Haliotis rufescens (red abalone): 124149402
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Entry
124149402 CDS
T07893
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03013
Nucleocytoplasmic transport
hrf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124149402
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124149402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124149402
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124149402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
Motif
Other DBs
NCBI-GeneID:
124149402
NCBI-ProteinID:
XP_046376905
LinkDB
All DBs
Position
Unknown
AA seq
1551 aa
AA seq
DB search
MATEGGGKIKPKRSHSTSKPYERRKSLLGKVTDTVKDLLAPSWLTDFVSTVSKKTPPKDK
KDALIEEEEDVFMSPAQSPSQLNNVKKPPRMQHQDCDRRNAVLAPRSAAATVAAPLDPAV
PSTSLAPPQPSFSSSHLPFSKFTQQKSRIPNDDTMSERSDVSRSTSGCSSMIPHPDKQAY
QREILQLNDSALDMLKTDFQTAEVFQPQKGGRAAQKDISAQKPQPIAPKMFDTFVNPPKT
WTAEASRQGRPLAPAVREKPGFNSSLFGSPVLNQSSSILGESFGESSFYSGRTTYGGASA
YRKLNSTAPYQTALPIRKQLKPKPLNSSFNAVTSSTARRILETLERMSTPLTDAKKIPAS
ESFLTDSVLSFTPGSYRRRTSRPLTGVGATRRSLDVPKGPPTSQLKTPSIASISKNRQKL
LSSTPTSSRIPEPKRKNRDQDSGEEDEDSSHEDEPVVIDDRPGGGGGKGGKMMREKSYRS
SARRRAGEDEEEEVEPPPPLKTDFTLPVMSMPAFNFKPTPGMSKKGKTVSLPSEDKAASL
KFTFSTPIQKSGPSAVTSSERAEGFTFSSPLKVTDKESLPKSSTFTAIGDSQPAFKPLMN
SSVTAPVCKLGNGGIGMNMKTAMSSGQAFKPAAGLKKGSVMDVLGGGAFKPSSDLKQGSV
MDVLGKDSTKSAGEASQLKSGSVMDILGKTSNDTSSPSGFKPALNLKQGSVMDILGKKGG
ETPPSSSPMTKFCKKPGEWDCDTCLVQNKPEATKCVACGTSKPGSGPKPPPPSGTGSLSS
GQPSLSSMFKSSAGSWDCDMCMIQNKPEDTKCVACKTPKPGAKTSGTGSLSSGQPSLASM
FKSSAGSWDCDMCMIQNKPEDTKCVACKTPKPGAKTSGTGSLSSGQPSLSSMFKSSAGSW
DCDMCMIQNKPEDTKCVACKTPKPGAKTSGTPETKTNSTIGASGFQISGSMFGSGTASSG
GGFGGFGKSALSTGGFSMGSTDSKNAGLEGGFKIGSGFSFGQPSTKGSDSKSASSDNEAK
DGSSSKGDSNSVSNVLSSQKTSSISGGFQFGTLDKKPVQESEGIVNSFKASTETQVSESK
SSGFGFGGSASEASKTSTTSEPSGTDSSNGKLAFGQKSDSTAEKKSDNIFGSGNSLSSAT
GFSFGQSGATSIASPGGFSFGATAATTTATANTTSTGIMSSGFSFGQDKTDSKAVFGTMP
ATTTEASKPVAATNNSLFAFGQPVAGGNTDNNKPLGVGGGFPFTANTDTSTAAAAPKRGR
DEESGAPAAKKSFSFGQSTNSTSTGGFNFGASASVTSASGVFNFGVNSTSSASTAAGTTT
STPSFSFGAAQPAPTASTPFQFSAQTASSGTNSVFQFGNSSAGSQTGFAFGSSAPATTTA
PFGTTNTLPQPAFGNTANSTPQTGAQGGGMFSNSTSVFGANNSATPVPAFGAADQNANSG
GFSFKMAGPNNQSSSTLNSQPSFNFGGAGSGGVFQFTAKGNETSAGAPAQGSTSSGFSFG
STQQPQPAAPAPTFNSTNAMSFTGGNTPSFTIGSTPDTGRKIKRAVRKIRK
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaagggggtggcaagattaaacctaaacgcagccactcgacttcaaagcca
