KEGG   Haliotis rufescens (red abalone): 124148924
Entry
124148924         CDS       T07893                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
hrf  Haliotis rufescens (red abalone)
Pathway
hrf03030  DNA replication
hrf03410  Base excision repair
hrf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124148924
   03410 Base excision repair
    124148924
   03420 Nucleotide excision repair
    124148924
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hrf03032]
    124148924
   03400 DNA repair and recombination proteins [BR:hrf03400]
    124148924
Enzymes [BR:hrf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     124148924
DNA replication proteins [BR:hrf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    124148924
DNA repair and recombination proteins [BR:hrf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      124148924
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N Cytochrom_CIII
Other DBs
NCBI-GeneID: 124148924
NCBI-ProteinID: XP_048254478
LinkDB
Position
Unknown
AA seq 2277 aa
MVLQNSGRFKSEKDQGSGDSTGREDSTEKRLSRATLNDEIDLRFGFDRYKDPQEKTGWLI
NMHPTDVLDEDKRLVSAVDYYFIQDDGARFKVTLPFKAYFYVATKQDCEREVASFLTRKF
SGKIATIESVVKEDLDLHNHLVGLKRKYLKLSFLSVEDLMKVKREIFPAVRKNKEREKQN
EAYTAMLTSHLTGEDGVSKKIADQMDNIIDIREYDVPYHVRVSIDLKIFVGHWYSVRGRG
GAPPEIRQREDLVDRPDPVVFAYDIETTKLPLKFPDAQIDQIMMISYMIDGQGYLICNRE
IVSQDVEDFEYTPRPEFEGPFIVFNEPDEVSLIKKFFEHFQEVRPQICVTYNGDFFDWPF
VEARAAVHDMDMFREIGFQKDNQGEYKSRHCIHMDCFRWVKRDSYLPVGSQNLKAVAKAK
LRYDPVELDPEEMCRMASEEPQVLANYSVSDAVATYYLYVKYVHPFIFALCTIIPMEPDE
VLRKGSGTLCEALLMVQAYHANIIFPNKQESVLNKLTEDGHVLDSETYVGGHVEALESGV
FRADIPCRFRMVPEAFKTLIDSVERTMKHAIEVEEKIPLDTVTNFDEVCSDVVEKLEMLR
DCPNRLENPIIYHLDVGAMYPNIILTNRLQPPAIVDEATCAACDFNKPGALCQRKMPWMW
RAEFMPASRNEFHRIQQQLENEKFPPYFPGGEPRAFHQLPKDEQAAIEKKRLAEYCRKAY
KKTKITRMQEQTATICQRENSFYVDTVRAFRDRRYEFKGLTKVWKKKLSEAESKKDAAET
KRSNGMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGASIIKKAREIVE
QIGRPLELDTDGIWCVLPATFPENYVIKTTNPKKAKVTISYPGAMLNVMVKDHFTNHQYQ
ELEDQGSLNYSLRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGF
EVKRRGELQLIKIFQSSVFEAFLKGITLEECYDAVAKIADYWLDVLYSKAANMPDSELFE
LIAENRSMSRKLDDYGEQKSTSISTAKRLAEFLGDQMVKDAGLACRFIIAKKPEGAPVTE
RAIPLAIFQAEPSVKKHFLRKWLKKADMSHFDIREILDWEYYIERLGGTIMKIVTIPAAL
QQVPNPVPRIPHPVWLHKKLLERNDVFKQKKISEIFAPMAKKTSQMGMEEDSEDILSSSQ
NGIGDMEDIGGRPPRSGLAVSHKRKRGNSDTDTPNTQLDSQTSDLSQNWRDVLGAPPPMG
STKEERKVWLEYHKKKWQMQAKEKQERKRRRLDFDTPATASLPARGLGGFLRRTARSMMD
MPWQVVQLMETSLPGQYRLWAVIGNDLHSIKLNIPRIFYVNQKNPKDGEGAMWRKVQKTL
PRSHPVFHLYEYSVPEHMYMEHTNDINADLSSPDIEGVYETQVPLLFRALVQLGCVVTVN
RDFAKVMAGRETDTFDLDNLEFRTLAQFSYLDPGTIKHLYMYHHVCGNKMMFGLFFPGSK
