Haliotis rufescens (red abalone): 124150233
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Entry
124150233 CDS
T07893
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124150233
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124150233
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124150233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
AAA_22
HA2_N
Rad17
AAA_25
AAA_7
ResIII
Motif
Other DBs
NCBI-GeneID:
124150233
NCBI-ProteinID:
XP_048248378
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MTTSDDLSDSDSFLSKEKSSGHKNKRKHSKHKKSKRKHHERDRERERSPEYHDRHLSHTR
HRSSDEDKTYIDKSSRYRDGHPKDSRERDVDGSSRYRDVIPSASSRYRDKHHHDHEKPSP
KCRQSVVELEKTRNISADKNSDVKSERVYETKYKDKDHHCKKTSLNSDSEEEQQDSDFDF
TQHKPSLNRIFFRDQDFIKRGTKEYDDFWAFLVKYQAFQRKKAAKKQSKSKTSTRQEDEG
RLGLPRTYDNRYRINLSLVSKDVELFLKKGRLVDYDVGRDLTRERVTKFKGILLHYLDFQ
QKQKFTKLKKIRADQENLPIFQYKTMICGMVKRHQVVVVAGDTGCGKSTQVPQYLMEAGF
ENIACTQPRRIACISLSKRVGYETLNEYGSAVAFQVRFEKSKTRATKILFLTEGLLLRQM
TSDPYLKQYDVIVIDEVHERHIFTDFLLGVLKCMLTQREDLKLVLMSATINIELFSGYFE
NAPVIRVPGRLHPIELEYQPIKRDEMTSRGEKLDPTPYLRIMQTIDHRYPVTERGDLLIF
LSGMTEIMTIVEAANQYAQQTKRWIILPLHSALSVQEQDKVFDVSPEGVRKCIVSTNIAE
TSVTIDGVRFIVDSGKVKEMNFDPKYKMRRLQEFWISQASAEQRKGRAGRTGPGVCYRLY
ADTDYNSFQEYATPEIQRVTLDTLILQMMSLGLPDARRFPFIEAPEMSSIETSIAFLKEQ
GALTDDEALTPTGQMLSRLPVDVVIGKMLIMGSIFHMIDPVLTIAAAMSVQSPFTMKAHQ
DRDAIAARKPLESDHGDPFTLLNAADEWIQVKAEGRGTRKWCQRRGLEEQRFYEMNKLKR
QFRDLLKDHGLLDDVQEEERYYTSEERRQRHGERKRLGQLKREQNNESKKRKVLKFTEDD
YQLSDGDEDDKGNDIKDLEFRLSHDLSQLQETANKTRCFKLRDVNLLKVILCSGLYPQVA
LADDCNSYKGDSEQAFHTKNKAFILLHPTSVFASKPEVLRPSDIKDNKTTPSELRGRLSS
KHEVLAFVSILETNKPYLINTMRVPALQTITLFSNSIDANADCTRLVCDGWLEIRFPDAE
SADGVISSILHLRATWLNLLQVRLADTMSQMDDDHKKVGNKARRLEQLLARKLAEFLDSR
VTYSIRRVMAAEQQHLYVGMSTDSQDNKEHSVKGGTQVNSYLTVGCLLDDTSASVWGEYT
SHMQKVWECPRCHVSLIVSVVERLQHQMECQSADKPLSKDEEAAERESERATQLNPLRRS
YFCPDCDQQLSLTATEILKHKKSHKE
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaagcgacgatctcagtgattccgattcctttctgtctaaagaaaaatcttcc
ggccacaaaaataaacgtaaacatagtaaacacaagaagtcaaaacgtaaacaccacgaa
cgtgacagggaaagggagcgtagcccggagtaccacgaccgtcatttatctcatacaaga
catcgatcttcggatgaagacaagacgtacattgacaaaagcagcagatacagagatggg
catccgaaagatagcagagagcgagatgtcgacggtagcagtagatacagagatgtgatt
cccagtgctagcagtagatacagagataagcatcatcatgatcatgagaagccttcccca
aaatgtaggcaaagtgttgttgaacttgaaaaaacaaggaatatttctgcagacaaaaac
agtgatgttaaaagtgaaagggtgtatgagacaaagtataaagacaaagatcatcactgt
aaaaaaacttcattaaattctgactctgaagaagagcagcaggactctgactttgatttc
actcagcataaaccatctttgaacagaatatttttccgagatcaggactttataaaaaga
ggaactaaagagtatgatgatttttgggcattcctggtcaaatatcaagcattccaacgg
aagaaggcagccaagaaacagtctaagagtaaaacatccaccagacaggaagacgaggga
aggcttggcctgccacgaacgtacgacaaccgttaccgcatcaacctgtcactggtcagc
aaagatgtggaacttttcctcaagaaggggcgacttgtcgactacgatgtgggtcgagac
ctgacccgggagagagtgaccaagttcaagggcatcctgcttcactacctggacttccaa
cagaaacagaagtttaccaagttgaagaagatccgtgcagaccaggagaacttgcccatc
ttccagtacaagaccatgatctgtggtatggtgaagcgccatcaagtggtggttgtcgcc
