Haliotis rubra (blacklip abalone): 124253643
Help
Entry
124253643 CDS
T07967
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124253643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124253643
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124253643
mRNA cycle factors
Common to processing body (P body) and stress granule
124253643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
COA8
Motif
Other DBs
NCBI-GeneID:
124253643
NCBI-ProteinID:
XP_046543409
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MTTVAQILRQADTLKVTLSESGKTISELWVSRQRLEDLYKKLLLLDLEYALDKKVEQDLW
NHAFKNQINILQIQAKDKQNVKRGENQASLNLFLETASGFYLQFLQQICTTFKLDLPFRR
KSSAFGVMKEKCSVKNKITTPKKSSCLYVCQHCLVHLGDIARYRQQVEQAQTFYRHAANL
VPQNGQPYNQLAILEAARGNKLSTVFYYIRSLAVRHPFPVAATNLEKFYVKLTRDIGDVR
GKLSLSEVVNSLLQFTALIHLTTDLNKAQSLRDHLLTSLPSHVTSQSLTSTVLLQMVAII
VFTLSHAQKNIGDQDGEDTQYSREEELCLELITSFTLSVLDVLLQATPKQEQKAREFFTL
TPIKVLLDWLHLNPHAFRKPQLTESSLWMGLAKLLNSIQSVGDKENPTDMSKFDDIPLPE
DCDLRCFQPIEKAHSGYSFSRVPVDGLQLMLQIEIRCHRLLNHGKWLAQQVVGMNLLNCT
TLKSGRLQFTTPSIHVRTAETHTTTGSERKFGRQNVAIQAIIQKKGDHEESESRLLTKQF
PSTEKDTKGLSQTSSGQSSPKYLLGIPTSEPQFMKHGSVKTVPNQPLYQRYPSPTIQQQP
SSLAGPGKFVPMPRASPSPQVQSNYTGSTAATTNVQLSHMHEQFNTKGHSPPPMQKQPGA
SSVSQGLSHHTPSPRLPYPQIDMFRMQSPRPGLPQNVTAADTPTLPLSPAAQQQLRAALA
QAPIPGQPFHNMSPSQLLQVMKLANQMMTTAKQTNLNSPPSQQSTFSQAPGTERVQTSPK
AQTQHSASPRMPNFPTFSGTPGYSNVTGAPMRPPPSYGTSNIAPLHKDPGQHPLNAGMYG
GFNPRTIQPPTPVMMEARHTSTFQGHAEGTPKPETFNSDRRDGQNGGGKGVPQPRTYSLF
SSSPWEVPSLAGGEPRSLGSSPFSSASSSIRNSPDPEIVQAGQTTFDVCYSVPDVTRTGG
SPSTLGTDITHHQQYSQGNLQSIWSTSGPSPLERLLEQQKQQRQGDPH
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagtagcccagattctgagacaagcagataccttgaaggtgactctgtcagaa
tcagggaagacaatttctgagttgtgggtgagtcgacagcgtctggaggacctgtacaag
aagctgctcctgctggaccttgaatatgccttggacaaaaaggtggaacaggatctgtgg
aaccatgcctttaagaaccagattaatatattgcaaatacaagccaaggacaaacagaac
gtgaagcgtggagaaaatcaggccagcttgaatcttttcttagagactgccagtggattc
tatttgcagtttctacaacaaatatgtacaaccttcaagctggacttaccattcaggcgc
aagtcatctgcctttggtgtgatgaaagagaagtgttccgtgaagaacaagataaccaca
cctaaaaagagttcctgtctatatgtgtgtcagcactgtttagtgcatctgggcgatata
gcccggtatcgacagcaagttgaacaagcacaaacgttctacaggcacgctgccaatctt
gtaccacagaatggacaaccctacaaccagctagcaatattggaagcagctcgaggcaac
aagctgtccactgttttctactacatacggagtctagcagtacgacatccattccctgtg
gctgccacaaacctggagaagttttatgtcaagctcacaagagatattggagatgtacgt