KGTIFVVDTVRSDQMPNVGALYNAERNAKVTKGADETTLPEAGYTFEVKLEKDVRQAHRA
IQRMLSAYKDEKRGPTFIAIQSPLDFSHLTSVMPGLCDFPLVPIHITDSENLYNVLDWQR
VGSRRLLQHYMNGEIILQAMMEQCRYLHIPIGNMPRDITLFGCDLFFARHLHKHNHLLWC
SPTERPDLGGKEADDNRLCMELEESSSVEVNNIGCYPTVCVELDIASLAVNTIIESAHVN
DQEGASAVSFDTMPQTSLEDMMQGQGAATMLASYDETALCSSTFRILKSMVHSWVREVTA
YGNVFADNQIIHFYRWLRSPNGLLYDPALRRTLHNMMKKVFMQLIAEFKRLGSQIVYANF
NRLLLCTKKRRLVDALAYVEYITNSIKSRELFHLVDITYEQCWEFLMWLDPANHGGVRGK
LPTLPGGNKTHKVGGEDDSDEDLPVEEDDGEELNKSDTEDEPEIEMNWNIVHFLPEAAAC
QTNFSMIVAGYILSVYNQIDEEQRRLTPGNTPIRRRDSSQTQKHLDPSATPSTVSFAQDL
VQGELAQQMFAITQKIQKKLAGSKSNQGNLAAEFPQLPGSHLPLNNPSLEFVKAVCKVLA
LDTNVTIQVTKLKRDLLKLIGVGEFSPAAQFADPCLSYVLPEVICKSCNHIRDLDLCRDP
YLSQDGAGSVWSCVQCRAEYDVEEIEQSLVDAVHRKSMAYILQDLKCIKCKGVKENNMKR
YCSCAGDYSNTVSLADFGKQLKTFSGIASHYKMTLLAETVEWLLSMNPAIAVSRVTS
NT seq 6834 nt   +upstreamnt  +downstreamnt
atggtactacagaactctggccggtttaagtccgagaaggatcaaggttccggagattcc
acggggcgagaagacagcactgaaaaacgactaagcagagcgaccttgaatgatgaaatt
gaccttcgcttcgggtttgatcggtacaaggacccccaggagaaaacaggctggctcatt
aatatgcatcctacggatgtgcttgatgaagataagcgactggtcagtgctgttgattat
tatttcatccaggacgatggagcacgttttaaggtgacattgcctttcaaggcctacttc
tacgtggccacaaagcaggactgtgagcgagaggtggcttcatttctgacacgaaagttc
tccgggaaaattgccactattgaaagtgttgtgaaagaagatcttgacttgcataatcac
ctggtggggttgaagcggaagtacctcaagctctccttcctcagtgtcgaggatctcatg
aaagttaagagggagatctttcctgccgtcaggaagaacaaggagagagagaagcagaat
gaagcctacactgccatgctgaccagccacttgacaggagaagatggtgtctccaagaag
atagcagaccagatggacaacatcattgacatcagggagtatgacgtcccctaccatgtc
cgtgtgtccattgacttgaagatttttgtgggtcactggtactctgtgagggggagaggg
ggcgcgccccccgagatacggcagcgggaggatcttgttgaccgaccggatccagtggtg
tttgcgtacgacattgagacaacaaaactacccctgaagttccctgatgcccagatagac
cagattatgatgatatcctatatgatagatgggcagggctatttaatatgtaacagggag
atagtttctcaagacgtggaggacttcgagtacacaccgagacctgagtttgagggacct
ttcattgttttcaatgagccagatgaggtttcattgatcaagaaattctttgagcatttc
caggaagtacgaccccaaatctgtgtaacatacaacggagacttctttgattggccgttc
gtggaggcgcgggcagctgtccatgacatggatatgttccgggaaatcggcttccagaag
gacaatcaaggggaatacaagtccaggcactgcatacacatggactgcttcagatgggtg
aaacgagacagctacctgcctgttggaagtcagaatctgaaggctgttgccaaggcgaag
ttgcggtatgatccagtggagttggatccagaggagatgtgccggatggcgagcgaggaa
cctcaggtgttggcgaactactctgtttcggatgctgttgcgacatattacctctacgtc
aaatacgtccatcccttcatctttgccctgtgtaccatcatccccatggaacccgatgag
gtattgcggaagggctcggggacgctgtgtgaggcgctgctgatggtgcaagcctaccac
gctaacatcatcttccctaacaagcaggagtccgtgctgaacaagctgaccgaggatggc
cacgtgctggactccgagacgtacgtcggcggtcatgtggaggctctagagtcgggggtg
ttccgggctgacattccttgcagattcagaatggtgccggaagccttcaagactctcatt
gacagtgtagagcggacgatgaagcacgccatcgaggtggaggagaagataccccttgac
