Haliotis rufescens (red abalone): 124150863
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Entry
124150863 CDS
T07893
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124150863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124150863
03009 Ribosome biogenesis [BR:
hrf03009
]
124150863
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124150863
Spliceosome [BR:
hrf03041
]
Complex A
U1 snRNP components
U1 related factors
124150863
Complex B
124150863
Ribosome biogenesis [BR:
hrf03009
]
Eukaryotic type
Pre-60S particles
Helicases
124150863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124150863
NCBI-ProteinID:
XP_046378973
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MTSVLTGSLLRHLVRAQSLRKAAPPLVGRSVSTGMSYRDRMFDSSGRSDRKGFGGRDGGR
GGGSRFGGRDGGRGGGGFDRYGSGGGMGRGGGRPSLKGIQPGERLRKPRWDMERLPKIEK
NFYREHPNVVNRSPEEIQAFYNENQITIRGRDVPKAILAFEEANIPDYVMHQIRRNNWQK
PTPIQSMGWPVALSGRDCVGIAQTGSGKTLGFILPAIIHITNQPYLEPGDGPICLVLVPT
RELAQQVQEVAIEFGHASKVRNCCVYGGAPKGPQIRDLERGAEICIATPGRLIDFLEAGK
TNLRRTTYMVLDEADRMLDMGFEPQIRKIIEQVRPDRQTLMWSATWPKEVRKLAEDFLKD
YCQVNIGALQLSANHNILQIIDVCQEYEKENKLVKLLEGIMQERDNKTLIFMETKRKCDD
LSRRMKRDGWPVMAIHGDKSQQERDWVLNEFRTGKTPLLIATDVASRGLDVEDIKFVINF
DYPACSEDYVHRIGRTGRSNNTGTAYTFFTPSNSKQVNDLVSVLREANQNINPKLLQLAE
SNRGSMGKGRSRWKGRDDRSGRDSRGSYRDHDSYGSRDGNRGRGGSSYGGSSYGGSSYGG
GSMGSGSMGSGSSSSGFGQASRDSSSGSRGGGYSSGSSRGGFSQRTDSRFSGQSQTGQAP
KNNFNQGASRGGMAPKPQSVVQQPQYGQPRQPQMNGYGGAGAAAAATPAVPPKPPQSQQQ
PQQGGPGKMQDLQNMAFMYSQWMQHSTGAPPPPPSGPVAPPPPPPPGY
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagtgttgaccggctcactacttcgccatcttgtcagagcgcaatcattaaga
aaagcagccccaccactagtaggtcgcagtgtttcaacgggcatgtcatacagagataga
atgttcgactcatcaggtagatcagacagaaaagggttcggtgggagagatggtggtcga
ggtggaggatctcgttttggagggagagatggtggtcgaggtggaggaggatttgacaga
tatggatctggtggtggtatgggtcgaggtggtggcaggccatccctcaagggcatacaa
cctggagaaagactgaggaaacccagatgggatatggagaggcttcccaagattgaaaag
aatttctacagggaacatccaaatgtagtgaatcgatcacccgaagaaattcaggcattc
tacaatgagaaccagattacaattaggggacgagatgtaccaaaggcaatccttgccttt
gaagaggcaaacattccagactatgttatgcatcaaatcagaagaaacaactggcaaaaa
ccaacaccaattcagagtatgggttggcctgttgcactttcaggcagagactgtgttgga
attgcacagacaggatcaggcaagactcttgggtttatcctgccagctatcatccacata
acaaatcaaccctacctcgaacctggagatggaccaatttgtttggtgctggttccaaca
agagagttagcccagcaggttcaagaagtagccattgaatttggccatgcatccaaggtt
cgcaactgctgtgtgtatggcggtgctccaaagggaccacagatcagagatctagaaaga
ggagctgaaatctgcattgcaacacctggaagattgattgacttccttgaagctggaaag
actaacctcagacgaacaacatacatggttcttgatgaagcagacagaatgttggacatg
ggttttgagccccagatcagaaaaatcattgaacaagttcgaccagacagacaaacactc
atgtggagtgccacatggcccaaagaagtgcgaaaactggcagaggacttcctcaaggac
tactgtcaagttaatataggagctttgcagcttagtgctaatcacaacatccttcagata
attgatgtgtgccaagagtatgagaaggagaataaacttgtgaaactccttgaaggcatc
atgcaggagcgagacaacaagacactgatattcatggagactaagaggaaatgtgatgac
ttgtctcgacggatgaagagggatggttggcctgtcatggcaatccatggagataaatct
caacaagagagagactgggttctgaacgaattcagaactggaaagacaccactcctcatt
gccacagatgttgcctcccgtggcttagatgtggaagacattaaatttgtgataaacttt
gactaccctgcctgctctgaggactatgtgcatcgcattggccggacaggccgcagcaac
aacactggcactgcctacacattcttcacacctagcaatagcaagcaggtgaacgacctg
gtctccgtgctccgggaagccaaccagaacatcaaccctaaactacttcagttggccgag
tcaaaccgagggagcatgggcaaaggtcgaagcaggtggaagggtagagatgacaggagt
ggtcgtgacagccgtggaagctacagagatcatgatagctatggtagtcgtgatggtaac
agaggacgtgggggttcaagttatggcggttcaagttatgggggatcaagttacgggggt
ggcagtatggggagtggtagcatggggagtggtagcagttcgagtgggtttggtcaggca
tcgcgcgatagttcaagtgggtccaggggaggaggatattcaagtggttcaagtaggggt
gggttcagtcaaagaactgacagcaggttttcaggtcaaagccaaactggacaggcacca
aagaacaatttcaaccaaggggcttcaagggggggaatggcgcccaaaccacagtctgta
gtgcagcagcctcaatatggacaaccgaggcagccacaaatgaatggttatggtggagct
ggtgctgcagcagctgcaacaccagcagtaccacctaaacctccacagtcacagcaacag
ccacaacagggaggaccagggaagatgcaggatttgcagaacatggcctttatgtatagc
cagtggatgcagcattccactggtgcaccaccacctcccccatctggccctgtggcaccc
cctccccctcccccacctggctactag
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