Haliotis rufescens (red abalone): 124151027
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Entry
124151027 CDS
T07893
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrf03036
]
124151027
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124151027
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124151027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
124151027
NCBI-ProteinID:
XP_048251818
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MMDSIFLSSNISQSDGLSTQKRKWSGIPEPPTDIDAGILSSSFFSELPLSEVFHLSQSQK
KSRSPLIFQSQEKENVFLQIMPQSQRSFKNQLPRCNTFKTPQKQVFNPVYQREADVDNLS
FLDYGTPSLSITPTYKGLSAADKAPHSSVTHRKLEWNDWNLQKYADPSDIPEIDPEDDQT
PSQLTPPKRRCFQFSQAINSSFQPDKTVVPSFSCPSVNGDRKLVHDFSRTFPQKDKGSSF
STPCIPSRRRSDPSDSGFCEPRSQVDSLNTPASIIVPNTDNGQTRLRSVEEIPASFREVF
DFPYFNMVQSMVLDDVLYTDKPLVVSAPTGAGKTVIFELAIIRLLNKFVEIKKNWKIVYV
APVKALCSERYLDWKRKFQPHGLSCMELTGDTEMDELPGLHTANLIVTTPEKWDSMSRKW
KDNRSLFQMISLFLIDEIHILNDSTRGSTVEAVVSRMKTLRLTDRATDGPLMRFVGVSAT
IPNIEDIATWLGNPQNPASSFKLGEKYRPVRLQKIVVGYPFKPGSSDFRFDMNLAYRLKS
VIETYSNNKPSLVFCSSRKSVEQSADILRKELCGRSLVKPQYREAVYKTCLLIRETKIAD
MVRIGIGVHHAGLSAADRKHVEELFRNAMLPVLVSTSTLAMGVNLPAHLVVIKSTVFYSM
GSPTEYSDSQVLQMIGRAGRPQFDTSATAVIMTKSDTKSKYENLMNGTQRIESSLHKHLI
EHLNAEVVLHTITDMALAVEWTRHTFLYVRIMQNPTHYGYPSGLDRKQVEKRLEDLCFQN
LNKLADLKLVTMDEETFAILPTETGKLMARYCIAFDTMKMFDSVSGEETIKDMLELMVSC
SEFDEFVQLRNNEKATLNALNKNKNKPTIRYPMTGRIKTKQMKTNCLMQAQFGCLPIQDF
SLSQDVLKIFRVGQRVAKCLMEFLWQRKEYRALLTAIELLKSTKTRLWVDTKYVAKQLDG
IGPTMSLSLVNAGLTTFHKLEQTNPREIELIVNRHPPFGNQIRDALAVLPKYEMSIEQIN
NYKTNTCVLVVSIKLANRETIQTKKGSTDHQSVILIGNQDNHIVFKWRIVDSQILRDGVW
KRRIDVTQSSAGPELYVHLISVQYVGLDIHTTYVPVYRWCGDHVQMTSDSATIKHPPPDP
GYQTQVKPSLLSGWCNHKCHNKAQCGHKCCKEDVRTRTDQAPGRNHSVTTPARCRNQKGV
DAQIRMLKSKASSLDLLSGTSKRKKMCDVKPGLGLQQYAYQKPPSMRIHDQYANPQQVPA
HSMQETLHRHQPFNPRTPLARLGNIPILKYGVGGRRIDPGFISNMDKTPSYQDLYAEECE
DESDFNTSEYGLTGLDNEDGSISLQYLYPNRGLMNPQKGCPSPSKLTGQTSKVLRADMQR
GTAGKSGSSCDLDLAAEFDNSWDSVSIQQVPSAQPSRNHSPAHTSCHDDWAELHMYQKDR
EAHEQEMFGIDPDGFSPECFTREDLQELDRHSNLHSKDIRQPESYNTRTNMYPSRDSYLQ
PQTYSRSVQQQNQYRNVGSVCGDGHNQLSSPGVEEVSNNTVVFTTSQSSDDELCYVGEIL
GRQGCDTLQPTTPNPNKQYGELRPGNTPVPDNAPCGDMLPVGMKSPPYGSDTRPPRSRKH
SFGQVVAWVADSDSSPCSQKSIPRSRTPLLKRSTLMVELQKRTPTYGSRTTDSEEKSMQL
SSDRVYPETNTSSFFHVFRPNMTDDIGDMNENIFAGIF
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagcatcttcctttcttcaaacatctcacaatcagatggcttgtcaactcag
aaaaggaaatggtctggaataccagaacctccgaccgatattgatgctggaatcttgtcc
agctcgttcttctcagaattaccactgtcagaagtgttccacctttcccagtcccagaag
aaatcaagatcacctcttattttccaatctcaggaaaaagagaatgtttttctacagata