acagtcacaaactttgacgaggtgtgtagtgacgttgtggagaagttggagatgctacga
gactgccccaaccgtctggagaaccccatcatataccatcttgatgtgggggccatgtac
cctaacatcatcctcaccaacagactgcagccaccagccattgtggacgaggcaacatgt
gcagcttgcgacttcaacaagccaggagctctctgtcaacgcaagatgccttggatgtgg
agggcagagtttatgccggcgtcacggaatgagtttcatcgcattcagcaacagcttgag
aatgagaagttccccccgtacttccctgggggagaacccagagcattccaccaactgccg
aaagacgagcaagctgccattgagaagaaacgactggcagagtactgtcggaaggcatac
aagaagaccaagataacaagaatgcaagaacaaacagctaccatctgccagcgagaaaac
tccttctacgtcgacacagtgcgagctttccgtgatcgccggtacgagttcaagggcctg
accaaagtttggaagaagaagctgagcgaggccgagtccaagaaagatgctgcggagacg
aagagaagcaacggcatggtggtgctgtacgattctctgcagctggctcacaagtgcatc
ctcaactccttctatggctacgtcatgaggaagggagctcggtggtacagcatggagatg
gcgggtattgtctgcttcactggagccagcatcatcaagaaggccagagagattgtcgaa
caaattggacgcccactggagttggacacagatggaatctggtgtgttttgccagcaact
tttcctgagaattatgtcatcaagacaacgaatccaaagaaggccaaagttaccatttcc
taccctggcgccatgctgaatgtgatggtcaaggaccatttcaccaaccaccagtaccag
gagctggaggatcaaggctctctcaactactccctgcgcagcgagaactccatcttcttt
gaggtggatggaccatacctggccatgatcttgcctgcctcaaaagaggagggcaagaag
cttaagaagagatacgcagtgttcaactttgatggctcgctggctgagctaaaggggttt
gaagtcaagcgacgtggagagctgcagctgatcaagatcttccagtcgtccgtgttcgag
gcatttcttaaaggcattacacttgaggagtgttacgatgctgtggccaagattgcggac
tactggctggacgtgctgtacagcaaggcggctaacatgccagactccgagctgttcgaa
ctcatcgctgagaaccggagcatgtctcgtaaactggatgattatggcgagcagaagtca
acgtccatcagcacagcaaagagactagcagagtttctgggagaccagatggtcaaggac
gctggactggcctgtcggttcatcatcgccaagaaacctgagggtgcccccgtcactgag
agagctattcctttagccattttccaagctgaacctagtgtcaaaaaacacttcttgaga
aaatggttgaagaaagctgatatgtcccactttgatatacgagagatcctggactgggag
tactacatagagagactgggcggcaccattatgaagatcgtcaccatcccggcagcgctg
cagcaggtgccaaaccccgtgcctcgtattccacatccagtctggctacacaagaaacta
ctggaaaggaatgatgtgttcaaacagaagaaaatcagcgagatatttgcaccgatggcg
aaaaagacctcccagatggggatggaggaggactccgaggacattctatcgtcctcccag
aatggcataggggacatggaggacatcggaggacgtcctcccaggtcggggcttgccgtg
tcccacaagaggaaacggggcaactccgacacggacacaccaaacacacagctggactct
cagacgtctgacctgtcacagaactggagagatgtacttggtgctcctcctccaatgggc
agtacgaaggaggagaggaaggtgtggctagagtaccacaagaagaagtggcagatgcag
gccaaggagaagcaggagaggaagagacggagactggacttcgacaccccggccactgct
tccctgccggcccgggggctgggtgggttcctgcggcggacagcgcgcagcatgatggac
atgccgtggcaagttgtacagttgatggagaccagccttcctggtcagtacagactgtgg
gctgtcatcggtaacgacctccactccatcaagctcaacattcctcgcatcttctacgtc
aaccagaaaaatcccaaggatggggaaggagcgatgtggcggaaggttcagaagaccctg
ccacgatcacatcccgtatttcatctgtacgagtattctgtcccagaacatatgtacatg
gaacatacaaatgatatcaacgctgacctgtcgtccccagacatcgagggtgtgtacgag
acacaggttccccttctgttccgtgccttagttcaactcggctgtgtggtgactgtcaac
