Haliotis rubra (blacklip abalone): 124253088
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Entry
124253088 CDS
T07967
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hrj04054
]
124253088
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124253088
Pattern recognition receptors [BR:
hrj04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
124253088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
DEAD
ResIII
RIG-I_C
Helicase_C
CARD_2
AAA_22
AAA_19
AAA_11
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
124253088
NCBI-ProteinID:
XP_046542767
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MACKVPEETQTSLTYQIGMIEICRSTFEKYLRPATVLDNMDLEATMKERIRAQESLERQK
AVTTLLEAVLGDPEKNVPLFIYALRQTGFEHFFDVFEEDTSNAESNTKAARYEMFILMLE
GELKDKIIPTEIIDDLKPILSDRDYELIRNLETERSAHDACQELFLAMPRKTPRWSLHFM
NALYKAYGSQFTDKIHNVSDSDETGSSGDSGEESGDGEASTVSDCVMSTRTQQQTVAKVP
VAEVFVPDIEMQEESTHTEQSESDSGRQPASESMEMSDDETEKDRTGKQDLDLRQYQLEL
AENAVKQRNTIICAPTGSGKTRVALYIVKDHLEKQAEAEADGKSKRKVVFLARTVPLVTQ
QYKTFCQFLGDKKYKILKLSGEDERSKLLHQLLDDIDIIVMTPMILENQMKDAKIKSLSV
FSLIVLDECHHTRKGEPYNKLMIRYLKQKSKQKSKRLPQIVGLTASLGVEKATVDEEAID
NILKLCANMDAPYLSTVQAHIDELQEKVPVPDEKKVKLTENRLDHARKELENAMKTIEDQ
LIDINDLNNRKIDNLLMKRPTKRNSQSYGQWAVQLRNEARLVQTGTYSSHDRDIEPRKTE
MARGIFEMADQLFKYNAALEIHEYVRIYDVVDYLQKELNIMEPRQNESRTDEELSKIFTS
LKKKLIRYEQKRKDDPKFDNPNLKVLAKTLTDLLEAKGSDSRAIIFVRTRATCYALTNWL
NEDERIDPQLKDLKAMAFTGAGANEEEGGMTQNEQDKVIAKFKSGQVKLIVATSVAEEGL
DIPECNIVLKYNHVGNEITTLQTRGRSRKAGGTSVLLGCDKTQQKETLNLARAAMMERAV
REILKMPFDRIQRRISKQQEEILLKEATKEVVQQHQLQQKLQKRFILKCGSCKSFCAHSK
DLRVINDNQHVVIDREFEGRIEVRQFGEPKKPFDGITMTGRMQCKVCRREWGVMFLYQQV
SFHSLGIKHFIVVDEETNQPKYYKKWFELPYTIRNISTEDFKTRFGPGDDCRSDEEEEG
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcaaggtgccggaagaaacacagacctctttgacgtatcagatcggtatgatc
gagatctgtcgcagcacatttgagaaatacctcaggccagctacagttctagataacatg
gatttagaggctacaatgaaagaaaggatccgtgctcaagagtccctggagcggcagaag
gctgtgacaacactattggaagctgtccttggtgatccagagaaaaacgtgccactattc
atatatgcactgagacaaacaggatttgaacatttcttcgacgtatttgaagaggataca
agcaatgcagaaagcaacacaaaagctgcgagatatgagatgttcattctcatgttagag
ggcgaactcaaggacaagatcattccgacagagatcattgatgacctgaagccaatactc
agtgacagagactacgagctgattcgcaacttggagaccgaacgaagtgcccacgatgcc
tgtcaggagctgttcctggccatgccgaggaaaaccccccgctggtctctgcattttatg
aatgctctgtacaaggcctatggctcacagttcactgacaaaattcataacgtgtctgat
agtgatgagacgggttcaagtggagactcgggagaagaaagtggtgatggagaagcatca
acagtgagtgactgtgtcatgtcaacaagaactcaacagcaaactgtagcaaaagtgcct
