Haliotis rufescens (red abalone): 124151838
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Entry
124151838 CDS
T07893
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrf04990
]
124151838
Domain-containing proteins not elsewhere classified [BR:
hrf04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
124151838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
PDZ
LIM
CAMSAP_CH
PDZ_6
PDZ_2
CDC24
Motif
Other DBs
NCBI-GeneID:
124151838
NCBI-ProteinID:
XP_046380442
LinkDB
All DBs
Position
Unknown
AA seq
1703 aa
AA seq
DB search
MAEDTPDNDAWDAKFLEDEEMDFFTELALHETERWIQAVTRKTFVYPDDPRKSLENGILL
CELLNCLRPGSVKRINKQATPIAGLDNLNVFLTSLKNHFGLPDSHLFDVADLEDLSQRAI
ADSDQLKQVADRRLRNVAITVYWLGKVVNQSFQGPHLDFTAFAPLVHHHSKDIILNDHFR
RDSSCSWESNEYCSAYGSHEGNSLGNIREQENRHHRDSSYESYASYEKGSEDSLDEQVFD
NMPVRYGSQSALNKMGDGMYSDDRQNSMYRSSPDLSQGSYHRRSSSNDSLDGSYHGSHSR
QSSGSMENYPTRPHRRTSSSTADPLQFVKMQKQTDLAKKAEEQMKLAATQKEIKKDVSVS
KDEDDWLSNLSSWKTRRKSQSHQAYQLKEELEELSKDKEEEVKTTLQTKTFSQMQQERER
RKSSNVRSFYPVEENEEESDVNTRQESAYISSDSITTGLQLSTSTDAVAHWANDSEGENE
DNNNNQSVDNKNGMLEDPFDEPETSPGRKPSPSKRRSGNMDSQSSPDNRDWEVRKSVSNK
NSRNSLESTPACNKINDIRHRFEQTVEQPKSLSSAVHTKVDLKSRLESFENRDNYPEPVH
SSRISDSENSFSTRSVANVGDDSRFRRSNVSESASAMETRFSRSHENGAERGAKDNGSGS
PKRIYRETSTTSTKNMYGSLRKSGRDYTEKNIKISQKPNSEKGFGFTILGGVDTQQPVTV
QKITLGSAADVCEVLARDEILSINKCDISSRTNVEVSQLIQGAVKTGQLELRVKRFLGSN
DEEDEFLSSDDEFESMERSRSSAVHGEDPKHEGNTSYDSRDSTTSQEDFRAAVNKNPVAS
ALDEERQWIMDQLDYGHPTPQDEVQEPTARHHLYKDQERESFEPIHQESSSPRQLASEPY
TSPTRAEEVLTRPTITMRRETGTRGSGQTTPDPRPAAEFDTHYEMEKRSQHQAGPHGAGA
DDVGPPAILRKWQRQRPQSEYTFEREKSPDKHLSSTLPWMENKLAANDPKDDLVLERTVR
DYASSQPEPPVPSPRRRFEDHKKQEEWNQKQEDLRQQPDSNQREVEVTKEIFSASQTTLQ
QEYESDIRRAQEIAKQREEQEQQMLEPELRRMRVTEERRQERRMRQQQLQQSAAETSPEY
VLRHQEDTVQPFQLYEQNSNTADSVPDEKTRSTMSFQIQGQGQSQGQGHPGVLVIDPRNR
GDEDSQPGYNFQVNINQPGLSEDMYVHPTQQAATYQPPFVDVEAIREEERRKIREEERRR
REEEEDRRFRDKEAILREQEEQLRQKEEHLRQEQERFHQEQEQLQLLRASAEQQADVTRF
EAPVSQVREASPSYQSTITQKRLEKMRNQAAPHYSTTVVVEPKPWQQSHVKLVTDGSGKP
TFSREDMLAMNRKPTPLQTRPDTTPPNSPTGSGPIKRPTPSREQLRSLNAVPKPKFRSSH
DWIGGEQNMQHNTRSFPSSRHSDIMRKQYSTPQEHWLFEEAERRRLANQDPKSQTRQPTQ
TQFSGPIKPTADNRWRGEPSMDRRQSPNLNSSFEPHHPEGNMPAAIRQTLLQKTAGARGS
TGSNYSQDLGGSYNQHPYQGPSLSQTMPTSYNYNSPRYRDQQGQDIQVPPSSRAPPPPQK
SDSSTALSGRQQCSHCNQELGFGAAMIIESLGLSYHVQCFKCCVCHTPLGNGSEGADVRV
RVNKLHCPNCYSNDEAGLKFSKV
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagacacaccggataacgatgcatgggatgcaaaatttctggaggacgaagaa
atggatttttttaccgaattggcccttcatgaaacggagagatggatacaggctgttacc
aggaagacatttgtgtatcctgatgacccccgcaaatccctggagaatggaatactactc
