KEGG   Haliotis rubra (blacklip abalone): 124253643
Entry
124253643         CDS       T07967                                 
Name
(RefSeq) protein SMG7-like
  KO
K14409  protein SMG7
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124253643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrj03019]
    124253643
Messenger RNA biogenesis [BR:hrj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     124253643
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124253643
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2 COA8
Other DBs
NCBI-GeneID: 124253643
NCBI-ProteinID: XP_046543409
LinkDB
Position
Unknown
AA seq 1008 aa
MTTVAQILRQADTLKVTLSESGKTISELWVSRQRLEDLYKKLLLLDLEYALDKKVEQDLW
NHAFKNQINILQIQAKDKQNVKRGENQASLNLFLETASGFYLQFLQQICTTFKLDLPFRR
KSSAFGVMKEKCSVKNKITTPKKSSCLYVCQHCLVHLGDIARYRQQVEQAQTFYRHAANL
VPQNGQPYNQLAILEAARGNKLSTVFYYIRSLAVRHPFPVAATNLEKFYVKLTRDIGDVR
GKLSLSEVVNSLLQFTALIHLTTDLNKAQSLRDHLLTSLPSHVTSQSLTSTVLLQMVAII
VFTLSHAQKNIGDQDGEDTQYSREEELCLELITSFTLSVLDVLLQATPKQEQKAREFFTL
TPIKVLLDWLHLNPHAFRKPQLTESSLWMGLAKLLNSIQSVGDKENPTDMSKFDDIPLPE
DCDLRCFQPIEKAHSGYSFSRVPVDGLQLMLQIEIRCHRLLNHGKWLAQQVVGMNLLNCT
TLKSGRLQFTTPSIHVRTAETHTTTGSERKFGRQNVAIQAIIQKKGDHEESESRLLTKQF
PSTEKDTKGLSQTSSGQSSPKYLLGIPTSEPQFMKHGSVKTVPNQPLYQRYPSPTIQQQP
SSLAGPGKFVPMPRASPSPQVQSNYTGSTAATTNVQLSHMHEQFNTKGHSPPPMQKQPGA
SSVSQGLSHHTPSPRLPYPQIDMFRMQSPRPGLPQNVTAADTPTLPLSPAAQQQLRAALA
QAPIPGQPFHNMSPSQLLQVMKLANQMMTTAKQTNLNSPPSQQSTFSQAPGTERVQTSPK
AQTQHSASPRMPNFPTFSGTPGYSNVTGAPMRPPPSYGTSNIAPLHKDPGQHPLNAGMYG
GFNPRTIQPPTPVMMEARHTSTFQGHAEGTPKPETFNSDRRDGQNGGGKGVPQPRTYSLF
SSSPWEVPSLAGGEPRSLGSSPFSSASSSIRNSPDPEIVQAGQTTFDVCYSVPDVTRTGG
SPSTLGTDITHHQQYSQGNLQSIWSTSGPSPLERLLEQQKQQRQGDPH
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgaccacagtagcccagattctgagacaagcagataccttgaaggtgactctgtcagaa
tcagggaagacaatttctgagttgtgggtgagtcgacagcgtctggaggacctgtacaag
aagctgctcctgctggaccttgaatatgccttggacaaaaaggtggaacaggatctgtgg
aaccatgcctttaagaaccagattaatatattgcaaatacaagccaaggacaaacagaac
gtgaagcgtggagaaaatcaggccagcttgaatcttttcttagagactgccagtggattc
tatttgcagtttctacaacaaatatgtacaaccttcaagctggacttaccattcaggcgc
aagtcatctgcctttggtgtgatgaaagagaagtgttccgtgaagaacaagataaccaca
cctaaaaagagttcctgtctatatgtgtgtcagcactgtttagtgcatctgggcgatata
gcccggtatcgacagcaagttgaacaagcacaaacgttctacaggcacgctgccaatctt
gtaccacagaatggacaaccctacaaccagctagcaatattggaagcagctcgaggcaac
aagctgtccactgttttctactacatacggagtctagcagtacgacatccattccctgtg
gctgccacaaacctggagaagttttatgtcaagctcacaagagatattggagatgtacgt