ggggatacagggtgtggcaaatccacacaggtgccgcagtatctgatggaggcagggttc
gagaacatcgcctgcacacagccgcggaggatcgcctgcatctctctgtcaaagcgagtt
ggctatgagaccctcaacgagtatggctcggctgtagccttccaggtgcgctttgagaaa
agcaaaacaagagccactaaaatcctcttcctgacagaaggactgctgctgagacagatg
acatctgatccttatctgaaacagtatgatgtcattgtgattgacgaggttcacgagcgt
cacatcttcacggacttcctgcttggtgtgctcaagtgcatgctgacacagagagaggac
ctcaagcttgtgctcatgtctgccaccatcaacatcgagctcttcagcggctacttcgag
aatgccccagtcatacgggtcccggggcgtcttcatcctattgagttagagtaccagcca
attaaacgtgacgagatgacgagtcgtggcgagaagttggatccgaccccatacctccgc
ataatgcagacaattgaccaccggtacccagtcacagagcgaggtgatctgctgatattt
ttgagtgggatgacagagattatgactattgtggaggcagccaatcagtacgctcaacag
accaagagatggatcatcctgcccctccacagtgctctgtcagtccaggagcaggataag
gtgtttgacgtatctcccgagggagtgagaaagtgcatcgtatctacgaatatcgcagag
acgtcggtgaccattgacggtgtccggttcattgtagactcaggcaaggtcaaggaaatg
aattttgaccccaagtataagatgcggcgtcttcaggagttctggatcagtcaagctagt
gcggaacagaggaagggtcgagcaggtaggaccggcccgggggtgtgctaccgcctgtat
gccgacactgactacaactccttccaggagtatgccacgcctgagatacagcgcgtcacg
ctggataccctcatcctccagatgatgtcccttggattacccgatgcaaggagattccct
tttattgaggctccagagatgtcaagcattgagacttccatagctttcctcaaggagcag
ggggctctgactgacgatgaggctttgactcctactggacagatgttatcgcggctacca
gtggacgttgtcatcggcaagatgctcatcatgggctccatcttccatatgatagaccca
gtgctgacgatcgcggctgccatgagcgtacagtctccgttcactatgaaggcccaccaa
gacagagatgctattgcagcccggaagcccctggagtcggatcacggagaccccttcaca
ctgctcaatgccgcagatgaatggatacaggtgaaggctgagggccgaggaacccggaaa
tggtgtcagagacgcggtcttgaggaacagaggttctatgagatgaacaaactcaagcga
cagttcagagacctcctgaaggaccatgggctgttggatgacgttcaggaggaggaacgc
tactacaccagcgaggaacgccgtcagcgccacggagagaggaagcgccttgggcagctg
aagagagaacagaacaatgagtccaagaagaggaaagtacttaagttcactgaggatgac
taccagctgagtgatggcgacgaagatgacaaggggaacgacatcaaggatctggaattc
cgactgtcacatgaccttagtcagctacaggagactgccaacaagactcggtgtttcaag
ctgcgtgatgtcaacttgctcaaggtcatcctgtgcagcgggctgtacccacaggtggcg
ctggctgatgactgcaactcctacaagggcgactctgagcaggccttccatacaaagaac
aaggctttcatcctcctgcatcccacaagtgtgttcgccagcaagccagaggtgcttcgt
cccagtgacatcaaggacaacaagaccacgcccagtgagctgagggggcgactcagcagc
aaacacgaggtcctggcgtttgtttctatcctggagaccaacaagccttacctcatcaac
acaatgcgggtcccagcactgcaaactatcaccctcttctccaactccattgatgccaat
gccgactgcaccaggctggtgtgtgatggctggctggagatccggttccctgacgccgag
tctgctgatggtgtcatatccagcatcctacatctccgggccacctggctgaacctgctt
caagtccgcctggccgataccatgagtcagatggatgacgaccataagaaggtcggcaac
aaagcccggcgcctggagcagctccttgcacgcaaactggccgagttcctggacagtcga
gtcacctactccatacgtcgggtgatggcggccgaacagcagcacctgtatgtaggcatg
agtacagacagtcaagataataaggaacattcagttaaaggaggaacacaagtcaattct
tatttaacagttggctgcctgcttgatgatacctcggccagcgtgtggggggaatacacg
tcacacatgcagaaggtctgggaatgcccacgatgtcatgtcagcctgattgtgtcagtg
gtagaacggctgcagcatcagatggagtgtcagagtgctgataagcctttgtctaaagat
gaggaggctgcagagcgtgaatcagaacgagccacacaactcaaccctctgagaagatcc
tacttttgccccgactgtgaccaacagctttctttgactgcaacagagattctcaaacac
aagaaatctcacaaagaatga
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