agagactttgccaaggttatggctggcagggaaacggacacatttgacctggacaactta
gagttccggacgctagcccagttctcgtaccttgaccccggcaccatcaagcacctgtac
atgtaccatcatgtgtgtgggaacaagatgatgtttggcttgtttttcccgggctcgaag
aaggggacgatctttgtggtggacaccgtgcgcagtgaccagatgcctaatgtcggagcg
ctctacaatgcggagaggaatgccaaagtgaccaaaggtgctgacgagacaactctccca
gaagcaggctacacatttgaggtgaagctggagaaagatgtccgccaggcccaccgagcc
atccagaggatgttgtccgcatacaaggatgagaaaagagggccaacattcatcgctatc
cagtctcctcttgatttctcccatttgacctctgtgatgcccggcttgtgtgacttcccc
ttagtgccaatccacataacggacagtgagaacctgtacaatgtcctggactggcagaga
gtcgggagtcgacgcttgctgcagcactacatgaatggcgagatcatcctacaggcaatg
atggaacagtgtcgctacctccatatccctatcggaaacatgccaagggacatcactcta
tttggctgtgatctgttcttcgcccgccacctacacaaacataaccacctgctgtggtgc
tcgccaaccgagaggccggaccttggcggcaaggaggccgacgacaacaggctgtgtatg
gagcttgaggagagctcatctgtggaggtaaacaacatcggctgctaccccacggtgtgt
gtggagcttgacatcgccagtctcgcagtcaacaccatcatcgagtctgcgcatgtcaac
gaccaggagggagcgagtgcggtcagcttcgacacgatgccacagacgtctctagaggac
atgatgcagggacagggagcagccaccatgctggcgagctatgacgagaccgcgctgtgc
tcctcaacattcaggattctgaagagtatggtccacagctgggtgagggaagtgacagcc
tatggcaacgtgttcgctgacaaccagatcattcacttctacagatggctacgttctcca
aatggcctgttgtacgacccggctctgagacgaaccctccacaacatgatgaagaaagtc
tttatgcagctgatagcagagttcaagcgactgggatcgcagatcgtgtacgctaatttc
aaccgcctactactatgtacgaagaagcgccgcctggtggacgctctggcatatgtggag
tacatcaccaacagtatcaagtctcgcgaactcttccacctcgtcgatatcacgtacgaa
cagtgttgggagtttctcatgtggcttgatccggccaatcatggtggggtgcgagggaag
ctgccgaccctcccaggggggaacaaaacacacaaagttgggggagaggacgacagtgat
gaggacttgcccgttgaggaggacgatggggaagagcttaacaagtcggacactgaggac
gagccggaaatcgagatgaactggaacattgtccacttcctccccgaggctgcagcatgc
cagactaacttcagcatgatagttgctggctacatcctgtccgtgtacaaccagatagac
gaggagcaacgtcgcctcaccccggggaacacccccatccgacgccgagacagcagccag
acacagaaacaccttgatccatcggccaccccgtcaactgtgtcgtttgcccaagatctt
gtccaaggggagcttgcacagcagatgtttgcaatcacccaaaagattcaaaagaaactt
gcaggaagcaagagtaaccaaggcaacctagcagcagaattcccacagttgcccggctcc
catctccccctcaacaacccctccctggaatttgtcaaggctgtgtgtaaggtgttggct
ctagacactaacgtcacaatccaggtcaccaagctgaagcgtgacctcctgaaactgatc
ggcgtgggggaattttcacctgctgctcagtttgccgacccttgtctctcctatgtgctg
ccagaggtgatctgtaaatcatgtaaccacatccgtgaccttgacctttgccgtgaccca
tacctcagtcaagatggtgcagggagtgtgtggtcgtgtgtgcagtgccgggcagagtac
gatgtggaggagatcgagcagagcctggtggatgcggtacatcggaagtccatggcctac
atcctccaggatctcaagtgtatcaagtgtaaaggggtgaaggagaacaacatgaagcgg
tactgctcctgtgcaggggactactccaacaccgtgtctctagctgacttcggcaaacag
ctcaagacattctcaggaatagccagccattacaagatgactctgctggctgaaacggtg
gagtggctgctgtccatgaacccggcaatagcagtgtctcgagtcaccagctag

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