KEGG   Haliotis rubra (blacklip abalone): 124253848
Entry
124253848         CDS       T07967                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124253848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hrj03041]
    124253848
   03036 Chromosome and associated proteins [BR:hrj03036]
    124253848
Spliceosome [BR:hrj03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    124253848
 Complex B
    124253848
 Complex C
   U2 SnRNP specific factors
    124253848
Chromosome and associated proteins [BR:hrj03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    124253848
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT Htt_N-HEAT_1 HEAT_2 Vac14_Fab1_bd XMAP215_CLASP_TOG UME DUF2298 UNC45-central
Other DBs
NCBI-GeneID: 124253848
NCBI-ProteinID: XP_046543655
LinkDB
Position
Unknown
AA seq 1337 aa
MAATTREEIEEQVRSIQAKKAQLTVAPTNEDDCERVGLGAEGHYDVDIYDSNKFSGYVTS
IAATDEPDDYEDVGAAFPKRSSYTAPLNLLHETANDKDYDPLADHRVSKIADRETEYQAR
RRQMIISPERYDPFADGGKTPDPKLQARTFSDVMTELQLGKEQAGLRQQMHEKAKAGELR
AVNGAGGDAGHKQPTKRKRWDQSSAQEDAPSKKKTSSWDAAEAVTPSNSRWDETPGRAKG
EQTPGATPGQSTRQWDSTPGHATPGATTPGRDTPGHQATPSARRNRWDETPKTERDTPGH
GSGWAETPRTDRGGDLIETTPTPGASKRRSRWDETPGATPGGMTPNMTPGGMTPTMTPGG
HTPTMTPGGMTPGQTPGGHTPGGFTPSGATPTGQKAMAMATPTPGHLMSMTPEQLQAYTW
QREIDERNRPLSDDELDSMFPPGYKVGAESPAGYIPIRNTARKLIATPTPDGWHPWLPDA
DPDTKTQIVDMQPKGNLPMMKPGDMQYXDKLLVDVDEESLTPEEQKERKIMKLLLKIKNG
TPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLV
RPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNT
TARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKNLV
EIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFL
KAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIK
DEILPAFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAAEIVGRVVDDLKDEAEQYRKM
VMETIEKIMSNLGAADIDSRLEEQLIDGILYSFQEQTTEDVVMLNGFGTVVNALGKRVKP
YLPQICGTILWRLNNKSAKVRQQAADLISRIAIVMKTCQEEKLMGHLGVVLYEYLGEEYP
EVLGSILGALKGIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGA
EFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQ
NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFMFEYIGEMGKDYIY
AVSPLFEDALMDRDLVHRQTSMAAIQHMALGVYGFGCEDALTHLLNYVWPNIFETSPHVV
QAFMGAVEGLRVAIGPSKILQYAMQGLFHPARKVRDVYWKVYNTVYIGAQDGMIPAYPRI
PNDAKNQYIRYELDYIL
NT seq 4014 nt   +upstreamnt  +downstreamnt
atggctgcaacaacaagagaagagattgaagagcaggtgagaagtatccaggccaagaaa
gcacaactaactgtagccccaactaatgaagatgattgtgaaagagttggacttggggca
gaaggacattatgatgtggatatctatgattctaacaaattttctggatacgtcacatcg
attgctgccacagatgaaccagatgactatgaagatgtaggagctgcatttcctaagcgg
tcaagttacactgcaccgttgaacttacttcacgaaacagcaaatgacaaggattatgat
ccgctggcagatcatcgggtgtcaaagattgccgaccgtgaaactgaataccaagcccga
cgacgtcagatgattatttcgccagagagatatgatccatttgctgacggaggcaagaca
cctgatccaaagttacaagcaagaaccttctcagatgttatgacagaattgcagctcggc
aaagaacaggccgggctgcgtcagcagatgcatgagaaggctaaggcaggagaactacgg
gctgtcaatggagcgggaggcgatgctggccacaaacaacccacaaagaggaaacgttgg
gaccagtcctccgcccaggaagatgctcccagcaagaagaaaacctcatcctgggatgct
gcagaagctgttaccccatctaacagccgatgggatgaaactcctggcagagccaaaggg
gaacaaacccccggtgccactccaggccaaagcaccagacagtgggattcgaccccaggt
cacgccacccccggtgcgaccacaccaggcagagacacccctggccaccaagccacgcca
agtgcaagaagaaacagatgggatgagacacctaaaactgagagagatacccctggtcat