gggaaactgtccttaagtgaagtggttaactcccttttgcagttcactgcactgattcac
ttgactacagatcttaacaaagcacagagtctacgggatcacttgttaacaagcctaccg
tcgcatgtgacatcacagagccttacaagtactgtgctgctgcagatggtggcaattatt
gtgttcactctcagccatgcacagaagaacatcggggatcaggatggagaagacactcaa
tacagtagggaagaggaactttgcctagaactcatcacatctttcacattgagtgttctg
gatgtcttgttgcaagcaactcctaaacaggagcagaaagcaagagagttcttcaccctc
actcccatcaaagttctacttgattggcttcacctcaatcctcatgcattccggaaacca
cagctgactgaatcaagtttgtggatgggactggcaaagcttctgaacagcatccagtca
gttggagacaaggagaacccaactgatatgtcaaaatttgacgatatccctttacctgaa
gactgtgatctgcgctgctttcagccaatagagaaagcccacagtggctacagcttcagt
cgagtcccagttgatggacttcagctcatgttgcagatagaaataagatgtcatcgcttg
cttaatcatggtaaatggttggctcagcaagttgtgggaatgaatttactgaactgcaca
actttaaaatctggacgtcttcaattcacaacaccaagtattcatgtgagaacagctgaa
acacacacaactactggaagtgaaaggaagtttggacgacaaaatgtagctatacaggct
attattcagaagaagggagatcatgaagaaagtgaatccagactcttgaccaaacagttt
ccgtctactgaaaaggacaccaaaggcctctcacagacgtcatctggacaatcatcacca
aagtatctactgggcatccccacaagtgaacctcagtttatgaagcatggtagtgtgaag
acagttcctaaccaaccattatatcagagatacccatctccaacaattcagcagcagcct
tcttctttagctggccctggaaagtttgtgcctatgccccgggctagcccttctccacaa
gtccaaagtaattacacaggcagtacagcagctacaactaatgtacaactgtcccacatg
catgaacaatttaacactaaaggccactcaccaccaccaatgcaaaagcagccaggtgct
tccagtgtttcacagggcctttctcatcatactccatcaccaagactgccatatccacag
atagacatgttcagaatgcaatcaccaagacctggtctaccacaaaatgtgacagcagca
gatactccaacactaccgctgtcaccagcagcacagcagcagttgcgagcagctttggca
caagcacctattcctgggcagcctttccataacatgtcacccagtcagttactccaagtt
atgaagctagctaaccagatgatgacaactgcaaaacagacaaacttaaacagtcctcca
agtcaacaatctacattttctcaggctcctggaacagaaagagttcaaacatcccctaag
gctcagacacaacactctgcatcaccaaggatgccaaattttcctaccttttcgggaaca
cctggatactcaaatgtcacaggggcaccaatgagaccaccaccttcatatggaacatca
aacattgcccctctccataaagatcctggtcagcatccattgaatgccgggatgtatgga
ggtttcaatccacgtacgatacagcctcctactcctgtcatgatggaagcaagacacact
tcaacatttcaaggtcatgctgaaggtacaccaaaacctgagacgttcaattcagacagg
agagatggtcagaatggaggaggaaaaggagtgcctcagccacgaacatactcgcttttt
agtagttctccgtgggaagtaccatctttggctggtggagaacctcgtagtttaggttct
tcccctttctcatcagcttcaagcagcatcagaaactccccagatcctgaaattgtgcaa
gcaggccagacaacttttgatgtatgctatagtgtacctgatgttacacgcacaggaggc
tcccccagcactcttggtacagacattacacaccaccagcagtacagtcaagggaactta
cagtcaatatggtcaacatcaggtccatcaccacttgaacggctacttgaacaacagaaa
cagcagcgacaaggtgatcctcattag

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