atgcctcaatctcaaagaagcttcaaaaatcaacttccaagatgtaacacattcaaaacc
ccccagaagcaagtttttaatccagtctaccaacgagaagctgatgttgataacctaagt
ttcttggactatgggaccccatctctcagcattacaccaacttataaggggctctcagct
gcagacaaggcacctcactcatcagtgacgcacaggaaactggaatggaatgattggaat
ttacaaaaatatgcagacccctcagatatcccagaaattgatccagaagatgatcaaacg
cctagtcagttgactcctccaaaaagaagatgtttccagttttcacaagcaataaattcc
agttttcaaccagataagacagtggttccatctttcagttgtccatcagtaaatggagac
agaaaattggtccatgacttttcacggacatttccacaaaaagataaagggtccagtttt
tccacaccatgcatcccatcaaggagaaggtccgacccttcagacagtgggttctgtgag
cctagaagtcaagttgattctctgaatactcctgcctctattattgttccaaatacagat
aatggacaaacacgactgcgctccgttgaagaaattcctgccagttttagggaggtgttt
gattttccttacttcaacatggtgcagtcaatggtgcttgatgatgtgctatacacagac
aagccgctggtggtgtcagcccctactggagctgggaagactgtcatatttgaacttgcc
atcatcagactgctcaataagtttgtggaaatcaagaaaaattggaaaattgtttatgtg
gctcctgtcaaggcactgtgcagtgagaggtacctggactggaagaggaagtttcagccg
catggcctgagctgtatggagctgacaggagacacagagatggatgaactgccaggccta
cacactgccaacctcattgtcaccacaccagaaaagtgggacagcatgtcgaggaagtgg
aaagataacaggtcattgttccagatgatatccctgtttcttatcgatgagatccacatc
ttgaatgacagcacaagggggtcaacggtagaggccgtagtcagtcggatgaagaccctg
agactcaccgacagagccactgacgggcctctcatgagatttgttggagtttccgctacc
atccccaacattgaagatattgctacatggcttgggaatcctcaaaatccagcatcaagt
ttcaaattaggtgaaaagtaccgaccagtcaggctacagaagattgtggttggctacccc
ttcaagccaggctcttctgacttcagatttgatatgaatctcgcctaccgactgaagagc
gtcatagaaacctactccaacaacaagccttcccttgtgttctgctcctccaggaagagt
gtggaacagagtgctgatatcctgaggaaggagctctgtgggaggtccctggtgaagcca
cagtaccgggaagctgtctacaagacatgcctgctcatcagagaaactaaaattgcagat
atggtgcgtatcggcatcggggtgcatcatgccggcctgagtgctgcagacaggaaacat
gtggaggagctgttcaggaatgccatgctgcctgttctcgtatcaacaagcacattggcg
atgggtgtaaatcttcctgcccacctggtggtgatcaagtccacagtattctacagcatg
gggtccccaacagagtactctgactcacaggtgctgcagatgataggcagggcagggaga
ccacagtttgacacctccgctacagctgtcatcatgacaaagtcagatactaagtcaaag
tatgaaaacctgatgaacggcacacaaaggattgaaagcagccttcacaagcatctgatc
gagcacctgaatgcggaagtagtcctacacactatcactgacatggcactggctgtggag
tggacaagacacaccttcctctatgtccgcatcatgcagaacccaacccactacggatat
ccttcaggtttggacaggaagcaagttgaaaaacggcttgaagatctttgtttccaaaac
ctgaataaactggctgacttgaaacttgtcaccatggacgaggaaacgtttgccatacta
ccaacagagacaggcaagctgatggcaagatactgtattgcctttgacacaatgaagatg
tttgactctgtcagtggagaggaaacaatcaaagatatgctagaactaatggtaagctgc
tctgagttcgatgagtttgtgcaactgcggaacaatgagaaggccactctgaatgcactg
aacaagaacaagaacaagcccaccatcagatatcctatgactggaagaatcaaaacaaaa
cagatgaaaacaaactgcctgatgcaggcccagtttggctgtcttcctatacaggacttc