gggaaactgtccttaagtgaagtggttaactcccttttgcagttcactgcactgattcac
ttgactacagatcttaacaaagcacagagtctacgggatcacttgttaacaagcctaccg
tcgcatgtgacatcacagagccttacaagtactgtgctgctgcagatggtggcaattatt
gtgttcactctcagccatgcacagaagaacatcggggatcaggatggagaagacactcaa
tacagtagggaagaggaactttgcctagaactcatcacatctttcacattgagtgttctg
gatgtcttgttgcaagcaactcctaaacaggagcagaaagcaagagagttcttcaccctc
actcccatcaaagttctacttgattggcttcacctcaatcctcatgcattccggaaacca
cagctgactgaatcaagtttgtggatgggactggcaaagcttctgaacagcatccagtca
gttggagacaaggagaacccaactgatatgtcaaaatttgacgatatccctttacctgaa
gactgtgatctgcgctgctttcagccaatagagaaagcccacagtggctacagcttcagt
cgagtcccagttgatggacttcagctcatgttgcagatagaaataagatgtcatcgcttg
cttaatcatggtaaatggttggctcagcaagttgtgggaatgaatttactgaactgcaca
actttaaaatctggacgtcttcaattcacaacaccaagtattcatgtgagaacagctgaa
acacacacaactactggaagtgaaaggaagtttggacgacaaaatgtagctatacaggct
attattcagaagaagggagatcatgaagaaagtgaatccagactcttgaccaaacagttt
ccgtctactgaaaaggacaccaaaggcctctcacagacgtcatctggacaatcatcacca
aagtatctactgggcatccccacaagtgaacctcagtttatgaagcatggtagtgtgaag
acagttcctaaccaaccattatatcagagatacccatctccaacaattcagcagcagcct
tcttctttagctggccctggaaagtttgtgcctatgccccgggctagcccttctccacaa
gtccaaagtaattacacaggcagtacagcagctacaactaatgtacaactgtcccacatg
catgaacaatttaacactaaaggccactcaccaccaccaatgcaaaagcagccaggtgct
tccagtgtttcacagggcctttctcatcatactccatcaccaagactgccatatccacag
atagacatgttcagaatgcaatcaccaagacctggtctaccacaaaatgtgacagcagca
gatactccaacactaccgctgtcaccagcagcacagcagcagttgcgagcagctttggca
caagcacctattcctgggcagcctttccataacatgtcacccagtcagttactccaagtt
atgaagctagctaaccagatgatgacaactgcaaaacagacaaacttaaacagtcctcca
agtcaacaatctacattttctcaggctcctggaacagaaagagttcaaacatcccctaag
gctcagacacaacactctgcatcaccaaggatgccaaattttcctaccttttcgggaaca
cctggatactcaaatgtcacaggggcaccaatgagaccaccaccttcatatggaacatca
aacattgcccctctccataaagatcctggtcagcatccattgaatgccgggatgtatgga
ggtttcaatccacgtacgatacagcctcctactcctgtcatgatggaagcaagacacact
tcaacatttcaaggtcatgctgaaggtacaccaaaacctgagacgttcaattcagacagg
agagatggtcagaatggaggaggaaaaggagtgcctcagccacgaacatactcgcttttt
agtagttctccgtgggaagtaccatctttggctggtggagaacctcgtagtttaggttct
tcccctttctcatcagcttcaagcagcatcagaaactccccagatcctgaaattgtgcaa
gcaggccagacaacttttgatgtatgctatagtgtacctgatgttacacgcacaggaggc
tcccccagcactcttggtacagacattacacaccaccagcagtacagtcaagggaactta
cagtcaatatggtcaacatcaggtccatcaccacttgaacggctacttgaacaacagaaa
cagcagcgacaaggtgatcctcattag
DBGET
integrated database retrieval system