tacgaaagacgaaagtcgctcctgggtaaggtgacggatactgtgaaagatttgcttgct
ccatcatggttgacagattttgtatccactgtttccaagaagactcctcccaaagacaag
aaggatgctctcatagaagaagaggaagatgtgtttatgagccctgctcagtcaccatca
cagttgaacaatgtgaagaaacctcctcgcatgcagcaccaggactgtgacaggcgcaat
gcagtgcttgcaccccggtctgcagcggccacagttgccgctcccctggaccctgccgtc
ccgtcaacatccctggcgccacctcagccatcattcagctcatcacatctgcctttctcc
aagtttacccagcaaaaatccagaatcccaaatgatgacactatgtctgaacgaagtgat
gtgtctcgatcgacgagcgggtgttcctccatgatcccccacccagacaagcaggcctac
cagagggaaatactgcagctgaatgattctgctctagacatgttgaaaacagactttcaa
acagctgaagtttttcagccacaaaaaggtggtcgtgctgcacagaaagatatttcagca
cagaagcctcagcctatagcccctaagatgtttgacacatttgtaaatccaccaaagaca
tggactgcagaggcgtcgcgtcaagggcgtcccctggccccagctgtgcgggagaaaccc
ggcttcaactcttcactgttcgggtcccctgttctgaaccagtcctcgtccatattgggt
gaaagttttggggagtcatccttctattctggcaggacgacgtatggaggtgcatctgct
tacagaaaacttaactctacagctccctaccagactgcactgccaattcgtaaacaactg
aaaccgaagcctctcaacagcagttttaatgcagtgaccagttccacggccagacggatc
ctggagacactggagcggatgtctacacccctcacagatgcaaaaaagatccctgctagt
gaatctttcctgactgattctgtgttgtcattcacgcctggcagttacagaaggcgaacc
tcacgtccactcactggtgttggagcaaccaggaggtcactcgatgttccgaagggcccc
cctacaagtcagctgaagactccttccatcgcgtctatatccaagaatcgccagaagctc
ctatcctccacaccgacatcgtcacggataccggaacccaagagaaagaaccgcgaccag
gacagtggtgaagaagacgaggacagcagtcatgaagatgagccagttgtgatagatgac
cgacctggaggcggaggggggaaagggggcaagatgatgcgggaaaagagttatcgttcc
tccgcgagacggagagcaggagaagacgaggaggaagaggtggagcctcctcctcccctc
aagacagacttcactctgcctgtgatgagtatgcctgcattcaacttcaagcctacacca
ggcatgtcgaagaaagggaaaactgtgtccctacctagcgaggacaaggctgccagcctt
aagttcacattctcaaccccgatacagaagagtgggccttccgcagtgacgagttctgaa
agggcagagggcttcacctttagttcccccctcaaggtcactgacaaagagtccttgcct
aagtcatctacattcacagccattggtgatagtcaaccagcttttaaaccattaatgaat
tcctcggttactgcacctgtctgcaagctgggaaatggaggtattgggatgaacatgaag
acagcaatgagcagtggacaggcttttaagcctgctgcaggtctgaagaaggggagtgtg
atggacgtgttgggcggaggtgccttcaagccctccagtgacctgaaacaagggagtgtg
atggatgttcttgggaaagatagtaccaagtctgctggagaagcaagccagttgaagtct
ggcagtgttatggacattctagggaaaacttccaatgatacaagttcaccgtcagggttt
aagcctgcattgaacctgaagcaagggagtgtcatggacatcctaggcaagaagggaggt
gagactccgccttcaagtagtcctatgaccaagttctgtaaaaagccaggggaatgggat
tgcgacacctgtcttgtacagaataaacctgaggcaactaaatgtgttgcctgtgggacg
tccaagccagggtcgggtccgaaaccccctcctccgtcagggactggatctctgagttcc
ggtcagccaagtctgtcctccatgttcaagtcgtccgcaggaagttgggactgtgacatg