gttgcagaagtctttgtgcctgatattgagatgcaggaggagtccacacacacagagcag
agcgaatcggattcggggaggcagccagcttccgagtccatggagatgtctgatgatgaa
actgagaaagaccggaccggtaaacaagacctggacctccgccaataccagttagagctt
gctgagaatgcagtaaaacaacgcaacaccatcatttgtgccccaactggttcaggcaag
actcgagttgcactctacatcgtcaaagatcaccttgaaaagcaagctgaagctgaggct
gatggtaagagtaaaaggaaggtggtgttcctggcacgcacagtccctctagttactcaa
cagtacaaaaccttctgtcaattccttggtgataaaaagtacaagattttaaagttgagt
ggcgaggatgagagaagcaagctcctccaccagttactggacgacattgacatcattgtg
atgacaccgatgattctggagaaccagatgaaggatgccaagatcaagtcgctgtctgtg
ttcagccttattgtgttggatgagtgccatcacacacggaaaggggagccatacaacaaa
ctcatgatcagatatctcaagcagaaaagcaagcagaaatcaaaacgtctacctcagatt
gtaggcctgacagcttcactgggtgtagagaaggcaacagttgatgaggaggccattgac
aatatcctgaaactatgtgccaacatggatgccccttatctctccactgtgcaggcacac
atagatgaactccaagaaaaggtcccagtgccagatgaaaaaaaggttaagttaactgaa
aacaggctggaccatgcacggaaagaactggagaatgcaatgaagacaatagaggaccaa
ctgattgacatcaatgatctgaataacagaaaaattgacaacttgctaatgaagcgcccc
actaaacgcaatagccagtcatacggtcagtgggctgtccagctgaggaatgaggccaga
ttggtccagacgggaacatacagcagccacgacagggacatagagcctagaaaaactgag
atggcaaggggcatatttgaaatggccgatcagctgtttaaatacaatgcagcgttggaa
atccatgagtatgttcggatctatgatgtagtggactacctgcagaaggagctcaatatc
atggagccgaggcagaatgaaagcaggacagacgaggaactgtccaagattttcacaagt
ttgaaaaagaaactgatccgttatgaacaaaaaaggaaagatgaccccaagtttgacaac
cccaatttgaaagtgttagccaaaacactgacagatctgctggaggcaaaaggcagtgac
tccagagccatcatatttgtgagaacccgggccacctgctacgctctgaccaactggctc
aatgaagacgaaaggattgacccccagctgaaagatcttaaagccatggccttcactgga
gctggagcaaacgaggaggaaggaggaatgacacagaatgaacaagacaaagtgattgcc
aagttcaagagtggtcaagtcaagttgattgtcgccacatcagtggcagaggaaggactg
gatatcccagaatgcaacattgtcctgaagtacaaccatgttggcaatgaaatcacaact
ctccagacccgaggaagaagcaggaaagctggaggcacctctgttctgttgggctgcgac
aagacacagcagaaagaaacgctcaatcttgcccgtgctgccatgatggaaagagctgtc
agggaaatcctaaaaatgccatttgatcgcatccaacgcagaatcagcaaacaacaggaa
gagatcctgcttaaagaggctacaaaggaagttgtccagcaacatcaacttcaacaaaag
cttcaaaaaagatttatactgaaatgtggaagctgtaaaagtttttgtgcccatagcaaa
gatctgagggtcattaatgataaccaacatgtcgtcattgacagagagtttgaaggacgt
attgaggtcagacaattcggagagcccaaaaaaccttttgatggaataactatgacaggg
agaatgcagtgtaaggtgtgccgaagggagtggggggtcatgtttctttaccagcaggtc
tcgttccactcactggggatcaagcacttcatcgttgttgatgaagaaacgaatcaaccc
aagtactacaagaaatggttcgagctcccttacaccatcaggaatatatccacagaggat
ttcaagacacgttttggacctggcgatgattgcagatctgatgaggaggaagaggggtag
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integrated database retrieval system
