Haliotis rufescens (red abalone): 124149866
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Entry
124149866 CDS
T07893
Name
(RefSeq) retinoic acid receptor RXR-alpha-A-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrf03000
]
124149866
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hrf03310
]
124149866
Transcription factors [BR:
hrf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124149866
Nuclear receptors [BR:
hrf03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
124149866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124149866
NCBI-ProteinID:
XP_046377647
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MNHNMGTHPIVSDTSQGSSNHAIQSTVSTMPNQAAYLAAAFNNAADSYNGQFAVFDSKPS
YVPHISKETHFKTDRKNAVWDIAGYAQLYDVHCGMYSVTSPTNLSPSPPPPPRIYKPCVV
CNDKSSGYHYGVSSCEGCKGFFRRSVQKNMQYTCHKDKNCPINKVTRNRCQYCRLQKCFA
AGMSKEAVRNDRNKKRKVKPECTSSPNEDLTGDDQNLIQDILDAHRATFISDMEDSPESP
SLKPREEEDSVILWERISELSSDGIVKIVDFAKKLPGFSTLSQSDQITLLKAACLEIMIL
RLSARYDAALDSMVFMNGVTLNKDQLQQGGFGNLTGTIFSFAASLKAMSTDETEFAILSA
ICLISGDRSGLQDTEKIEQMQEPLLEALKHYTRSRRQEQPHIFAKLLMKLTDLRSISVKG
EKQTLRFALDHLANALSLLEAPASSQPIIKKEPLSDDEPSSSRKPSSTTFMRSNVGGQNV
PQYQGTVHTNINLMAMNPSSVRSPEFMGSRLPSPRMGPLPDSSIPSPLGMGMSPRQLSPN
QTVSVGGMGSMGTPSPPFPSVTSPNMPNYLTGLSPTLSPISFSSSSYISSMMSSPVASNN
VSSSVDENIMSNIHNSISDGMQSMVPNMETQQFGLTQNLNRAQIDEILRSSHLLGQQAGN
NITDLETMKHSYNPGRNNTNNNTNGNGIMPTGLYRSDVNGTQLVLNDVGPSTDHHAPLSK
IIAGAMTDSMQI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaaccataacatggggacccacccaatcgtcagtgatacatcgcaggggtcctcaaac
catgctatacagtccacagtgagcaccatgcccaaccaagctgcctacctcgccgccgcc
ttcaacaatgccgctgactcatacaatggccagtttgctgtcttcgattctaaaccgtcc
tacgtacctcatatatccaaagagacccacttcaaaactgaccggaaaaacgctgtctgg
gatattgctggctatgctcaactgtatgatgttcactgtggaatgtattcggtgacgagt
cccacaaacctgtccccctctcctccccctcctcctcggatctacaagccttgtgttgtc
tgtaatgacaagtcctccggctaccattatggcgtcagctcctgtgaaggatgcaagggc
ttctttcgtcgcagtgtccaaaagaatatgcaatatacttgtcacaaggacaagaactgc
ccgatcaacaaggtgacccgcaacagatgccagtactgtcgtttgcagaaatgttttgct
gcaggaatgtcaaaagaagctgttcgcaatgatcggaacaagaagcgcaaagtcaaacca
gagtgcaccagcagtcccaatgaggacttgaccggcgatgaccagaatcttatacaggat
attctggacgctcacagagcaacattcatatcggacatggaggatagtccggaatcgcca
tccttgaaaccacgtgaagaggaggacagtgttatattatgggagagaattagtgaatta
tcctcagatggtattgtgaaaattgtggactttgccaagaaactccctggcttctcaaca
ctttcacagtcggatcaaattacattactaaaggcagcatgtttagaaattatgatattg
cgactgagcgcacgttatgatgcagccctcgactccatggtgttcatgaatggggtgacg
ttaaacaaggatcagctacagcaaggagggtttggcaatctcacagggactatcttcagc
tttgctgcttcacttaaagctatgagcacagatgaaacagagtttgcaatcctgtcagcc
atatgcttgatcagcggagatcgctcagggttacaagatacagagaaaattgagcagatg
caagagccattactggaggcattgaagcattacactcgctctcggaggcaggaacagccg
catatattcgccaaactcctcatgaagctaactgatctccgaagtataagtgttaaaggt
gaaaagcagacacttcgtttcgcgctagaccacttggctaatgccctctctctcctggag
gcacctgcctctagccagcccattatcaagaaagaacccctctcagatgatgaacccagc
tccagtagaaaaccttcatctaccacattcatgcggagtaatgtcggaggccaaaatgtg
cctcagtatcaagggactgtacacacaaacattaaccttatggccatgaaccccagcagc
gtaaggtcacctgagttcatggggtcaaggttaccgtccccacgaatgggaccgctgcca
gattcgtccattccctcacccctggggatggggatgtcgcccaggcagctcagtccgaat
cagacagtatcagtgggaggaatgggatcgatgggcactccctccccgcccttcccctcc
gtcacatcccccaacatgcccaactacctcactggtctgtcgccaactctgtctcctatc
tccttttcatcgtcgtcatatataagctccatgatgtcatcgccagtcgcctccaacaac
gtgtcatcgagcgtggatgaaaacattatgtccaacattcataactctatatctgacggg
atgcagtccatggtgccaaatatggaaactcagcagtttggtttgacgcaaaacctcaat
agggcacagattgatgagattttacgcagcagtcacttgttagggcagcaagcagggaac
aatatcaccgacttggagacaatgaaacattcttacaacccaggccggaacaataccaat
aataacaccaatggtaatggaattatgccaacagggttataccgaagtgatgtaaatgga
actcagcttgttttgaatgacgtcggccccagcacagaccatcatgctcctctcagcaaa
attattgctggagctatgactgattccatgcaaatttga
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