tgcatgattcagaacaagccagaagacaccaaatgtgtggcctgtaaaactcccaaacct
ggagccaagacatcaggcactggatctctgagttccggtcagccaagtctggcctccatg
ttcaagtcgtccgcaggaagttgggactgtgacatgtgcatgatacagaacaagccagaa
gacactaagtgtgtggcctgtaaaactcccaaacctggagccaagacatcagggactgga
tctctgagttccggtcagccaagtctgtcctccatgttcaagtcctccgcaggaagttgg
gactgtgacatgtgcatgattcagaacaagccagaagacaccaagtgtgtggcctgtaaa
actcccaaacctggagccaagacatcagggacaccggagacgaagacaaacagtacaatc
ggtgcatctggattccaaatcagtggatctatgttcggcagtggaacagcttctagtgga
ggagggtttggtggttttggaaagtcagccttatccactggaggcttcagcatgggatct
acagattcaaagaatgctggcttggaaggtggatttaagattggttctggttttagtttt
ggacagccttccactaaggggagtgactcaaaatctgcatctagtgacaatgaagcaaaa
gatggaagttctagtaaaggtgattctaatagtgtatcaaatgtacttagctctcaaaag
acttctagtatatctggtggctttcaatttggaactctcgataagaagccagttcaagaa
tcggaaggcattgtgaacagtttcaaagccagcacagagacccaagtgtcggaatctaaa
tcgtctgggtttggatttggtgggtctgcttctgaggccagtaaaacaagtactactagt
gaacctagtggaacggactcgtccaatgggaaattagcctttggacaaaaatcagactct
actgcagagaaaaagagtgacaatatatttggttctggcaattctctgagcagtgccaca
ggttttagttttggtcagagtggtgccacatcaattgcttcacctggaggattctcattt
ggagcaacggcagccacgacaactgctacagctaacacaacatctacaggcattatgtcc
agtgggttttccttcggacaagacaagaccgacagtaaggctgtgtttggcaccatgcca
gctaccactacggaagccagcaagcctgttgctgcaaccaacaactccctgttcgcattc
ggtcaaccagtcgccggcggcaacacagacaacaacaaacctctgggagtgggtggggga
ttccccttcactgccaacacagacacatcaacagcagcagctgccccgaagcgaggacgg
gatgaggagtcaggagcacctgcagccaagaagtccttctcgttcgggcagtccacaaac
tctacctcaacaggtggcttcaactttggtgcatcggcatctgtgacatctgcaagtggc
gtcttcaactttggtgtcaactccaccagcagcgcatcgactgcggcagggacgacgact
tcaaccccatcattctcattcggagctgcccagccagcacctactgcaagcacacctttc
cagttctccgctcaaacagcatcctccggaaccaactcagtattccagttcgggaacagc
tccgctggatcacagacagggtttgcattcggttcctccgccccagcaacaactacggca
ccgtttggcaccaccaacacccttcctcagccagcgttcggcaacaccgccaacagcacc
cctcagaccggagcccagggcggggggatgttcagcaactccacgtcggtgtttggagcc
aacaacagtgccacaccagtgcctgcgtttggagctgcagatcagaatgccaactcagga
ggcttctcattcaagatggcaggcccaaacaaccaaagttccagcactctcaactctcaa
cccagcttcaacttcgggggagcaggaagtggaggagtgttccagttcaccgctaaaggg
aatgagacttcagccggtgcaccagcccagggatccacgtcatcagggttttccttcggt
agtacccagcagccccagccggcagcccctgccccaaccttcaactccaccaacgccatg
agcttcacaggcggcaacactcccagcttcaccatcgggagcactccagatacggggaga
aaaatcaaacgtgcagtacggaaaatcaggaaataa
DBGET
integrated database retrieval system
