Haliotis rufescens (red abalone): 125374031
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Entry
125374031 CDS
T07893
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125374031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
125374031
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125374031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
125374031
NCBI-ProteinID:
XP_048240684
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MAEVAAVPAPGAAPAEDDETWLYGDENKEQKDPEKDGQKKKKKSDGDGSEKPEDKEEGEM
SGEEEAQAKNDDDDSDDDDNVQVTIGDIKQWTVTETPRNLFKSGSGYQKPGAGVAGAQKT
VVPGKGMDLEAQGTVNGVPTFEFDIDSLSAEDKPWRNPGADITDYFNYGFNEDTWQQYCE
KQRRLRLENGVPLLGNKSQSRDSHSHHSHLGSGQPISRLGDKDSGQTGSSIPTTSSLRKA
QPPPNRKMGGTIDVIGSTVHDSRRPGQGPTPSSIPVTGVTPDYRKFQPPSVPPPGMPPMM
PDYSMPPPGMPPPLGLPPPGVPPPPGVAVPLPTPYGSEQYDPFSHPPPGFNYESNTFTPS
YTEGHHQNFQSYDDRWKYNSDRHARDRSPEPEFGRENYWRDRERDRDRERDRGDRERERE
SYRERDRGRERERDRDRDKRRSRSTDRDDSRHRDDKHRTRRKHRDDEDDHHRSKHRKSKK
RRDKDEEGGDSVTTADEGDKGE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagttgcggcagtaccggcgccgggagctgcaccggcagaagacgatgaaaca
tggctttatggtgatgaaaacaaagaacagaaagatcctgagaaggatggccagaagaag
aaaaagaaaagtgatggagatgggtccgagaaaccagaagacaaggaagaaggggagatg
agtggtgaggaagaagcacaggcaaagaatgatgacgacgattccgatgatgatgacaat
gtccaagtcaccatcggcgacatcaaacagtggaccgtcacagaaactccccggaacctg
tttaagagtggcagcggctaccaaaagcctggagcaggagtggcaggagcacagaagacg
gtggtgccggggaaagggatggatctggaagcccagggcacagtcaatggagttccaacg
tttgagtttgatattgacagtctctcagctgaagacaaaccctggagaaaccctggtgct
gacataactgactacttcaactacggcttcaatgaggatacctggcagcagtactgcgag
aaacagcgacgactacgtctggagaacggcgtgcccctcctcggcaacaagtcacagtcc
agggacagccactcccaccactctcaccttggctctggtcaacccatcagtcgcctcggg
gacaaggactcgggacagactggatccagcatacctacaacaagttcactaagaaaagct
cagccgcccccaaacagaaaaatgggaggtaccattgacgtgattggtagcacagtccac
gattcccgacgcccaggtcaaggacccacacccagctccatacctgtcacaggggtcact
ccagactatcgcaagttccagcccccatcagtacctccaccggggatgccaccaatgatg
cccgactactccatgcccccacccgggatgcccccacccctggggctgcccccaccaggc
gtgccccctccgccaggtgtcgctgtacctctcccgacaccctatgggtccgagcagtat
gatcccttcagccacccccctccgggcttcaactatgagagcaacaccttcactccaagt
tacactgaaggacatcaccagaacttccaaagctatgatgaccgatggaagtacaattct
gaccgacatgcacgagaccggagcccagaaccagagttcggaagggaaaattattggcga
gaccgtgagcgagaccgagaccgagagagagaccgtggcgacagagaacgggaacgagag
tcttatcgtgaaagagataggggtagggagcgggagcgggaccgagatagagacaagagg
aggtcaaggtcaactgatagagatgattctcgtcatagagacgataagcacagaacacga
aggaagcaccgagatgacgaggatgaccaccatcgatccaaacacaggaagagcaagaag
cgaagagacaaagatgaggaaggcggagactccgtgactacagccgatgaaggggataaa
ggggaatga
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