Haliotis rufescens (red abalone): 124147665
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Entry
124147665 CDS
T07893
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124147665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124147665
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124147665
mRNA degradation factors
5'-3' decay
Decapping complex
124147665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
WDR55
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
MG280
Motif
Other DBs
NCBI-GeneID:
124147665
NCBI-ProteinID:
XP_048253363
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MDTQDSAQSSLNSTDTSQLLRELQALNLDRSPGSSHGSFGTGRNIPGTGDRDMPASGEAT
LTQLMMTMYSSAPKQQIVLQGNDNQNSFSVYGRDVDVYLGEARAGDSLATTAGSNKVKIT
PVVNYDWEPKYYIGNLVAVHRDNDFVAYVLKGKSNGVVRVITRKTAERVLLKDFDGRVID
VAFAHTDEILLAAVDEIGNLFVHEIREEDGKVVSHLLLHIKHPQATPSSEFHRVIWCPYI
PEDCEEAMTDASSQDASRVLVLTHDAVAEIWSVDMVTKEHGCGPHYPNTIASGLITINSH
SKPIVDAAFSPDGTAMATASLDGEVKFFQVYMQEGTSPRCLHQWKPHEGKPMSCLFFLDD
HKNLSADAQFWKYAVTGANQNQELKIWSCESWNCLQTIRFVNPPNMDGGPLAEVSLKAGL
DLGAKYLVLSDRMRKMLYVLQVHQEGTSTTAHVSSVSEFLLAQPCLSYAILDASTKKLKK
SPNDSHLDEITTGDLDGDATDDINRLHRPEETTTGVQLRLFAVHSKALQELLIRYKPESS
VPPPSTPSVSSISHDETGLRDALSDISMSVEQSLPESHGSNSSALHDNSNPVLLTPDAFT
SPSPNNKTVSVQNSLDHVRGSGTIDHMRGSGSSTSSFTHVTPMNDEIFTPRSSASGDRTV
MSPGSSIAHTPSSKGDAQSQDVTPTNMPLPPIDSVEEEELATPKGGPESEKGDAHNHSAQ
EVLDDFFTQGGASIRSVDSASSTGRFDVSEIVPPQPGQPEVRHRTDYDENDQEVAEVLGE
SYVAVEEEGGEAEEFQEGETTGEELHVPRAWPKPPDVPGVNQNLSSEAVVRDNSSREETQ
DDDDDDDEEEGDDGDDEAEIEEEIEVVEEGSEEEQQNHSCFRMSPRLAERIGKVKQSPRS
AYGSSEAVTAAVRAGVDRESWREMQKNMQDMTAVLQAQQMHITELQQQIARQHDQQLELQ
QQKEEQWRLQQVAATQPGLQEQMQRIEDVMTSRIERVLTQHLGRQTQTLQDVMTRTEGRH
RQEQERLQTTVTQSVSQAITNNLERAVRAEMKNTVVPTVTKILDPVKDQLHQDLAHKLTA
TDVLLKDNIAKMVRSRQTVEAIANATGSAIQAPIQAAYREAFQNMVVPSFERASQSMFLQ
VNEAFQRGTTEYAGQLEGHLERIRQRHQESRDPIVKQLQSLVDNFQVTSGEMKTEILNTL
QSELNTSLQNALANLQEKTLNHVREAVKEEVSVAVREHGASLSDQLMNYVRSGAATPVQI
SPDLGHLQTLRTSVINAVRLGNINEAFQTALSASNLELVMFTCENVNPSLVFGQDPCPLK
QPVLLSLVNQLSADFTSHTELKIKYLEEAVISLDPNHPLTAEHMHGVLNGLTQKLKLFMA
QHPNDKLTRSFKMLAMASQSLIT
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggatacccaagacagcgcccagtcgtctctgaacagtacagatacaagtcagctcttg
agagaattacaagctctgaacttagacagatctcccggctcttcacatggaagtttcgga
acaggaagaaatatcccaggaacaggggatagggacatgccagcatcaggggaggcaact
ctgacccagctgatgatgacaatgtacagttctgcaccaaaacaacagatagtgctgcaa
ggcaatgacaaccagaacagcttcagcgtgtatggacgggatgtggatgtgtacctcggc
gaggctcgggcaggagactcacttgccaccactgctgggagtaataaggtaaagattacc
ccagtggtgaactacgactgggaaccgaagtattatatcggcaacttggtggctgtacac
agagacaatgactttgtggcgtatgtgcttaaaggaaaatcaaatggagttgttcgagtc
atcactagaaaaacagcagagcgggtgctattgaaggattttgacggacgggttattgac
gtcgcctttgcccatactgatgaaattctcctggctgctgtggatgaaatagggaacttg
tttgtgcatgaaattagagaagaagatggaaaagtggtttcccacctgctgctgcatatc
aagcacccccaggccacgccgtcctcggagttccatcgcgtcatctggtgcccgtacatc
cccgaggactgcgaggaggccatgacggatgcttcatcacaggacgcctcgcgggtgctg
gtgctcacgcacgatgcagtggcggagatttggagcgttgacatggtaaccaaggaacat
ggatgtggccctcactatccaaatacaatagcgagcggtctcattacaatcaacagtcac
agcaagccaattgtcgatgctgcattttcccccgatggcacagcgatggcaacagcgagt
cttgatggggaggtgaaattcttccaggtctacatgcaggagggcacgtctcccaggtgt
ctgcaccagtggaagccccatgaaggcaagcccatgtcctgtctcttcttcctggacgat
cacaaaaacctcagtgctgatgcccagttttggaagtatgcagtgactggcgccaatcag