tgcgaattacttaactgtttgcggcctggctcggtcaagaggatcaacaaacaagccaca
cctatagcaggattggacaacctgaatgtgtttttgacctctttgaagaaccattttggt
ctcccagactcacacttgttcgatgttgctgacctggaagacttgtcacagagagcaata
gcagactctgatcaactgaaacaagtagcagatcgacgactgagaaatgttgccatcact
gtgtactggctaggcaaagttgtaaatcaatcattccaaggaccacatctagacttcact
gcttttgcacctctggtgcaccatcactccaaggacatcatattaaatgaccatttcaga
cgggactcctcttgttcatgggagtctaatgaatattgcagtgcttacgggtctcatgaa
ggaaattctctcgggaatatacgagaacaagaaaaccgccatcatagagacagttcttat
gagtcttatgcatcctatgaaaaaggttctgaagatagcctagatgaacaagtgtttgac
aacatgccagtccgctatggaagccagtctgcactcaacaagatgggtgatggcatgtat
tcagatgaccgacaaaacagcatgtaccgaagtagccctgatctttcacaggggtcatat
cacagaaggtcttcctccaacgacagtctagatggatcttaccatggcagccactcacgg
cagtcgtcggggagcatggagaactatcccactaggccacatcgccgcacaagttcttcc
acagctgatccactgcagtttgtgaagatgcagaaacagacagacttggccaagaaagct
gaggagcaaatgaagttagctgccacacagaaggagatcaaaaaggatgtgtctgtcagc
aaggacgaagatgactggctgtcaaacctcagtagctggaagacacggaggaagagccag
tcccatcaggcatatcagctgaaggaggagttggaggaactctccaaagacaaggaagag
gaggtgaagacaactttacagacaaagaccttcagtcagatgcagcaagagagagagcgg
cgtaagagttccaatgtgagaagtttctaccctgtagaagagaatgaggaggagagtgat
gtgaacacacggcaggaatctgcctacatcagcagtgacagtatcacaacaggactgcag
ttaagtaccagcaccgatgcagtggctcactgggcaaatgacagtgaaggtgaaaatgaa
gataataataacaatcagtcagttgataataagaatggaatgcttgaggatccttttgat
gagcctgaaacatctcctgggaggaaaccaagtccgagtaagaggcgatctggtaatatg
gatagccagtcttctccagataacagagattgggaagtgaggaaaagtgtttcaaataaa
aattcacgcaatagccttgaatctactcctgcatgcaacaaaattaacgatatcagacac
aggtttgaacaaactgttgaacagccaaaatctctatcttccgcagttcatacaaaagtg
gatttgaaatctcgccttgaatcatttgaaaacagagataattatccagaaccagtgcac
tcctcaaggatatcagacagtgagaacagcttttctacgagatctgttgccaatgttggg
gacgattctcgattcaggcgtagtaatgtgagtgaaagtgcttcagccatggaaactagg
ttttcacggagtcatgaaaatggtgcagaaagaggtgccaaggataatggcagtggcagc
ccaaaacggatttatagagaaacatctaccacctctacaaaaaatatgtatggaagcttg
cggaaatcaggccgggactatacagagaaaaatatcaaaattagtcagaaaccaaatagt
gaaaaaggttttggatttacaatacttggaggagtagatacccaacagccagtgacagtg
cagaagatcacactaggaagtgcagctgatgtgtgtgaggttttggccagggatgagatc
ctgtccatcaacaaatgtgatatttccagccggaccaatgttgaggtgtcccagctgatt
caaggtgcagtcaagacaggccagctggagctcagggtgaagcgcttccttgggagcaat
gatgaagaagatgaatttttatctagtgatgatgagtttgagtcgatggagcgatcccgg
agtagcgcagtccatggagaggaccccaaacatgagggtaacacctcctacgacagcaga
gactcaacaacatctcaggaagatttccgtgcagcagtgaacaagaacccagtggccagt
gctctagatgaggagagacagtggatcatggaccagctggactatggacaccccacacca
caggatgaggtgcaggaaccaacagccagacaccatctgtacaaggatcaagagcgtgag
agttttgagcccatccatcaggagtcctccagcccacgccagctggcctctgagccatac
