Haliotis rufescens (red abalone): 124151828
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Entry
124151828 CDS
T07893
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124151828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrf03021
]
124151828
03036 Chromosome and associated proteins [BR:
hrf03036
]
124151828
Transcription machinery [BR:
hrf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124151828
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124151828
PBAF complex
124151828
GBAF(ncBAF) complex
124151828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
124151828
NCBI-ProteinID:
XP_046380434
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MAVLQRKKDGAPNAKFFEAVETIAQFDSARTWLHKNCKRYTQADPPTNKGLSSLVIQLLQ
FQEDAFGKSQTNPALTKLPMKCFLDFKAGGGLCQIFAAVFKFKSDQGWRRFDFQSPSRMD
RNVEMFMQIEKALVSSKCLPPPSIFIRPDVDKILIPKLKDIIKRHQGTMCDDADDATHIV
HTLPSHPPPNDEYFRPVLKRDRHSLVHWWYYPDSYDTWVTDTNIDYDPDSPYSHQGAFEV
SARWLLDLEEFNEWMNEEDYLVEDEFNADGSNKKYKKSNRLKLTLEDLNNPDPDRRDKKD
KKGKRKRSPSPVPEKKKRKSIHPSSGRTPGLSSTKKRSTRDEEEEDLTKDMEEPTPEPNI
QEVAIAKQVPGSRSQKDSELQPIKGGTLMDIEEDQGDKVEPERAETGSTTDEGSKKDKED
QEDNLTEQTHHIVIPSYSAWFDYNSIHAIERRALPEFFNGKNKSKTPEIYMAYRNFMIDT
YRLNPTEYVTSTACRRNLAGDVCAIMRVHAFLEQWGLVNYQVDADTRPTPMGPPPTSHFH
ILADTPSGLQPINPPKTNQPPAAQQIMDFSEKSEDKEDEKRDMSKFGLRMDIYAKKALKD
KSAASRMREWTDQETLLLLEALEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEE
DYQQLGPLTYQPIPFSQSGNPIMSTVAFLASIVDPRVASAAAKSALEEFSKMKDEVPPTL
IDAQSKMIEEATKEGKAVDASFCLEKSGIAGTAPEKEEGIKEPAETIPNGEEVKAAETDE
TKKEIKEEKKDEPSEEAMETDSTDVVTKKEKEDKEEGGEKKDKEEKEKEEEKEKEKEPEK
ESKDSEEKTETAEKEEGEETEKVGGKASVAKSKQDDASEKPEDSEATDKKEEEKEEEEKA
LEKVEKVKDGKDGNIATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKL
RHFEELETIMDREREALEYQRQQLLQERQQFHMEQIRAAEYRARQIAMQQLASEQRQQQA
QQQGGDAGAGSTSGANAAVQNPTLAAAVGQGNYPMHGSPMPPQGPQVQQAHQVSSGSPAP
PQSSSQPATPQQLTPTPPQTQSPHPQGPQASAAPVHQPPSQPPGQSPYQQMTGPAQQQPY
STPSPAPQQFSTQSPGPQGQPQQNYPQPGHQGPPPQPYQQPNPGQMAPYHQGQQQPPQQQ
QQQQQQPGSFQPHSQGQPSYPPPHSQNQAPYPQQPQQSQQYPPHPQGPYPNFNQAGPYPP
QAGQPYPPPQASQYPTPGHGMPPQSTPLPASGRAMNQPGSAPESGSEQQPQVPPPSK
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctccaaagaaagaaagacggcgctccaaatgccaagttttttgaagccgta
gaaactatcgcgcagtttgatagtgcaagaacatggttgcacaaaaactgcaaaaggtat
actcaggccgatccccccaccaacaaaggcctgtcaagtctcgtcattcaactattacag
tttcaagaagatgcatttggaaaatcccaaacaaacccagcacttactaaattgcctatg
aaatgtttcctcgacttcaaggcaggaggtggactttgtcagatttttgctgccgtcttc
aaattcaaaagtgaccaaggatggagaagattcgacttccagtctccatcccgaatggac
aggaacgtggagatgtttatgcagatcgagaaggcgctcgtctccagcaagtgcttgcca
cctccctccatcttcatccgccctgacgtggacaagatcctcatccccaaactcaaggac
atcatcaagaggcaccagggcacgatgtgtgacgatgctgacgacgccactcacattgtg
cacacactgccatcccaccctccacctaatgacgagtatttccgaccagtgctaaagagg
gatcgtcattccttggtacactggtggtactaccctgacagctatgacacgtgggtgact
gatactaatattgactacgatccagactccccatactcgcaccagggtgccttcgaggtg
agtgcacgatggctgctggacttggaggaattcaatgaatggatgaatgaagaggattat
ttggttgaggatgaattcaatgctgatggcagcaataaaaagtacaagaaatcaaacaga
ttgaagttgactttggaagatctgaacaaccctgaccctgaccgaagagataagaaagac
aaaaaggggaagaggaaacgatcaccgtcgccagtgccagagaaaaagaagaggaagagt