aaccaggagctgaagatctggagctgcgagtcctggaactgtctacagacaatcagattt
gtgaacccacctaacatggatggtggtccactggcagaggtgtccttgaaagcaggcctc
gatcttggtgctaaatacctggtgctgtcagacaggatgcggaagatgttgtatgtgtta
caagtccaccaggagggcacatcgaccacggcacatgtcagctccgtgtcagagttcctg
cttgcccagccctgcctcagttacgccatcctggacgccagcaccaagaagctgaagaag
tcccccaatgactcccatctggatgaaataaccacaggggacctagacggcgacgccaca
gatgacatcaaccgcctacacaggccagaggagaccaccacgggcgttcagctgagactg
tttgcagttcattcaaaagctctgcaggagttgctgatccgctacaaaccggagtcctcg
gtgccgcccccctccaccccatcggtcagctccatctctcacgatgagacaggtttgcgt
gacgccttgtcggacatcagcatgagtgtggagcagagtctccccgagagccacggcagc
aactcctccgccctccacgacaactccaacccagtgctgctcacacccgatgcgtttacc
agtcctagtccaaacaataaaactgtgtcagtgcagaactctctggatcatgttcgaggc
agtggaacgatagatcacatgcgcggcagtggatctagtaccagtagcttcactcacgtc
actcccatgaacgatgagatcttcaccccacgtagctcagcatccggggaccggacagtc
atgtcgccaggcagttccatcgcccacacaccctcgtccaagggcgatgcccagtcccag
gatgtgacgcccacaaacatgcccctcccccccatcgactcagtagaagaagaggagctt
gccacgccaaaggggggacctgagtcggaaaaaggggatgctcacaatcattctgcacaa
gaagttctggatgatttcttcacccagggaggtgcctccatcaggtcggtggatagtgcg
tccagcacggggcggtttgacgtcagcgagatagttcccccccagccagggcagcccgaa
gtcaggcaccgtactgactacgacgagaacgaccaggaggtggctgaagtgctaggtgaa
agctatgttgctgttgaggaggaagggggtgaggctgaagagttccaggagggggagaca
actggagaggagttacatgttccccgtgcctggcccaaaccaccagatgtacctggagtt
aaccaaaatctgtcatcagaggctgtggtacgggacaacagctcaagggaggagacccag
gatgatgacgatgacgatgatgaggaagaaggtgatgatggcgatgatgaagccgagatt
gaggaggagattgaagttgttgaggagggcagcgaggaagagcaacagaaccattcttgt
ttcagaatgtcgccaaggttagctgaaaggataggcaaagtgaagcagtccccacggtct
gcctatggatcaagtgaggctgttacggcggctgttcgagcgggggtagatcgggagtca
tggagggagatgcagaagaacatgcaggacatgacggcggtgctgcaggcgcagcagatg
cacatcacggagctgcagcagcagatcgcgcggcaacacgaccagcagctggagctgcag
caacagaaggaggagcagtggcgcctgcagcaggtcgccgccacgcagcccggcctgcag
gaacagatgcagaggatcgaggatgtcatgacgtcacggatagagcgggttctcacacag
caccttggcaggcagactcagacgttacaagatgtaatgacccgcacagagggccgacat
cggcaggaacaggagaggctgcagaccacagtgacgcagtccgtcagtcaggccatcacc
aacaacctggagagggctgtccgtgctgagatgaagaacacggtggtccccacggtgacg
aaaatcttagatccagtgaaagatcagcttcatcaagatctggcacacaagctcactgcc
actgatgtactactcaaagacaacatcgctaagatggtcaggtctcggcaaacagtggag
gctatagccaatgcaaccggcagtgccatccaggcccccatacaagctgcctacagagag
gccttccagaacatggtcgttccatcgtttgagcgagcctctcagagtatgttcctgcag
gttaacgaggccttccagaggggcaccaccgaatatgcgggtcagctggagggtcacctc
gagcgtatccgacagcgccaccaggaatcccgtgaccccattgtcaagcagctgcagtct
ctggtggacaacttccaggtgacgtccggcgagatgaagacggagatcctgaatacgcta
cagtccgaactcaacaccagcctgcagaacgcactggcaaacctgcaggagaagacactc
aaccatgtgcgtgaggcggtgaaggaagaggtcagcgtggcagtcagggagcatggtgcc
agtctctccgaccagctcatgaactacgtgcggtcaggcgctgcgacgccggtacagata
tccccagacctcggccacctacagactctgcggacatccgtgatcaacgctgtgagactc
ggcaacatcaacgaagctttccaaactgcgctgtcagcatctaaccttgagcttgtgatg
ttcacgtgtgagaatgtgaacccgtccctggttttcggccaggatccctgccccctcaaa
cagccagtgcttctgtccctcgtcaaccagctctccgcagacttcacctcacacaccgag
cttaagatcaaatacctggaggaggcagtgataagtttggaccccaaccaccccttaact
gcagaacatatgcatggagtgttgaacggactaacccagaaactgaaactcttcatggca
caacaccccaacgacaaactgacacgatctttcaagatgttggccatggcgtcccagtcc
ctcattacatga
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integrated database retrieval system