acaagccccaccagagcagaggaggtcctgacccggcccaccatcacaatgagacgcgag
acggggacacgggggagtggacaaacaaccccggaccccaggcctgcagccgaatttgac
acccactatgagatggagaaacgaagccagcatcaggcggggccacacggtgctggggca
gatgatgttggtccaccagcaatcttgaggaagtggcagagacagagaccacaatcagag
tacacctttgagagagagaaatcacctgacaagcatctcagttctacattgccatggatg
gaaaacaaattggcagcaaatgatcccaaggatgatctagttctggagagaacagtgagg
gactatgcatcctctcagccagaaccaccggtcccatcaccacggcgacgatttgaagac
cacaaaaagcaagaagagtggaaccagaagcaggaagacttgagacagcaacctgactcc
aaccagagagaggtggaagtcacaaaggagatattttctgcctcccagacaaccctgcag
caggaatatgagagtgacatcagacgagcccaggagattgctaagcagcgggaagaacag
gagcagcagatgttggagccagaattgcggcggatgcgagttacggaggagcggagacaa
gagcgcaggatgcgacagcagcagttacagcagtcagcagcggaaacgagtccggagtac
gtgctgcgacaccaagaggacactgttcagcccttccagctctatgagcagaacagcaat
actgctgactcagtgcctgatgaaaaaactaggtctaccatgtcattccaaatacaaggt
caagggcaatcccagggtcaaggtcatccaggtgtgttagtgattgacccaaggaacaga
ggtgatgaagattcccagcccggctacaacttccaggtgaacatcaaccagcccgggttg
tccgaggacatgtatgtccaccctacccagcaggcagccacctaccaaccaccttttgta
gatgtggaggcaatccgagaggaggagaggaggaaaataagagaagaagagaggaggaga
agagaggaggaggaagaccgaagattcagagataaagaagcaatcctcagagaacaggag
gaacagcttcgtcagaaggaggagcatctgagacaggagcaggagagatttcaccaagag
caggagcagctgcagctgctgagggcttctgctgagcagcaagctgatgtcacccgattc
gaagcgccagtgtcacaggtgagggaggcctccccttcctatcagtcgacaatcacacag
aaacgtctagagaagatgcgcaaccaggcagcccctcattattccacaacagtggtggtg
gagcccaaaccttggcagcaaagccatgtcaagttagtgactgatggcagtggtaagccg
accttctcacgagaagatatgttagccatgaacaggaaacccacacctttacagactcgc
ccagatacaactccgccaaacagtcccactggctcagggccaatcaaacgtcccactcca
tccagggaacaattgcgttccctcaatgctgtgcccaaacccaaattcagatcatcacat
gattggattggcggtgaacaaaatatgcaacataatacgcgaagttttccatcatcaaga
cattctgatatcatgagaaagcaatattctaccccacaagaacactggttatttgaggag
gcagagagaaggagactggcaaaccaggatcctaaatctcaaaccagacaacccacacaa
acacagtttagtggtcccatcaaacctacagcagataatcgctggagaggggagccgtct
atggataggagacagtctccgaatttaaactcctcttttgagccacatcacccagaagga
aacatgccagctgctattcgccagactcttttgcagaaaacagcaggtgcccgtggttca
actgggagcaactattcacaggatctgggtgggtcttacaatcaacacccttaccaaggt
ccatcattgtcacaaaccatgccaacatcttacaactacaacagcccacgttacagggac
caacaaggtcaagatattcaagtaccaccatcaagccgagcaccgccaccccctcagaag
tcggattcctccacagctctaagtggcagacaacagtgctctcattgcaaccaggagcta
ggatttggtgcagcaatgatcatcgagtccctgggtctatcataccatgtgcagtgtttc
aagtgctgtgtgtgtcacacaccactagggaatggcagtgaaggtgctgacgtccgggtc
cgggtcaacaagctgcactgccccaactgctacagcaacgatgaagctggcctgaaattc
agcaaagtttaa
DBGET
integrated database retrieval system
