQERDICTTQFEKWTEY
EQIAFVEHLLSRMCHYQHGQINAYLRPMLQRDFITALPAKGLDHVAENILGYLDAPSLCA
AELVCKEWYRVISEGNLWKKLIERKVLTDSLWKGLADRRGWCQFLFKPKPGEPPKDHKFY
RSLYPQIIQDIDRIESNWRTGRHTLQRIHCRSETSKGVYCLQYDDSKIISGLRDNTIKVY
MWDRNTLECVQVLTGHTGSVLCLQYDENIIISGSSDSTVRVWDVKTGEMLNTLIHHCEAV
LHLRFNDGIMVTCSKDRSIAVWDMQSPTEINLRRVLVGHRAAVNVVDFDEKYIVSASGDR
TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEYGACLRVLEGHE
ELVRCIRFDGKRIVSGAYDGKIKVWDLQAALDPRSPAGTLCLRTLVQEHSGRVFRLQFDE
FQIVSSSHDDTILIWDFLNVPLPEGGKSPQRTYTYVSK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctatggaaacaacaatggaaacatgtagttctatagatgataggcccgatgag
aaaagggcagagagtgcagctgttgtgaagagttctacgaagatgatgccagagtattcc
gagaagtttttacaagagagagatatttgtaccacacagtttgagaaatggactgaatat
gaacaaattgcatttgttgaacatttattatcacggatgtgtcattatcaacatggacag
attaatgcttaccttaggcccatgctacagagggattttatcacagcacttccagccaaa
ggtctcgaccatgtggcagagaacatcttgggctatttggatgccccctcgctgtgtgcg
gcagagctggtgtgtaaggagtggtaccgtgtcatctcagagggcaacctgtggaagaaa
ctcatagaacgcaaagtgctgacagacagtctgtggaagggactagcagacaggagagga
tggtgccaattcttgtttaaacccaagcctggagaaccaccaaaagatcataaattttac
agaagtctgtacccccaaattattcaagatattgatagaatagagagcaactggcgtaca
gggcgccacacattacagaggattcactgtcgcagtgaaaccagcaagggggtgtactgt
ctccaatatgatgatagcaagatcatcagtgggttgagagataacactatcaaggtatat
atgtgggaccgcaacacactggagtgtgtccaagtattgacaggccacacaggatctgtg
ctgtgccttcagtatgacgagaacataatcatatctggatccagcgactccacagtcaga
gtgtgggatgtgaagaccggggagatgctgaacacactgatccaccactgtgaggctgtc
ttgcatctcaggttcaatgatggcatcatggtcacctgctcaaaggaccgctcgatagct
gtgtgggatatgcagtcccccactgaaatcaacttgaggcgggtgcttgtgggtcaccga
gctgctgtcaatgttgttgactttgatgagaaatacattgtctcggcatctggagacagg
acaatcaaggtgtggaacacttctacctgtgagtttgtgcggacactaaatggtcacaag
agaggtattgcctgtcttcaatacagggacagactagttgttagtggcagctcagacaac
accatacggttatgggacatagaatatggcgcctgtctccgggtgttggagggccatgag
gagctggtcaggtgcatccgctttgatggcaagaggattgtcagtggagcttacgatggc
aaaatcaaagtgtgggatctgcaagctgcactggatccccgctcaccagcaggcactctc
tgtctcagaactttagtgcaggaacattcaggacgtgtattccggctccagtttgatgaa
ttccagatagtgagcagttctcatgatgataccattctcatctgggactttcttaacgtg
cccttgccagaaggtggtaaatcgcctcagagaacctacacctacgtatccaaatga
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