attcacccatctagtggacggacaccaggactcagttctactaagaagaggtccactcgg
gatgaagaggaggaagatttgaccaaggacatggaggagcctaccccagaacccaacatc
caggaggtcgccattgccaaacaagtacctggatcccggagtcagaaggacagtgagctg
cagcctatcaagggagggacattgatggacatagaagaggaccaaggggacaaggttgag
ccggagcgggcagagaccggatccacaacagacgaggggtccaagaaggacaaggaggat
caggaggacaacctgacggaacagactcaccacatcgtcatccccagctactccgcctgg
ttcgactacaacagcatccacgccatcgagcgacgagcactgcctgaattcttcaatgga
aagaacaaatcaaaaacgccagaaatctacatggcatatcgcaacttcatgattgacacg
taccgcctcaacccgacggaatacgtgaccagcactgcctgcaggaggaacttggctgga
gatgtctgtgcaataatgagagttcatgcattcctggaacagtggggtctagtcaactac
caggtggatgccgacacccgccccacccccatgggacccccacccacgtctcatttccac
atccttgccgacaccccctctggtctgcagcccatcaacccacccaagacaaatcagcca
ccagcagcccagcagatcatggacttcagtgagaaatcggaggacaaagaagatgaaaag
agggatatgagcaagtttggcctccgaatggacatctatgctaagaaggccttgaaggac
aagagtgcagcatcgcggatgcgtgagtggacggaccaggagacgctactgttactggag
gctctggagatgtacaaggatgactggaacaaggtgtgtgagcacgtcggcagccgtacc
caagacgagtgcatccttcacttcctgcgtcttcccatcgaggacccgtacttggaggaa
gactaccagcagctcggtccactgacgtaccagcccatccccttctcacagagtgggaat
cccatcatgtcgactgtggctttccttgcatccatcgtagaccccagagtcgcaagtgca
gcagccaagtcagccctagaggagttctccaaaatgaaggatgaggttccgccaacgctg
atcgacgctcagtctaagatgatcgaggaggcaacaaaggaaggcaaggcagtcgatgcc
tccttctgtctggagaaaagtggaattgcaggaactgcccctgagaaagaagaaggtatc
aaggagcctgctgagacgatacctaatggggaagaagtcaaggctgctgagacggacgag
acgaagaaggaaataaaggaagaaaagaaagatgaaccaagtgaggaggcgatggagaca
gacagcactgatgtggtgacgaagaaggagaaagaggataaggaagaaggtggggaaaag
aaagacaaagaggagaaagaaaaagaggaggagaaggaaaaagagaaagagcctgagaag
gaatccaaagattcagaagaaaaaactgaaactgctgagaaggaagaaggagaagaaaca
gaaaaggtgggaggcaaagcttctgttgccaagtcgaaacaagatgatgccagtgagaag
ccggaagacagtgaagctacagataagaaggaagaagaaaaggaagaagaagagaaggca
ctggagaaggtggagaaagtcaaggatggcaaggatggcaacatcgccacggctgcagcc
tctgctcttgctgcagctgccgtcaaggccaagcacctggctgctgtggaggagaggaag
atcaagagtctggtggcgctgctggttgagacacagatgaagaaactggagatcaaactg
agacactttgaggagctggagacaatcatggacagggagagagaagcgctggagtaccag
agacagcagctcctgcaggagaggcagcagttccacatggagcagatccgggcagctgag
taccgcgccaggcagatcgccatgcagcagctggcctccgagcagcgacagcagcaggct
cagcagcagggaggggatgcgggtgctggttccaccagtggagctaatgccgcagtgcag
aaccccacccttgcagctgctgtgggtcagggtaactaccccatgcatgggtcacctatg
cctccccaggggccacaggtacaacaggctcatcaggtgtcctcgggctcgcctgctcct
ccccagtcctcctcccagcctgctacgcctcagcagttaacccccaccccgccacagact
caatcaccccacccccagggacctcaggcttcggcagcgccagtgcatcaacccccgagt
cagccccctggacagtccccctaccagcagatgacggggccggctcagcagcaaccctac
tccaccccttctcctgctccacagcagttctccacccagtcgccaggaccccagggacag
ccccaacagaactacccacagccaggccaccagggcccgccacctcagccctaccagcag
cccaaccccggacagatggcgccttaccaccaaggacagcaacagccaccgcaacaacag
caacagcaacagcaacaaccagggtccttccagccacactcgcaaggtcagccatcatat
ccgcctcctcactcacaaaaccaagcaccttaccctcagcagccacagcagtcgcaacag
tatccaccccacccccagggaccctacccgaacttcaaccaagctgggccttacccccct
caggccggccagccttaccctccacctcaagctagtcagtaccctaccccgggtcatggc
atgccaccccagagcactccgcttcccgcttccggccgagctatgaatcagccaggtagc
gcacctgaaagcgggtcggaacaacaacctcaggtgccgccaccctccaaatga
DBGET
integrated database retrieval system
