KEGG   Haliotis rufescens (red abalone): 124153032
Entry
124153032         CDS       T07893                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
hrf  Haliotis rufescens (red abalone)
Pathway
hrf03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124153032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrf03019]
    124153032
   03041 Spliceosome [BR:hrf03041]
    124153032
Messenger RNA biogenesis [BR:hrf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     124153032
Spliceosome [BR:hrf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    124153032
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 EIF3I Beta-prop_TEP1_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR54 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 124153032
NCBI-ProteinID: XP_048257239
LinkDB
Position
Unknown
AA seq 352 aa
MYGGRNQNVNNSMPTEDRGLSVRQFLHTTVFSQCFSPCGKYLVAANNYGQIAVFNLSSSL
SPDAVDTSYSPVFTFRASEDGAVYCLASTSTLLISAGEGDICAWRWADILNKAPKIIWSF
SLPKKGVFTNPEVNSIVMDQQETGQKLVAGCGDNNVHVWDMESGNLEQTLGGHEDYVHRV
CLKNEGRECLSASEDGTVRMWDLRSPGESVHILEPSKHEMCGRPEMGRWLGCVTLDSGED
WMVCGGGPKLAMWHMRSLQPTTTFNTPGVCQTFARFHDDTLISGGTEPMVNHWFLNGELK
QGVPCTPTSVFNVNINLNSDKYKVLSVGGSSAMIDVCTNFGYKAFSLKFKTS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgtatggcggtaggaatcaaaacgtaaacaacagtatgccgacagaggaccggggtttg
tcagtgcggcagtttctccacacaaccgtgttctcacagtgcttctctccatgtgggaaa
tacctcgtggcagccaacaattatggccagatcgccgtgttcaatttatcctccagtctg
tcgccagatgctgtggatacctcctacagtccagtcttcacattcagagctagcgaggat
ggagctgtgtactgccttgcctccacgagcacgctccttataagtgctggggaaggagac
atctgtgcatggaggtgggcagacatcttgaataaggctcctaaaatcatctggtcattt
tctctgcccaaaaaaggagtgtttacaaacccagaagttaactccattgtgatggatcag
caggagaccgggcagaagctagttgccgggtgtggtgacaacaacgtgcatgtgtgggac
atggagtccgggaatctagagcaaactctgggcggccatgaggactatgtccatcgtgtc
tgtctgaagaacgaggggcgggaatgtctgtctgcatcggaggatggaactgttagaatg
tgggacctgagatcgcccggagagtccgttcacatactggaaccttccaagcatgagatg
tgtggtcggccagagatgggcagatggctgggctgtgtgacgttagactccggggaagac
tggatggtgtgtggcggtgggccgaagttggcgatgtggcacatgagatctctccagcca
accacaacgttcaacacaccgggcgtctgtcagacatttgcccgatttcacgatgacaca
ctgatatcgggagggactgagccgatggtgaaccactggttcctgaacggggagctgaaa
cagggggtgccgtgtacgcccaccagcgtcttcaacgtcaacatcaacctcaactccgac
aagtacaaggtgctgagtgttggaggaagcagtgcaatgatagacgtctgcaccaacttt
ggctacaaagctttctctctcaagttcaagacatcatag

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