Haliotis rufescens (red abalone): 124150890
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Entry
124150890 CDS
T07893
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124150890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124150890
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124150890
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124150890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124150890
NCBI-ProteinID:
XP_046379033
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MADRRKLQGEIDRCLKKVSEGVEVFEDIWKKVQQATNSNQKEKYETDLKREIKKLQRLRD
QIKSWVANSDIKDKSTLLDHRKLIETQMERFKVVERETKTKAYSKEGLGAAAKLDPQTKE
KGEITNWLSHMIDNLNVQLDQFESELETLTCTSKRKKTEHEKLDELKSWQDRHKVHIQKL
EMVMRMVDNDAITPDQIKKIKDDVEYYVESNQEPDFEENMFVYDDLDLEEIGENGALQPS
SPPENEDAEKLMTMAMSTPTSTNSSSPSPSPSVNHSTGSAQSEVCVFQDKSEEVERKRHK
SQPDEKLRSNQSLTPTITMSNKQTTPSKQTTQSNPHSQNSDSSSSNHHPTTPTPPLTAYA
AAASSQNSAPGTPIPRLSHSIPSVWGQRNASAHSSFLQDAKPTGNSLDHVAAASSATTNG
TPNSVSTSVNSVSVLNSSGNPSVPSAPSPLMSGAAAPSPIGSTNSTASSTTLILSQSQLK
TDAPLAMNGPLTVVRPSLQSRELMSSLKSMAQQAIVEAGLESQIPTSHVTTDSKGVFLSS
TVQAPPSQPTAPSPEQTIPSQQSQSVPTSTAQQPSVQQQQQAPQTTTIHLNPLLGVAPLG
PMPLSKEHYYQLSMLEAAFHHLPHPSDSERLRHYLPRNPCPTPSYYPQVPPPHADSVEFF
QRLSTETLFFIFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITEDYEQGT
YIYFDYEKWGQRKKEGFTFEYRYLEDRDLN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaggcgaaagcttcaaggtgaaattgacagatgccttaagaaagttagtgaa
ggtgttgaagtatttgaagacatatggaaaaaggtacaacaagcaactaatagcaaccag
aaggagaaatatgaaactgatctgaaaagagaaatcaagaagttacagcgattgcgtgat
cagatcaaatcatgggttgccaacagcgacatcaaagacaagtccactctgttggaccac
agaaaactcatagagacgcaaatggaaagattcaaggtggttgagcgagaaacaaagacg
aaagcttattcaaaggagggtcttggggctgctgcaaagcttgacccacaaacaaaagag
aaaggagaaatcacaaactggttatcgcacatgattgataatctcaatgtccagcttgat
cagtttgaaagtgaactggagacattaacgtgcacatccaagagaaagaaaactgagcat
gagaaactggatgagttgaagagctggcaagacagacacaaagtccacattcaaaagctg
gagatggtcatgaggatggtggataatgatgccataacaccagaccagataaagaagatc
aaagacgatgttgagtattatgtagaatccaaccaagaaccagactttgaagaaaatatg
tttgtgtatgatgacctagatctggaggagataggtgagaatggtgcactacagccatca
tcaccccctgaaaacgaggatgcagagaaactgatgacaatggcaatgagcacgccgaca
tcaacaaactcaagttccccttcacctagtccaagtgtcaaccattccacagggagtgcg
caatcagaggtgtgtgtttttcaggacaagtctgaagaagttgagaggaagaggcataaa
tcacagccagatgagaagctgcgaagcaatcagtcattgacaccaacaataacaatgagt
aacaaacagaccacgccttcaaaacagacaactcaaagcaacccccattctcaaaattct
gacagtagttctagcaatcaccatcccacgactccaacccctcctctcacagcatacgca
gcggctgccagcagtcagaacagtgcaccgggtactcccattccacggctctcccattcc
atcccttctgtgtgggggcagcgaaatgcctctgctcacagtagcttcctccaggatgct
aagcccacaggcaactctttagaccatgtggcagcggcaagcagtgcaacaacaaatggt
acccctaactctgtatcaaccagtgtcaactctgtctctgtgttaaactcatcgggaaat
ccgtctgtaccatcagcaccgtcaccgttaatgagtggcgctgcagcaccttcacccata
ggctccaccaactctacagcatcatcaacaacattaatcttgtcacagtcacaacttaag
actgatgctccgttggcaatgaatggtccccttactgttgttcggccatcattacagagt
cgtgaattgatgtcttcattaaaatcaatggcacagcaagcaattgttgaagcaggttta
gagagtcagataccaacatctcatgtcacaacagatagcaaaggtgtgtttctcagctcc
acagtacaagcccctccttcacagcccaccgctccatcacctgaacagaccatccccagt
cagcagtcacagtcggtgccgacatccacagcacaacagccatcggtccaacaacagcaa
caggcaccgcagaccactaccatccacttaaatccattgttaggtgtagcacctcttgga
cccatgccactcagcaaagaacattattatcagctttctatgttagaagctgcttttcat
catttgcctcatccttcagactctgaaagattaaggcactacttgccaaggaatccatgt
cctacaccttcgtactatccccaagtcccccctccccatgctgactccgtagaattcttc
caaagattgtcaacagaaacactattctttatcttttactacatggagggtactaaggct
caatacctggcagcaaaagcattgaaaaagcaatcttggaggttccatacaaaatacatg
atgtggttccagagacatgaagaaccaaaaactattacagaagactatgaacagggcaca
tatatctactttgattatgagaagtggggccaaaggaaaaaggaaggttttactttcgaa
tatcggtatcttgaagaccgagacttgaactaa
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