tccttgtcacaagatgtcctcaagatattcagagtgggtcaacgtgtggcaaaatgcctg
atggagtttctgtggcagaggaaggagtacagagctttgctgacagccattgagctgctg
aagagtaccaagacaaggctgtgggttgacaccaagtatgttgccaagcaactggatggc
attggtcccaccatgtccctgtcactggtgaatgctgggctgacaaccttccacaagctg
gagcaaacaaaccccagggaaatagaactgattgtaaacagacaccctccatttggcaac
caaatccgagatgctcttgctgtcctacccaaatatgagatgtcaattgaacagataaac
aactacaagaccaacacatgtgtgcttgtagtcagcattaaattggccaatagggagaca
atccagaccaagaagggctccacagatcaccaatctgtgatactcatcggcaatcaggac
aaccacattgtgttcaagtggagaattgttgacagccagatcctgagggatggtgtctgg
aagcggaggatcgacgtgacccagagcagtgctggcccggaactctatgtgcatctcata
agtgtgcagtacgttgggctggatatccatacgacatatgtaccagtgtaccggtggtgt
ggtgaccatgtacagatgactagtgacagtgcgaccatcaaacatcctccaccagaccca
ggataccagacccaggtgaagccatctctcctgtcagggtggtgtaatcacaagtgccac
aataaggcacagtgtggccacaagtgctgtaaggaggatgtccgaacccgcaccgaccag
gcacctggaagaaaccactccgtcacaacaccagcccggtgtcgtaatcagaaaggtgtc
gatgctcagatcaggatgctgaagagtaaagcaagctcacttgatcttctatcaggaaca
tccaagaggaaaaaaatgtgtgatgtgaaacctggtctcggtctgcagcagtatgcctac
cagaaacctccttcaatgagaatacatgatcagtatgccaacccacagcaagtacctgct
cactccatgcaggagacactgcacagacaccagccattcaacccaagaacccctcttgcc
agacttggaaacatccccattctcaagtatggtgtaggtgggcggaggatagatccaggg
ttcataagcaacatggacaagactccctcgtatcaagatctgtatgcagaagagtgtgag
gatgaatctgattttaacacgtctgaatatggtttgactgggttggataatgaagatggc
agtatatccttgcagtacttgtatccaaacagaggtctgatgaatcctcagaaaggatgt
ccgtccccatccaaactgacaggacaaacatcgaaagtgctgagagcagacatgcagaga
ggcactgctgggaagtcaggatcatcttgtgaccttgaccttgctgcagagtttgacaac
agctgggacagtgtgagcatacagcaggtgccctctgcacagccatcccggaaccactca
cctgcacacacctcttgtcatgatgactgggctgagctccatatgtatcagaaggataga
gaggcacatgaacaagagatgtttggaatcgatcctgatggcttttcacctgagtgtttt
acaagggaggatctgcaggagctggacagacacagcaaccttcactctaaagatatcagg
cagccagaatcttataacacaagaacaaacatgtacccatcaagggacagttacctacag
cctcaaacatacagcaggtctgttcaacagcagaatcagtacaggaatgttggcagtgtg
tgcggggatggacacaaccagctgtcaagtcctggtgtggaggaggtcagcaacaacact
gtggtgtttacaacaagtcagtccagcgatgatgaactatgttacgtaggagaaatactc
gggagacagggctgtgatacactgcaaccaacaacccccaacccaaacaaacagtatgga
gaattgaggccaggtaacacccctgtcccagacaatgcaccatgtggagacatgctaccg
gtaggaatgaaatcccctccctatggctccgacacacggcctcccagatctagaaaacat
agtttcggacaagttgtagcctgggtggccgactccgactcctccccctgtagccagaag
tccatcccaaggtcaaggacaccactgcttaaaaggagcaccctaatggttgagctgcag
aaaagaacacccacatatggctcaaggaccactgacagtgaagaaaagtccatgcagctg
tctagtgaccgggtgtacccagaaacaaacacatccagcttcttccatgtgttcaggccc
aacatgacggacgacataggcgacatgaatgaaaacatttttgctggcattttctga
DBGET
integrated database retrieval system