ggcagcggttgggcagaaacccctcgaacagacagaggcggtgacttgatcgagaccaca
ccaacgccaggagcaagcaaacgccgttcaagatgggacgagacacctggagccacgcct
ggtggtatgacccctaacatgaccccaggaggaatgaccccaaccatgacccctgggggt
cacacccccaccatgacaccaggaggaatgactcctggacaaacgcccggcggtcacaca
ccaggtggcttcactccaagtggtgccacacccactggtcagaaagccatggccatggcc
actccaactcctggtcatcttatgtccatgactccagaacagttgcaggcatacacatgg
cagcgggaaattgatgaaagaaatcggccgctgtcagatgacgaactggactccatgttc
ccaccaggctacaaggtaggtgctgaatccccggcaggttacataccaatcagaaacacg
gccaggaagctgattgccacacccacccccgatggctggcacccctggcttccggatgca
gacccggacactaagacacagattgtagacatgcagcccaaaggcaatctgcctatgatg
aagccaggcgacatgcagtacnncgacaagctattggtggatgtagatgaagagtcgctg
acgccggaagaacagaaggaaagaaagatcatgaagctgctcctcaaaataaagaatggc
acgcctccaatgagaaaggctgctctgcgtcagatcacagacaaggcccgtgagtttggt
gccggtcctctgttcaatcaaatcctaccactgttgatgtctccgaccttggaagaccag
gaacgtcatttgctggtgaaggtcattgaccgaatcctgtacaaactggacgatctggtc
cgaccctacgtacacaagatccttgtggtcattgagcctcttcttattgatgaggactac
tacgctcgtgttgaagggagagaaattatctcaaatttggctaaggctgctggtctggcc
accatgatctccacgatgagacctgacatcgacaacatggacgagtatgtccgtaatacc
actgctcgagcctttgctgttgtggcgtctgctctcggcatcccgtctctgctgcctttc
ctgaaggctgtgtgcaagagtaagaagtcctggcaagccagacatactggtatcaagatt
gtacagcagatagccatcctcatgggctgtgccatacttccccatctcaagaacttggtg
gagattatcgaacatggcttggtcgatgagcagcagaaggtgcgaaccatcactgccctg
gctttggctgctttggctgaagctgccacaccatatgggattgaatcttttgacagtgtc
ctcaaacctctctggaagggtattcgtcaacacagaggaaagggtctagcagccttcctg
aaggctattggctacctgatccccctcatggacgctgagtacgccaactactacaccagg
gaagtgatgttgatcctcatccgagagttccagtctcctgatgaagaaatgaaaaagatt
gtacttaaggttgtgaaacagtgctgtgcgaccgatggtgttgaaccccagtacatcaaa
gatgagattctacctgctttcttcaaacacttctggaatcagagaatggctcttgatagg
aggaactacagacagctggtggacacaaccgttgagattgccaacaaggttggggcagca
gagattgttggccgagtcgttgatgatctgaaggacgaggctgagcagtaccgtaagatg
gtcatggagaccatcgagaagatcatgtcgaatctcggagctgccgacatagattcacgg
ctggaagaacagctgattgacggtatcctgtactccttccaggaacagaccactgaggac
gtggttatgttgaatggttttggcacagtggtcaatgcactcggcaagcgggtgaagccc
tatctgccccagatctgtggtactattctctggcgtctcaacaataagtcagcgaaagtt
cgacagcaggcagctgatctcatctcccggatagccattgttatgaagacttgtcaggag
gagaaactgatggggcatttgggtgtggtgttgtacgaatacttgggagaagaataccct
gaggttctaggctcaatcctgggagctctcaagggcattgtcaatgtcatcggtatgacc
aagatgacgcctccgatcaaggatctcttgcctaggctcacgccaatcctcaagaacaga
catgagaaggtacaggagaactgtattgatctggttggacgtattgctgaccgtggagca
gagtttgtctcggctagggaatggatgagaatctgctttgagctgttggagttactcaag
gctcacaagaaggccatcaggagagccactgtgaacaccttcggctacattgccaaggct
attggcccacatgatgtgttggcgaccctcctgaacaacttgaaggtgcaggagagacaa
aacagagtctgtacgacagttgccatcgccattgttgccgagacatgttcccccttcact
gtgctgccggccctgatgaatgaataccgtgtgcccgagttgaacgtccagaacggtgta
ctcaagtctctgtccttcatgtttgaatacattggagaaatggggaaggactacatctat
gctgtatcacctctgtttgaagatgctctcatggacagagatttggtacacaggcagaca
tccatggcagcaatccagcacatggctcttggtgtttacggctttggatgcgaggatgca
ctcacacatctcctcaactatgtctggcccaatatctttgaaacctcccctcatgtcgtg
caggctttcatgggggcagtggaagggctcagggtggccattgggccgtccaaaatactt
caatatgccatgcagggcctgttccatcctgctcggaaggttcgggacgtctactggaag
gtgtacaacacagtgtatatcggggcacaagatggaatgattccggcctatcccagaatc
cccaacgatgccaagaaccagtacatccgatacgaactggactacatcttatag

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