Haliotis rufescens (red abalone): 124151108
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Entry
124151108 CDS
T07893
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04137
Mitophagy - animal
hrf04140
Autophagy - animal
hrf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124151108
04137 Mitophagy - animal
124151108
04148 Efferocytosis
124151108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrf03000
]
124151108
Transcription factors [BR:
hrf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124151108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1a_CTAD
PAS_9
HIF-1
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
124151108
NCBI-ProteinID:
XP_048259125
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MTSKDKKRNSDKRKEKSRDAARCRRSKETEVFYELAQNLPLPSSVSTQLDKASIMRLTIS
FLKICKIREEKKWHDDEEQCEDGEIEKRLHQMYPKALEGFVLILSREADIVYLSENTAKY
LGIQQIELMGQSIFDFTHPCDHDEIRDMMSDRPHGAKAVSEERTLFIRMKCTLTSKGKSV
NLKSATYKVIKCTGRLVVAKMKSKKEADDASMYPYLLAVGEPIPHPANIEVPLDSSTFLS
KHNMNMTFTYCDDRIQDLIGYNSENLIGRSLYNYHHALDSEVVEKAFKDLFAKGQTMTGQ
YRFLAKNGGYTWVITQGTIIHNNRTQKPQWVVCVHYVLSAVQEKNMILSDVQQQTADDLL
SFKMEQSTDKIFGPRTKDMEQNYFVPEELKNNITLVNNEPADLSYLAPTAGDGCVQLGFP
IYSQVADFACMDKDLPPPMCKEEPDPGPRDVHRSQELYSNNPSPASLSPRIQSPDEYQTI
ASPTDVDLMDKFFSTMDATQKSGSDSDMEDVDLNMRAPYIPMNADEDFSLVPPSTDSLFT
LQSDFNPGLFGRTESVFMDKNAFEIPRCPMQPSVRDMIGGSTVVASIKQPPDTMLLQVKR
PLDMNSLEKGPPVAKAVKRNDPRPLLGVMPTPSRQFQTLLLPPPPMRSMIPGKSCRFSVN
PFCLPEGLPTKESVLLNLLLTGEDRNHGYKVNSTLQRMRGLKHDTLFTDLTRQDCEVNAP
VQSQRLLQGEDLRQALDADCRLNKRNLAAVM
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaaagacaagaaaaggaacagtgataagagaaaggagaagtcccgagatgcg
gccagatgtcgtcgcagcaaggagacagaggtgttttacgagttggcccaaaatctgccg
ttgccgagcagtgtcagcacccaacttgacaaggcctccatcatgaggctgaccatcagc
ttcctgaagatctgcaagattagagaggagaaaaagtggcacgatgatgaagagcagtgt
gaggatggtgaaattgagaagcgtcttcatcagatgtacccaaaagccttggagggattc
gtcctcatcctctctcgggaagccgatatcgtatacctgtctgaaaacacagccaagtat
ctcggcatccaacagattgaactgatgggacagagtattttcgacttcactcacccgtgt
gaccatgacgagatccgtgacatgatgtcagaccgcccccacggcgccaaggccgtgtct
gaggagcgcacgctcttcatccgcatgaagtgcacgcttaccagcaagggcaagagcgtc
aacctcaagtctgcaacatacaaggtgatcaagtgcacagggaggctggtcgtagccaag
atgaagagcaagaaggaggctgacgatgcctccatgtacccctacctgctggctgttggg
gagcccatcccccaccctgccaacatcgaggtcccccttgacagcagcacatttctcagc
aaacacaacatgaacatgaccttcacctactgtgatgacagaatccaggacctgattggc
tacaacagtgagaatctgattggtcgatccctctacaactaccaccatgcactagacagt
gaagtggtggagaaagctttcaaagatctgtttgccaaaggacaaactatgaccggtcag
tatcggttcctcgccaagaatggaggctacacatgggtgatcacacaaggcactatcatc
cacaacaaccgcacgcagaagccccagtgggtcgtgtgtgtccactatgtcctcagtgcc
gttcaagagaagaacatgattttgtctgacgttcagcagcaaacagcggatgacctcttg
tccttcaagatggagcagagcacagacaagatattcggacccaggacaaaggacatggag
cagaactactttgttcctgaggaactcaagaacaacataacattggtgaacaatgagcct
gccgatctgtcctacttggcccctacagctggagatgggtgtgtccaacttggcttccct
atctactcccaggttgctgatttcgcatgcatggacaaagaccttccccctccaatgtgc
aaggaagaacctgatcctggacccagagacgttcaccgcagtcaggagttgtacagcaac
aacccctcacctgcctccctctcacccaggattcagagccctgatgagtaccagaccatc
gccagccccactgatgtcgacctcatggataaattcttctcaacgatggacgccacacag
aagtcaggctctgacagtgacatggaggacgtggacctgaacatgagagccccgtacatc
cccatgaacgccgacgaggacttcagcctcgtacctcccagcacagactcactcttcaca
ctgcagagtgacttcaacccaggacttttcggccggactgagtccgtgttcatggacaag
aatgctttcgagatcccccgctgccccatgcaaccgagtgttcgagacatgatcggaggg
agtactgtggtagcaagcataaagcagccgcctgacaccatgttactgcaagtcaaacga
cctctggacatgaatagccttgaaaaagggcctcctgttgcaaaagcagtaaagcggaat
gatccgagacccttgcttggagtcatgcccactccaagcaggcaattccaaacgctgttg
ctgccgcctccgcccatgaggtccatgataccgggcaaaagctgtcgcttcagcgtaaat
ccattttgtcttccagaaggtttgcccaccaaggaaagcgtattacttaatttattactc
accggtgaagaccgtaaccatggttacaaagtcaactcaactctccaacgaatgcgtggg
ttgaaacatgataccttgttcacggacttgactcgccaagactgtgaagtgaacgccccc
gtgcaatctcaacgtcttctgcaaggcgaggatctgcgacaagcccttgatgcggactgt
cggctcaacaagcgcaacctggcggccgtcatgtag
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